RNA–Protein interactions for RNA: ENST00000411917.1

PTPA-208, Transcript of protein phosphatase 2 phosphatase activator, humanhuman

TSL 3

Gene PTPA, Length 738 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPA-208ENST00000411917 TET1Q8NFU7 2136 aa21.82■■□□□ 1.08
PTPA-208ENST00000411917 MICAL3Q7RTP6 2002 aa21.81■■□□□ 1.08
PTPA-208ENST00000411917 ANO9A1A5B4 782 aa21.81■■□□□ 1.08
PTPA-208ENST00000411917 VNN1O95497 513 aa21.81■■□□□ 1.08
PTPA-208ENST00000411917 AMHP03971 560 aa21.81■■□□□ 1.08
PTPA-208ENST00000411917 RPL9P32969 192 aaKnown RBP21.81■■□□□ 1.08
PTPA-208ENST00000411917 NCOA4Q13772 614 aa21.81■■□□□ 1.08
PTPA-208ENST00000411917 URGCPQ8TCY9 931 aa21.81■■□□□ 1.08
PTPA-208ENST00000411917 TAS1R2Q8TE23 839 aa21.81■■□□□ 1.08
PTPA-208ENST00000411917 TOP1MTQ969P6 601 aa21.81■■□□□ 1.08
PTPA-208ENST00000411917 GAD1Q99259 594 aa21.81■■□□□ 1.08
PTPA-208ENST00000411917 APOL6Q9BWW8 343 aa21.81■■□□□ 1.08
PTPA-208ENST00000411917 TTYH3Q9C0H2 523 aa21.81■■□□□ 1.08
PTPA-208ENST00000411917 DPP3Q9NY33 737 aa21.81■■□□□ 1.08
PTPA-208ENST00000411917 MYO6Q9UM54 1294 aa21.81■■□□□ 1.08
PTPA-208ENST00000411917 MEIS3P2A8K0S8 358 aa21.8■■□□□ 1.08
PTPA-208ENST00000411917 ASS1P00966 412 aaKnown RBP21.8■■□□□ 1.08
PTPA-208ENST00000411917 HLA-DRAP01903 254 aa21.8■■□□□ 1.08
PTPA-208ENST00000411917 PNPLA4P41247 253 aa21.8■■□□□ 1.08
PTPA-208ENST00000411917 RBP5P82980 135 aa21.8■■□□□ 1.08
PTPA-208ENST00000411917 TBX2Q13207 712 aaPredicted RBP21.8■■□□□ 1.08
PTPA-208ENST00000411917 ARID5BQ14865 1188 aa21.8■■□□□ 1.08
PTPA-208ENST00000411917 SGSM1Q2NKQ1 1148 aa21.8■■□□□ 1.08
PTPA-208ENST00000411917 NOMO2Q5JPE7 1267 aa21.8■■□□□ 1.08
PTPA-208ENST00000411917 CLLU1OSQ5K130 101 aa21.8■■□□□ 1.08
PTPA-208ENST00000411917 ENOSF1Q7L5Y1 443 aa21.8■■□□□ 1.08
PTPA-208ENST00000411917 FMNL3Q8IVF7 1028 aa21.8■■□□□ 1.08
PTPA-208ENST00000411917 HERVK_113Q902F9 699 aa21.8■■□□□ 1.08
PTPA-208ENST00000411917 LPPQ93052 612 aa21.8■■□□□ 1.08
PTPA-208ENST00000411917 DDX27Q96GQ7 796 aaKnown RBP21.8■■□□□ 1.08
PTPA-208ENST00000411917 IMPG2Q9BZV3 1241 aa21.8■■□□□ 1.08
PTPA-208ENST00000411917 INTS2Q9H0H0 1204 aaKnown RBP21.8■■□□□ 1.08
PTPA-208ENST00000411917 APEX2Q9UBZ4 518 aa21.8■■□□□ 1.08
PTPA-208ENST00000411917 SIX4Q9UIU6 781 aa21.8■■□□□ 1.08
PTPA-208ENST00000411917 LRFN2Q9ULH4 789 aa21.8■■□□□ 1.08
PTPA-208ENST00000411917 PDCD11Q14690 1871 aaKnown RBP21.79■■□□□ 1.08
PTPA-208ENST00000411917 PIRO00625 290 aa21.79■■□□□ 1.08
PTPA-208ENST00000411917 FGBP02675 491 aa21.79■■□□□ 1.08
PTPA-208ENST00000411917 WDR5P61964 334 aaKnown RBP21.79■■□□□ 1.08
PTPA-208ENST00000411917 GCNT1Q02742 428 aa21.79■■□□□ 1.08
PTPA-208ENST00000411917 DSC1Q08554 894 aa21.79■■□□□ 1.08
PTPA-208ENST00000411917 CCDC173Q0VFZ6 552 aa21.79■■□□□ 1.08
PTPA-208ENST00000411917 BIRC3Q13489 604 aa21.79■■□□□ 1.08
PTPA-208ENST00000411917 KLHDC7AQ5VTJ3 777 aa21.79■■□□□ 1.08
PTPA-208ENST00000411917 C16orf59Q7L2K0 433 aa21.79■■□□□ 1.08
PTPA-208ENST00000411917 CCDC150Q8NCX0 1101 aa21.79■■□□□ 1.08
PTPA-208ENST00000411917 PHOSPHO2Q8TCD6 241 aa21.79■■□□□ 1.08
PTPA-208ENST00000411917 ZFP42Q96MM3 310 aa21.79■■□□□ 1.08
PTPA-208ENST00000411917 PPP1R9BQ96SB3 815 aa21.79■■□□□ 1.08
PTPA-208ENST00000411917 XYLT2Q9H1B5 865 aa21.79■■□□□ 1.08
PTPA-208ENST00000411917 MTIF3Q9H2K0 278 aaKnown RBP21.79■■□□□ 1.08
PTPA-208ENST00000411917 SIX2Q9NPC8 291 aa21.79■■□□□ 1.08
PTPA-208ENST00000411917 KLK14Q9P0G3 267 aa21.79■■□□□ 1.08
PTPA-208ENST00000411917 CEP72Q9P209 647 aa21.79■■□□□ 1.08
PTPA-208ENST00000411917 GOLGA6L6A8MZA4 724 aa21.78■■□□□ 1.08
PTPA-208ENST00000411917 PHACTR2O75167 634 aa21.78■■□□□ 1.08
PTPA-208ENST00000411917 PIK3CAP42336 1068 aa21.78■■□□□ 1.08
PTPA-208ENST00000411917 TUSC3Q13454 348 aa21.78■■□□□ 1.08
PTPA-208ENST00000411917 TRPC3Q13507 836 aa21.78■■□□□ 1.08
PTPA-208ENST00000411917 WDR44Q5JSH3 913 aa21.78■■□□□ 1.08
PTPA-208ENST00000411917 TMEM240Q5SV17 173 aa21.78■■□□□ 1.08
PTPA-208ENST00000411917 LMBRD2Q68DH5 695 aaPredicted RBP21.78■■□□□ 1.08
PTPA-208ENST00000411917 NEK11Q8NG66 645 aa21.78■■□□□ 1.08
PTPA-208ENST00000411917 DPF3Q92784 378 aa21.78■■□□□ 1.08
PTPA-208ENST00000411917 ZNF560Q96MR9 790 aa21.78■■□□□ 1.08
PTPA-208ENST00000411917 CASD1Q96PB1 797 aa21.78■■□□□ 1.08
PTPA-208ENST00000411917 LBHD1Q9BQE6 289 aaPredicted RBP21.78■■□□□ 1.08
PTPA-208ENST00000411917 NAA15Q9BXJ9 866 aaKnown RBP21.78■■□□□ 1.08
PTPA-208ENST00000411917 NUCKS1Q9H1E3 243 aaKnown RBP21.78■■□□□ 1.08
PTPA-208ENST00000411917 GANQ9H2C0 597 aa21.78■■□□□ 1.08
PTPA-208ENST00000411917 RC3H2Q9HBD1 1191 aaKnown RBP21.78■■□□□ 1.08
PTPA-208ENST00000411917 COL4A6Q14031 1691 aa21.78■■□□□ 1.08
PTPA-208ENST00000411917 TMEM189-UBE2V1I3L0A0 370 aa21.77■■□□□ 1.08
PTPA-208ENST00000411917 DGKIO75912 1065 aa21.77■■□□□ 1.08
PTPA-208ENST00000411917 NOL4O94818 638 aa21.77■■□□□ 1.08
PTPA-208ENST00000411917 TPM1P09493 284 aa21.77■■□□□ 1.08
PTPA-208ENST00000411917 FAM163BP0C2L3 166 aa21.77■■□□□ 1.08
PTPA-208ENST00000411917 UCHL3P15374 230 aa21.77■■□□□ 1.08
PTPA-208ENST00000411917 TRIM21P19474 475 aaKnown RBP21.77■■□□□ 1.08
PTPA-208ENST00000411917 SLC9A1P19634 815 aa21.77■■□□□ 1.08
PTPA-208ENST00000411917 TBXAS1P24557 533 aaPredicted RBP21.77■■□□□ 1.08
PTPA-208ENST00000411917 SCNN1GP51170 649 aa21.77■■□□□ 1.08
PTPA-208ENST00000411917 RASIP1Q5U651 963 aa21.77■■□□□ 1.08
PTPA-208ENST00000411917 C9orf57Q5W0N0 161 aa21.77■■□□□ 1.08
PTPA-208ENST00000411917 ABI1Q8IZP0 508 aa21.77■■□□□ 1.08
PTPA-208ENST00000411917 SEMA4DQ92854 862 aa21.77■■□□□ 1.08
PTPA-208ENST00000411917 ZNF689Q96CS4 500 aaPredicted RBP21.77■■□□□ 1.08
PTPA-208ENST00000411917 NT5C1BQ96P26 610 aa21.77■■□□□ 1.08
PTPA-208ENST00000411917 CRACR2AQ9BSW2 395 aa21.77■■□□□ 1.08
PTPA-208ENST00000411917 MMRN2Q9H8L6 949 aa21.77■■□□□ 1.08
PTPA-208ENST00000411917 CAPN11Q9UMQ6 739 aa21.77■■□□□ 1.08
PTPA-208ENST00000411917 R3HCC1Q9Y3T6 440 aaKnown RBP21.77■■□□□ 1.08
PTPA-208ENST00000411917 CST3P01034 146 aaPredicted RBP21.76■■□□□ 1.07
PTPA-208ENST00000411917 ITGB3P05106 788 aa21.76■■□□□ 1.07
PTPA-208ENST00000411917 KCNJ6P48051 423 aa21.76■■□□□ 1.07
PTPA-208ENST00000411917 GSDMDP57764 484 aa21.76■■□□□ 1.07
PTPA-208ENST00000411917 MYO1EQ12965 1108 aa21.76■■□□□ 1.07
PTPA-208ENST00000411917 LIN28BQ6ZN17 250 aaKnown RBP eCLIP21.76■■□□□ 1.07
PTPA-208ENST00000411917 ZNF365Q70YC5 407 aa21.76■■□□□ 1.07
PTPA-208ENST00000411917 RNF169Q8NCN4 708 aa21.76■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 157.2 ms