RNA–Protein interactions for RNA: ENST00000408314.1

SNORD88A-201, Transcript of small nucleolar RNA, C/D box 88A, humanhuman

BASIC

Gene SNORD88A, Length 91 nt, Biotype snoRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD88A-201ENST00000408314 MTMR6Q9Y217 621 aa9.9□□□□□ -0.82
SNORD88A-201ENST00000408314 CLIC4Q9Y696 253 aa9.9□□□□□ -0.82
SNORD88A-201ENST00000408314 MTCL1Q9Y4B5 1905 aaKnown RBP9.9□□□□□ -0.83
SNORD88A-201ENST00000408314 PLXNA3P51805 1871 aa9.89□□□□□ -0.83
SNORD88A-201ENST00000408314 NPHP3-ACAD11A0A0J9YXS1 232 aa9.89□□□□□ -0.83
SNORD88A-201ENST00000408314 RFPL2O75678 378 aa9.89□□□□□ -0.83
SNORD88A-201ENST00000408314 CXCL8P10145 99 aa9.89□□□□□ -0.83
SNORD88A-201ENST00000408314 OR1D2P34982 312 aa9.89□□□□□ -0.83
SNORD88A-201ENST00000408314 STAT6P42226 847 aa9.89□□□□□ -0.83
SNORD88A-201ENST00000408314 NASPP49321 788 aaPredicted RBP9.89□□□□□ -0.83
SNORD88A-201ENST00000408314 GTF2BQ00403 316 aa9.89□□□□□ -0.83
SNORD88A-201ENST00000408314 CACNB1Q02641 598 aaPredicted RBP9.89□□□□□ -0.83
SNORD88A-201ENST00000408314 SLC39A14Q15043 492 aa9.89□□□□□ -0.83
SNORD88A-201ENST00000408314 TPGS2Q68CL5 300 aa9.89□□□□□ -0.83
SNORD88A-201ENST00000408314 BEST2Q8NFU1 509 aa9.89□□□□□ -0.83
SNORD88A-201ENST00000408314 ZNF707Q96C28 371 aaPredicted RBP9.89□□□□□ -0.83
SNORD88A-201ENST00000408314 KIF12Q96FN5 646 aa9.89□□□□□ -0.83
SNORD88A-201ENST00000408314 SUSD3Q96L08 255 aa9.89□□□□□ -0.83
SNORD88A-201ENST00000408314 CLSTN3Q9BQT9 956 aa9.89□□□□□ -0.83
SNORD88A-201ENST00000408314 CUEDC2Q9H467 287 aa9.89□□□□□ -0.83
SNORD88A-201ENST00000408314 GOLGA2P5Q9HBQ8 144 aa9.89□□□□□ -0.83
SNORD88A-201ENST00000408314 CACNG4Q9UBN1 327 aa9.89□□□□□ -0.83
SNORD88A-201ENST00000408314 CDH22Q9UJ99 828 aa9.89□□□□□ -0.83
SNORD88A-201ENST00000408314 DERAQ9Y315 318 aa9.89□□□□□ -0.83
SNORD88A-201ENST00000408314 CDY1Q9Y6F8 540 aa9.89□□□□□ -0.83
SNORD88A-201ENST00000408314 MUC6Q6W4X9 2439 aa9.89□□□□□ -0.83
SNORD88A-201ENST00000408314 A0A0B4J269 797 aa9.88□□□□□ -0.83
SNORD88A-201ENST00000408314 PRRG1O14668 218 aa9.88□□□□□ -0.83
SNORD88A-201ENST00000408314 PPP6R2O75170 966 aa9.88□□□□□ -0.83
SNORD88A-201ENST00000408314 YEATS4O95619 227 aa9.88□□□□□ -0.83
SNORD88A-201ENST00000408314 LRG1P02750 347 aa9.88□□□□□ -0.83
SNORD88A-201ENST00000408314 SPATA31D3P0C874 917 aa9.88□□□□□ -0.83
SNORD88A-201ENST00000408314 FSHRP23945 695 aa9.88□□□□□ -0.83
SNORD88A-201ENST00000408314 TKTP29401 623 aaKnown RBP9.88□□□□□ -0.83
SNORD88A-201ENST00000408314 LRPAP1P30533 357 aa9.88□□□□□ -0.83
SNORD88A-201ENST00000408314 PTPN5P54829 565 aa9.88□□□□□ -0.83
SNORD88A-201ENST00000408314 AMPD3Q01432 767 aa9.88□□□□□ -0.83
SNORD88A-201ENST00000408314 CEBPZQ03701 1054 aaKnown RBP9.88□□□□□ -0.83
SNORD88A-201ENST00000408314 GRIN1Q05586 938 aa9.88□□□□□ -0.83
SNORD88A-201ENST00000408314 SOX4Q06945 474 aaPredicted RBP9.88□□□□□ -0.83
SNORD88A-201ENST00000408314 SLC10A6Q3KNW5 377 aa9.88□□□□□ -0.83
SNORD88A-201ENST00000408314 VARS2Q5ST30 1063 aaKnown RBP9.88□□□□□ -0.83
SNORD88A-201ENST00000408314 AXDND1Q5T1B0 1012 aaPredicted RBP9.88□□□□□ -0.83
SNORD88A-201ENST00000408314 ATL3Q6DD88 541 aa9.88□□□□□ -0.83
SNORD88A-201ENST00000408314 SLC8B1Q6J4K2 584 aa9.88□□□□□ -0.83
SNORD88A-201ENST00000408314 KANK3Q6NY19 840 aa9.88□□□□□ -0.83
SNORD88A-201ENST00000408314 SPATA31D4Q6ZUB0 917 aa9.88□□□□□ -0.83
SNORD88A-201ENST00000408314 MTSS1LQ765P7 747 aa9.88□□□□□ -0.83
SNORD88A-201ENST00000408314 GET4Q7L5D6 327 aaPredicted RBP9.88□□□□□ -0.83
SNORD88A-201ENST00000408314 USP37Q86T82 979 aa9.88□□□□□ -0.83
SNORD88A-201ENST00000408314 NT5DC4Q86YG4 428 aa9.88□□□□□ -0.83
SNORD88A-201ENST00000408314 ELMOD1Q8N336 334 aa9.88□□□□□ -0.83
SNORD88A-201ENST00000408314 SLC7A14Q8TBB6 771 aa9.88□□□□□ -0.83
SNORD88A-201ENST00000408314 ASIC4Q96FT7 647 aa9.88□□□□□ -0.83
SNORD88A-201ENST00000408314 EPSTI1Q96J88 318 aa9.88□□□□□ -0.83
SNORD88A-201ENST00000408314 ZBTB45Q96K62 511 aaPredicted RBP9.88□□□□□ -0.83
SNORD88A-201ENST00000408314 ZMAT2Q96NC0 199 aaKnown RBP9.88□□□□□ -0.83
SNORD88A-201ENST00000408314 USP28Q96RU2 1077 aa9.88□□□□□ -0.83
SNORD88A-201ENST00000408314 PYM1Q9BRP8 204 aaKnown RBP9.88□□□□□ -0.83
SNORD88A-201ENST00000408314 ASB7Q9H672 318 aa9.88□□□□□ -0.83
SNORD88A-201ENST00000408314 MRPL44Q9H9J2 332 aaKnown RBP9.88□□□□□ -0.83
SNORD88A-201ENST00000408314 RAPGEFL1Q9UHV5 662 aa9.88□□□□□ -0.83
SNORD88A-201ENST00000408314 KCNH3Q9ULD8 1083 aa9.88□□□□□ -0.83
SNORD88A-201ENST00000408314 PCDHB8Q9UN66 801 aa9.88□□□□□ -0.83
SNORD88A-201ENST00000408314 DUSP12Q9UNI6 340 aa9.88□□□□□ -0.83
SNORD88A-201ENST00000408314 PCDHB13Q9Y5F0 798 aa9.88□□□□□ -0.83
SNORD88A-201ENST00000408314 C2orf16Q68DN1 1984 aa9.88□□□□□ -0.83
SNORD88A-201ENST00000408314 ZNF318Q5VUA4 2279 aa9.87□□□□□ -0.83
SNORD88A-201ENST00000408314 ZDBF2Q9HCK1 2354 aa9.87□□□□□ -0.83
SNORD88A-201ENST00000408314 TRIP11Q15643 1979 aa9.87□□□□□ -0.83
SNORD88A-201ENST00000408314 TTC26A0AVF1 554 aa9.87□□□□□ -0.83
SNORD88A-201ENST00000408314 KIAA0391O15091 583 aaKnown RBP9.87□□□□□ -0.83
SNORD88A-201ENST00000408314 SPTLC2O15270 562 aa9.87□□□□□ -0.83
SNORD88A-201ENST00000408314 LDHAP00338 332 aaKnown RBP9.87□□□□□ -0.83
SNORD88A-201ENST00000408314 ASGR2P07307 311 aa9.87□□□□□ -0.83
SNORD88A-201ENST00000408314 RFX1P22670 979 aa9.87□□□□□ -0.83
SNORD88A-201ENST00000408314 ROR1Q01973 937 aa9.87□□□□□ -0.83
SNORD88A-201ENST00000408314 YWHAHQ04917 246 aaPredicted RBP9.87□□□□□ -0.83
SNORD88A-201ENST00000408314 PLD1Q13393 1074 aa9.87□□□□□ -0.83
SNORD88A-201ENST00000408314 CTXN3Q4LDR2 81 aa9.87□□□□□ -0.83
SNORD88A-201ENST00000408314 ADALQ6DHV7 355 aa9.87□□□□□ -0.83
SNORD88A-201ENST00000408314 DSTYKQ6XUX3 929 aa9.87□□□□□ -0.83
SNORD88A-201ENST00000408314 DYMQ7RTS9 669 aa9.87□□□□□ -0.83
SNORD88A-201ENST00000408314 SFR1Q86XK3 245 aa9.87□□□□□ -0.83
SNORD88A-201ENST00000408314 CCDC65Q8IXS2 484 aa9.87□□□□□ -0.83
SNORD88A-201ENST00000408314 LEMD2Q8NC56 503 aa9.87□□□□□ -0.83
SNORD88A-201ENST00000408314 C3orf58Q8NDZ4 430 aa9.87□□□□□ -0.83
SNORD88A-201ENST00000408314 ZNF461Q8TAF7 563 aa9.87□□□□□ -0.83
SNORD88A-201ENST00000408314 KCNG4Q8TDN1 519 aa9.87□□□□□ -0.83
SNORD88A-201ENST00000408314 DDX12PQ92771 950 aa9.87□□□□□ -0.83
SNORD88A-201ENST00000408314 ACCSQ96QU6 501 aa9.87□□□□□ -0.83
SNORD88A-201ENST00000408314 CXCL16Q9H2A7 254 aa9.87□□□□□ -0.83
SNORD88A-201ENST00000408314 MAGEF1Q9HAY2 307 aa9.87□□□□□ -0.83
SNORD88A-201ENST00000408314 KCNK12Q9HB15 430 aa9.87□□□□□ -0.83
SNORD88A-201ENST00000408314 OLFML3Q9NRN5 406 aa9.87□□□□□ -0.83
SNORD88A-201ENST00000408314 FBXL21Q9UKT6 434 aa9.87□□□□□ -0.83
SNORD88A-201ENST00000408314 AGO2Q9UKV8 859 aaKnown RBP9.87□□□□□ -0.83
SNORD88A-201ENST00000408314 DSEQ9UL01 958 aa9.87□□□□□ -0.83
SNORD88A-201ENST00000408314 CDH7Q9ULB5 785 aa9.87□□□□□ -0.83
SNORD88A-201ENST00000408314 POLIQ9UNA4 740 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms