RNA–Protein interactions for RNA: ENST00000425609.1

LINC00400-201, long intergenic non-protein coding RNA 400, humanhuman

TSL 3 BASIC

Gene LINC00400, Length 547 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00400-201ENST00000425609 VPS11Q9H270 941 aa5.83□□□□□ -1.48
LINC00400-201ENST00000425609 ARFGAP3Q9NP61 516 aa5.83□□□□□ -1.48
LINC00400-201ENST00000425609 PNPLA8Q9NP80 782 aa5.83□□□□□ -1.48
LINC00400-201ENST00000425609 CD320Q9NPF0 282 aa5.83□□□□□ -1.48
LINC00400-201ENST00000425609 CNNM1Q9NRU3 951 aa5.83□□□□□ -1.48
LINC00400-201ENST00000425609 COL20A1Q9P218 1284 aa5.83□□□□□ -1.48
LINC00400-201ENST00000425609 ZDHHC8Q9ULC8 765 aa5.83□□□□□ -1.48
LINC00400-201ENST00000425609 MED16Q9Y2X0 877 aa5.83□□□□□ -1.48
LINC00400-201ENST00000425609 PMS2P1A4D2B8 440 aa5.82□□□□□ -1.48
LINC00400-201ENST00000425609 CXorf49A8MYA2 514 aaPredicted RBP5.82□□□□□ -1.48
LINC00400-201ENST00000425609 PIP5K1CO60331 668 aa5.82□□□□□ -1.48
LINC00400-201ENST00000425609 NBNO60934 754 aa5.82□□□□□ -1.48
LINC00400-201ENST00000425609 FGF18O76093 207 aa5.82□□□□□ -1.48
LINC00400-201ENST00000425609 SASH1O94885 1247 aa5.82□□□□□ -1.48
LINC00400-201ENST00000425609 GZMKP49863 264 aa5.82□□□□□ -1.48
LINC00400-201ENST00000425609 HTRA4P83105 476 aaPredicted RBP5.82□□□□□ -1.48
LINC00400-201ENST00000425609 EXOSC9Q06265 439 aaKnown RBP5.82□□□□□ -1.48
LINC00400-201ENST00000425609 MRPL49Q13405 166 aaKnown RBP5.82□□□□□ -1.48
LINC00400-201ENST00000425609 CCDC93Q567U6 631 aa5.82□□□□□ -1.48
LINC00400-201ENST00000425609 ANO1Q5XXA6 986 aa5.82□□□□□ -1.48
LINC00400-201ENST00000425609 HIBCHQ6NVY1 386 aaPredicted RBP5.82□□□□□ -1.48
LINC00400-201ENST00000425609 ATG14Q6ZNE5 492 aa5.82□□□□□ -1.48
LINC00400-201ENST00000425609 LIX1LQ8IVB5 337 aa5.82□□□□□ -1.48
LINC00400-201ENST00000425609 Q8N3U1 123 aa5.82□□□□□ -1.48
LINC00400-201ENST00000425609 TP53I13Q8NBR0 393 aaPredicted RBP5.82□□□□□ -1.48
LINC00400-201ENST00000425609 IL17RDQ8NFM7 739 aa5.82□□□□□ -1.48
LINC00400-201ENST00000425609 OR5M3Q8NGP4 307 aa5.82□□□□□ -1.48
LINC00400-201ENST00000425609 ZSCAN18Q8TBC5 510 aaPredicted RBP5.82□□□□□ -1.48
LINC00400-201ENST00000425609 BRI3BPQ8WY22 251 aa5.82□□□□□ -1.48
LINC00400-201ENST00000425609 NMD3Q96D46 503 aaKnown RBP5.82□□□□□ -1.48
LINC00400-201ENST00000425609 SUCLG2Q96I99 432 aa5.82□□□□□ -1.48
LINC00400-201ENST00000425609 LCORQ96JN0 433 aaPredicted RBP5.82□□□□□ -1.48
LINC00400-201ENST00000425609 SMURF2Q9HAU4 748 aa5.82□□□□□ -1.48
LINC00400-201ENST00000425609 IL23AQ9NPF7 189 aa5.82□□□□□ -1.48
LINC00400-201ENST00000425609 AFF4Q9UHB7 1163 aaKnown RBP5.82□□□□□ -1.48
LINC00400-201ENST00000425609 CDC23Q9UJX2 597 aa5.82□□□□□ -1.48
LINC00400-201ENST00000425609 CNOT6Q9ULM6 557 aaKnown RBP5.82□□□□□ -1.48
LINC00400-201ENST00000425609 ZDHHC9Q9Y397 364 aa5.82□□□□□ -1.48
LINC00400-201ENST00000425609 SLC4A7Q9Y6M7 1214 aa5.82□□□□□ -1.48
LINC00400-201ENST00000425609 A0A1W2PPC4 97 aa5.81□□□□□ -1.48
LINC00400-201ENST00000425609 PARP1P09874 1014 aaKnown RBP5.81□□□□□ -1.48
LINC00400-201ENST00000425609 RAP2AP10114 183 aa5.81□□□□□ -1.48
LINC00400-201ENST00000425609 SLC6A4P31645 630 aa5.81□□□□□ -1.48
LINC00400-201ENST00000425609 HALP42357 657 aa5.81□□□□□ -1.48
LINC00400-201ENST00000425609 PMS2P11Q13670 270 aa5.81□□□□□ -1.48
LINC00400-201ENST00000425609 KIF22Q14807 665 aa5.81□□□□□ -1.48
LINC00400-201ENST00000425609 MYLK4Q86YV6 388 aaPredicted RBP5.81□□□□□ -1.48
LINC00400-201ENST00000425609 NKAPQ8N5F7 415 aaKnown RBP5.81□□□□□ -1.48
LINC00400-201ENST00000425609 SLC35B2Q8TB61 432 aa5.81□□□□□ -1.48
LINC00400-201ENST00000425609 TNPO1Q92973 898 aaKnown RBP5.81□□□□□ -1.48
LINC00400-201ENST00000425609 HERPUD2Q9BSE4 406 aa5.81□□□□□ -1.48
LINC00400-201ENST00000425609 NDC1Q9BTX1 674 aa5.81□□□□□ -1.48
LINC00400-201ENST00000425609 GNL3LQ9NVN8 582 aaKnown RBP5.81□□□□□ -1.48
LINC00400-201ENST00000425609 SMG5Q9UPR3 1016 aaKnown RBP5.81□□□□□ -1.48
LINC00400-201ENST00000425609 NR2E1Q9Y466 385 aa5.81□□□□□ -1.48
LINC00400-201ENST00000425609 CECR2Q9BXF3 1484 aa5.81□□□□□ -1.48
LINC00400-201ENST00000425609 CCDC189A1A4V9 331 aa5.8□□□□□ -1.48
LINC00400-201ENST00000425609 TRIM43BA6NCK2 446 aa5.8□□□□□ -1.48
LINC00400-201ENST00000425609 SLC26A4O43511 780 aa5.8□□□□□ -1.48
LINC00400-201ENST00000425609 SLC43A1O75387 559 aa5.8□□□□□ -1.48
LINC00400-201ENST00000425609 ABHD16AO95870 558 aa5.8□□□□□ -1.48
LINC00400-201ENST00000425609 FGAP02671 866 aa5.8□□□□□ -1.48
LINC00400-201ENST00000425609 MTHFD1P11586 935 aaKnown RBP5.8□□□□□ -1.48
LINC00400-201ENST00000425609 TNFAIP2Q03169 654 aa5.8□□□□□ -1.48
LINC00400-201ENST00000425609 PTH1RQ03431 593 aa5.8□□□□□ -1.48
LINC00400-201ENST00000425609 RAPGEF1Q13905 1077 aa5.8□□□□□ -1.48
LINC00400-201ENST00000425609 ATP2B3Q16720 1220 aa5.8□□□□□ -1.48
LINC00400-201ENST00000425609 C3orf38Q5JPI3 329 aa5.8□□□□□ -1.48
LINC00400-201ENST00000425609 KBTBD2Q8IY47 623 aa5.8□□□□□ -1.48
LINC00400-201ENST00000425609 ANKRD42Q8N9B4 389 aa5.8□□□□□ -1.48
LINC00400-201ENST00000425609 ATXN2LQ8WWM7 1075 aaKnown RBP5.8□□□□□ -1.48
LINC00400-201ENST00000425609 TRIM43Q96BQ3 446 aaPredicted RBP5.8□□□□□ -1.48
LINC00400-201ENST00000425609 FAM84AQ96KN4 292 aa5.8□□□□□ -1.48
LINC00400-201ENST00000425609 MRI1Q9BV20 369 aa5.8□□□□□ -1.48
LINC00400-201ENST00000425609 RLIMQ9NVW2 624 aa5.8□□□□□ -1.48
LINC00400-201ENST00000425609 NCDNQ9UBB6 729 aa5.8□□□□□ -1.48
LINC00400-201ENST00000425609 LRCH1Q9Y2L9 728 aa5.8□□□□□ -1.48
LINC00400-201ENST00000425609 PCDHGB2Q9Y5G2 931 aa5.8□□□□□ -1.48
LINC00400-201ENST00000425609 SCRIBQ14160 1630 aa5.8□□□□□ -1.48
LINC00400-201ENST00000425609 PNPLA7Q6ZV29 1317 aa5.79□□□□□ -1.48
LINC00400-201ENST00000425609 CC2D2AQ9P2K1 1620 aa5.79□□□□□ -1.48
LINC00400-201ENST00000425609 A0A087WV62 115 aa5.79□□□□□ -1.48
LINC00400-201ENST00000425609 TCAF2A6NFQ2 919 aa5.79□□□□□ -1.48
LINC00400-201ENST00000425609 RFXAPO00287 272 aa5.79□□□□□ -1.48
LINC00400-201ENST00000425609 APOL1O14791 398 aa5.79□□□□□ -1.48
LINC00400-201ENST00000425609 PJA2O43164 708 aa5.79□□□□□ -1.48
LINC00400-201ENST00000425609 STC2O76061 302 aa5.79□□□□□ -1.48
LINC00400-201ENST00000425609 C1QTNF9P0C862 333 aa5.79□□□□□ -1.48
LINC00400-201ENST00000425609 ATP5JP18859 108 aa5.79□□□□□ -1.48
LINC00400-201ENST00000425609 AFF3P51826 1226 aaKnown RBP5.79□□□□□ -1.48
LINC00400-201ENST00000425609 NPEPPSP55786 919 aa5.79□□□□□ -1.48
LINC00400-201ENST00000425609 RPS16P62249 146 aaKnown RBP5.79□□□□□ -1.48
LINC00400-201ENST00000425609 CREMQ03060 361 aa5.79□□□□□ -1.48
LINC00400-201ENST00000425609 DUSP8Q13202 625 aa5.79□□□□□ -1.48
LINC00400-201ENST00000425609 RIN1Q13671 783 aa5.79□□□□□ -1.48
LINC00400-201ENST00000425609 TRIM14Q14142 442 aa5.79□□□□□ -1.48
LINC00400-201ENST00000425609 ZNF385BQ569K4 471 aa5.79□□□□□ -1.48
LINC00400-201ENST00000425609 KLHDC7AQ5VTJ3 777 aa5.79□□□□□ -1.48
LINC00400-201ENST00000425609 ZNF365Q70YC5 407 aa5.79□□□□□ -1.48
LINC00400-201ENST00000425609 MICU3Q86XE3 530 aa5.79□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms