RNA–Protein interactions for RNA: ENST00000426538.6

GINS3-203, Transcript of GINS complex subunit 3, humanhuman

TSL 1 (best) BASIC

Gene GINS3, Length 1,728 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GINS3-203ENST00000426538 KIF11P52732 1056 aa16.26■□□□□ 0.19
GINS3-203ENST00000426538 UBXN11Q5T124 520 aa16.26■□□□□ 0.19
GINS3-203ENST00000426538 VPS36Q86VN1 386 aa16.26■□□□□ 0.19
GINS3-203ENST00000426538 HACE1Q8IYU2 909 aa16.26■□□□□ 0.19
GINS3-203ENST00000426538 ACRBPQ8NEB7 543 aa16.26■□□□□ 0.19
GINS3-203ENST00000426538 CAGE1Q8TC20 777 aa16.26■□□□□ 0.19
GINS3-203ENST00000426538 U2AF1L4Q8WU68 220 aaKnown RBP16.26■□□□□ 0.19
GINS3-203ENST00000426538 KIF12Q96FN5 646 aa16.26■□□□□ 0.19
GINS3-203ENST00000426538 ZNF333Q96JL9 665 aa16.26■□□□□ 0.19
GINS3-203ENST00000426538 PPP1R13BQ96KQ4 1090 aa16.26■□□□□ 0.19
GINS3-203ENST00000426538 EIF3CQ99613 913 aaKnown RBP16.26■□□□□ 0.19
GINS3-203ENST00000426538 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.26■□□□□ 0.19
GINS3-203ENST00000426538 GPR88Q9GZN0 384 aa16.26■□□□□ 0.19
GINS3-203ENST00000426538 AGO3Q9H9G7 860 aaKnown RBP16.26■□□□□ 0.19
GINS3-203ENST00000426538 IPPQ9Y573 584 aa16.26■□□□□ 0.19
GINS3-203ENST00000426538 RECQL4O94761 1208 aa16.25■□□□□ 0.19
GINS3-203ENST00000426538 PNMA6AP0CW24 399 aaPredicted RBP16.25■□□□□ 0.19
GINS3-203ENST00000426538 TBXAS1P24557 533 aaPredicted RBP16.25■□□□□ 0.19
GINS3-203ENST00000426538 AKAP5P24588 427 aa16.25■□□□□ 0.19
GINS3-203ENST00000426538 CD52P31358 61 aa16.25■□□□□ 0.19
GINS3-203ENST00000426538 NOP14P78316 857 aaKnown RBP16.25■□□□□ 0.19
GINS3-203ENST00000426538 LPIN1Q14693 890 aa16.25■□□□□ 0.19
GINS3-203ENST00000426538 DNTTIP2Q5QJE6 756 aaKnown RBP16.25■□□□□ 0.19
GINS3-203ENST00000426538 KAT5Q92993 513 aa16.25■□□□□ 0.19
GINS3-203ENST00000426538 ELMO3Q96BJ8 720 aa16.25■□□□□ 0.19
GINS3-203ENST00000426538 SNX27Q96L92 541 aa16.25■□□□□ 0.19
GINS3-203ENST00000426538 KREMEN1Q96MU8 473 aa16.25■□□□□ 0.19
GINS3-203ENST00000426538 DERAQ9Y315 318 aa16.25■□□□□ 0.19
GINS3-203ENST00000426538 PCDHB2Q9Y5E7 798 aa16.25■□□□□ 0.19
GINS3-203ENST00000426538 CITO14578 2027 aa16.25■□□□□ 0.19
GINS3-203ENST00000426538 MEFVO15553 781 aaPredicted RBP16.25■□□□□ 0.19
GINS3-203ENST00000426538 ASS1P00966 412 aaKnown RBP16.25■□□□□ 0.19
GINS3-203ENST00000426538 MYL6P60660 151 aa16.25■□□□□ 0.19
GINS3-203ENST00000426538 PTK2Q05397 1052 aa16.25■□□□□ 0.19
GINS3-203ENST00000426538 BFSP2Q13515 415 aa16.25■□□□□ 0.19
GINS3-203ENST00000426538 SPOPLQ6IQ16 392 aa16.25■□□□□ 0.19
GINS3-203ENST00000426538 SHC3Q92529 594 aa16.25■□□□□ 0.19
GINS3-203ENST00000426538 TAF4BQ92750 862 aa16.25■□□□□ 0.19
GINS3-203ENST00000426538 JAKMIP2Q96AA8 810 aa16.25■□□□□ 0.19
GINS3-203ENST00000426538 CRISPLD2Q9H0B8 497 aa16.25■□□□□ 0.19
GINS3-203ENST00000426538 ERVK-5Q9HDB9 667 aa16.25■□□□□ 0.19
GINS3-203ENST00000426538 FAM105AQ9NUU6 356 aa16.25■□□□□ 0.19
GINS3-203ENST00000426538 DPP3Q9NY33 737 aa16.25■□□□□ 0.19
GINS3-203ENST00000426538 ANK1P16157 1881 aa16.24■□□□□ 0.19
GINS3-203ENST00000426538 TLR3O15455 904 aaKnown RBP16.24■□□□□ 0.19
GINS3-203ENST00000426538 ITGB3P05106 788 aa16.24■□□□□ 0.19
GINS3-203ENST00000426538 CUL2Q13617 745 aa16.24■□□□□ 0.19
GINS3-203ENST00000426538 PTPN14Q15678 1187 aa16.24■□□□□ 0.19
GINS3-203ENST00000426538 ZNF699Q32M78 642 aa16.24■□□□□ 0.19
GINS3-203ENST00000426538 ALKAL1Q6UXT8 129 aa16.24■□□□□ 0.19
GINS3-203ENST00000426538 KIAA1328Q86T90 577 aa16.24■□□□□ 0.19
GINS3-203ENST00000426538 REXO1L1PQ8IX06 675 aa16.24■□□□□ 0.19
GINS3-203ENST00000426538 FAM126BQ8IXS8 530 aa16.24■□□□□ 0.19
GINS3-203ENST00000426538 C1orf127Q8N9H9 656 aa16.24■□□□□ 0.19
GINS3-203ENST00000426538 SMG8Q8ND04 991 aaKnown RBP16.24■□□□□ 0.19
GINS3-203ENST00000426538 C16orf45Q96MC5 204 aaPredicted RBP16.24■□□□□ 0.19
GINS3-203ENST00000426538 TSPAN18Q96SJ8 248 aa16.24■□□□□ 0.19
GINS3-203ENST00000426538 LUC7LQ9NQ29 371 aaKnown RBP16.24■□□□□ 0.19
GINS3-203ENST00000426538 CNTN3Q9P232 1028 aa16.24■□□□□ 0.19
GINS3-203ENST00000426538 ADAMTS1Q9UHI8 967 aa16.24■□□□□ 0.19
GINS3-203ENST00000426538 ITGA11Q9UKX5 1188 aa16.24■□□□□ 0.19
GINS3-203ENST00000426538 NUB1Q9Y5A7 615 aa16.24■□□□□ 0.19
GINS3-203ENST00000426538 XPOTO43592 962 aaKnown RBP16.23■□□□□ 0.19
GINS3-203ENST00000426538 HSPA1AP0DMV8 641 aaKnown RBP16.23■□□□□ 0.19
GINS3-203ENST00000426538 HSPA1BP0DMV9 641 aaKnown RBP16.23■□□□□ 0.19
GINS3-203ENST00000426538 KRT5P13647 590 aa16.23■□□□□ 0.19
GINS3-203ENST00000426538 ATICP31939 592 aa16.23■□□□□ 0.19
GINS3-203ENST00000426538 CLCN1P35523 988 aa16.23■□□□□ 0.19
GINS3-203ENST00000426538 RBP5P82980 135 aa16.23■□□□□ 0.19
GINS3-203ENST00000426538 SLC18A3Q16572 532 aa16.23■□□□□ 0.19
GINS3-203ENST00000426538 ASTE1Q2TB18 679 aaPredicted RBP16.23■□□□□ 0.19
GINS3-203ENST00000426538 ZNF571Q7Z3V5 609 aaPredicted RBP16.23■□□□□ 0.19
GINS3-203ENST00000426538 FAM71AQ8IYT1 594 aa16.23■□□□□ 0.19
GINS3-203ENST00000426538 BEST2Q8NFU1 509 aa16.23■□□□□ 0.19
GINS3-203ENST00000426538 ARMC5Q96C12 935 aa16.23■□□□□ 0.19
GINS3-203ENST00000426538 RNF39Q9H2S5 420 aa16.23■□□□□ 0.19
GINS3-203ENST00000426538 APOBEC3GQ9HC16 384 aaKnown RBP16.23■□□□□ 0.19
GINS3-203ENST00000426538 KLK14Q9P0G3 267 aa16.23■□□□□ 0.19
GINS3-203ENST00000426538 PQBP1O60828 265 aaKnown RBP16.22■□□□□ 0.19
GINS3-203ENST00000426538 LCA5LO95447 670 aa16.22■□□□□ 0.19
GINS3-203ENST00000426538 CD4P01730 458 aa16.22■□□□□ 0.19
GINS3-203ENST00000426538 ITGA4P13612 1032 aa16.22■□□□□ 0.19
GINS3-203ENST00000426538 ANXA13P27216 316 aa16.22■□□□□ 0.19
GINS3-203ENST00000426538 RAB27AP51159 221 aa16.22■□□□□ 0.19
GINS3-203ENST00000426538 ATN1P54259 1190 aaPredicted RBP16.22■□□□□ 0.19
GINS3-203ENST00000426538 CYP27A1Q02318 531 aa16.22■□□□□ 0.19
GINS3-203ENST00000426538 GFPT1Q06210 699 aaPredicted RBP16.22■□□□□ 0.19
GINS3-203ENST00000426538 BMS1Q14692 1282 aaKnown RBP16.22■□□□□ 0.19
GINS3-203ENST00000426538 ARHGAP29Q52LW3 1261 aa16.22■□□□□ 0.19
GINS3-203ENST00000426538 SLC39A5Q6ZMH5 540 aa16.22■□□□□ 0.19
GINS3-203ENST00000426538 TXLNBQ8N3L3 684 aa16.22■□□□□ 0.19
GINS3-203ENST00000426538 OSBPL7Q9BZF2 842 aa16.22■□□□□ 0.19
GINS3-203ENST00000426538 UBQLN1Q9UMX0 589 aaKnown RBP16.22■□□□□ 0.19
GINS3-203ENST00000426538 AGAP1Q9UPQ3 857 aa16.22■□□□□ 0.19
GINS3-203ENST00000426538 CYP26A1O43174 497 aa16.22■□□□□ 0.19
GINS3-203ENST00000426538 SKIP12755 728 aa16.22■□□□□ 0.19
GINS3-203ENST00000426538 SELPP16109 830 aa16.22■□□□□ 0.19
GINS3-203ENST00000426538 POLR2BP30876 1174 aaKnown RBP16.22■□□□□ 0.19
GINS3-203ENST00000426538 WDR72Q3MJ13 1102 aa16.22■□□□□ 0.19
GINS3-203ENST00000426538 ZNF667Q5HYK9 610 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms