RNA–Protein interactions for RNA: ENST00000406949.5

PCNX4-204, Transcript of pecanex 4, humanhuman

TSL 2 BASIC

Gene PCNX4, Length 3,513 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX4-204ENST00000406949 CHST7Q9NS84 486 aa12.67□□□□□ -0.38
PCNX4-204ENST00000406949 GGT7Q9UJ14 662 aa12.67□□□□□ -0.38
PCNX4-204ENST00000406949 C10orf71Q711Q0 1435 aa12.67□□□□□ -0.38
PCNX4-204ENST00000406949 EXTL3O43909 919 aa12.67□□□□□ -0.38
PCNX4-204ENST00000406949 GBP1P32455 592 aa12.67□□□□□ -0.38
PCNX4-204ENST00000406949 LACTBP83111 547 aaPredicted RBP12.67□□□□□ -0.38
PCNX4-204ENST00000406949 NCOA4Q13772 614 aa12.67□□□□□ -0.38
PCNX4-204ENST00000406949 CLEC16AQ2KHT3 1053 aa12.67□□□□□ -0.38
PCNX4-204ENST00000406949 C1orf220Q5T0J3 134 aa12.67□□□□□ -0.38
PCNX4-204ENST00000406949 AGBL2Q5U5Z8 902 aa12.67□□□□□ -0.38
PCNX4-204ENST00000406949 CD302Q8IX05 232 aa12.67□□□□□ -0.38
PCNX4-204ENST00000406949 TRIM11Q96F44 468 aa12.67□□□□□ -0.38
PCNX4-204ENST00000406949 DDX23Q9BUQ8 820 aaKnown RBP12.67□□□□□ -0.38
PCNX4-204ENST00000406949 CNOT10Q9H9A5 744 aaKnown RBP12.67□□□□□ -0.38
PCNX4-204ENST00000406949 MRPL47Q9HD33 250 aaKnown RBP12.67□□□□□ -0.38
PCNX4-204ENST00000406949 HOXC10Q9NYD6 342 aa12.67□□□□□ -0.38
PCNX4-204ENST00000406949 NOCTQ9UK39 431 aaKnown RBP12.67□□□□□ -0.38
PCNX4-204ENST00000406949 CSADQ9Y600 493 aa12.67□□□□□ -0.38
PCNX4-204ENST00000406949 ADGRA3Q8IWK6 1321 aa12.67□□□□□ -0.38
PCNX4-204ENST00000406949 ECHS1P30084 290 aa12.67□□□□□ -0.38
PCNX4-204ENST00000406949 TMEM132BQ14DG7 1078 aa12.67□□□□□ -0.38
PCNX4-204ENST00000406949 PACS2Q86VP3 889 aa12.67□□□□□ -0.38
PCNX4-204ENST00000406949 HELQQ8TDG4 1101 aa12.67□□□□□ -0.38
PCNX4-204ENST00000406949 PRMT1Q99873 361 aaKnown RBP12.67□□□□□ -0.38
PCNX4-204ENST00000406949 HOMER3Q9NSC5 361 aa12.67□□□□□ -0.38
PCNX4-204ENST00000406949 NKIRAS1Q9NYS0 192 aa12.67□□□□□ -0.38
PCNX4-204ENST00000406949 WEE2P0C1S8 567 aa12.66□□□□□ -0.38
PCNX4-204ENST00000406949 PTPRAP18433 802 aa12.66□□□□□ -0.38
PCNX4-204ENST00000406949 BYSLQ13895 437 aaKnown RBP12.66□□□□□ -0.38
PCNX4-204ENST00000406949 PRUNE1Q86TP1 453 aa12.66□□□□□ -0.38
PCNX4-204ENST00000406949 ZBTB8OSQ8IWT0 167 aa12.66□□□□□ -0.38
PCNX4-204ENST00000406949 CCDC13Q8IYE1 715 aa12.66□□□□□ -0.38
PCNX4-204ENST00000406949 RNF149Q8NC42 400 aa12.66□□□□□ -0.38
PCNX4-204ENST00000406949 TMC2Q8TDI7 906 aa12.66□□□□□ -0.38
PCNX4-204ENST00000406949 THOC1Q96FV9 657 aaKnown RBP12.66□□□□□ -0.38
PCNX4-204ENST00000406949 PWWP2AQ96N64 755 aa12.66□□□□□ -0.38
PCNX4-204ENST00000406949 KIAA1586Q9HCI6 787 aa12.66□□□□□ -0.38
PCNX4-204ENST00000406949 GOLGA8MH3BSY2 632 aa12.66□□□□□ -0.38
PCNX4-204ENST00000406949 GGPS1O95749 300 aa12.66□□□□□ -0.38
PCNX4-204ENST00000406949 SUPT20HL2P0C7V6 817 aa12.66□□□□□ -0.38
PCNX4-204ENST00000406949 KRT10P13645 584 aa12.66□□□□□ -0.38
PCNX4-204ENST00000406949 KRT15P19012 456 aa12.66□□□□□ -0.38
PCNX4-204ENST00000406949 STX2P32856 288 aa12.66□□□□□ -0.38
PCNX4-204ENST00000406949 GPC3P51654 580 aa12.66□□□□□ -0.38
PCNX4-204ENST00000406949 ITGA8P53708 1063 aa12.66□□□□□ -0.38
PCNX4-204ENST00000406949 TMED2Q15363 201 aa12.66□□□□□ -0.38
PCNX4-204ENST00000406949 SUPT20HL1Q3ZLR7 823 aa12.66□□□□□ -0.38
PCNX4-204ENST00000406949 FAM133BQ5BKY9 247 aaKnown RBP12.66□□□□□ -0.38
PCNX4-204ENST00000406949 ZBTB41Q5SVQ8 909 aa12.66□□□□□ -0.38
PCNX4-204ENST00000406949 SLFN12LQ6IEE8 588 aa12.66□□□□□ -0.38
PCNX4-204ENST00000406949 ENOSF1Q7L5Y1 443 aa12.66□□□□□ -0.38
PCNX4-204ENST00000406949 SPATS2Q86XZ4 545 aaKnown RBP12.66□□□□□ -0.38
PCNX4-204ENST00000406949 RHPN2Q8IUC4 686 aa12.66□□□□□ -0.38
PCNX4-204ENST00000406949 SRRM1Q8IYB3 904 aaKnown RBP12.66□□□□□ -0.38
PCNX4-204ENST00000406949 MCOLN2Q8IZK6 566 aa12.66□□□□□ -0.38
PCNX4-204ENST00000406949 CCDC197Q8NCU1 140 aa12.66□□□□□ -0.38
PCNX4-204ENST00000406949 MORC4Q8TE76 937 aa12.66□□□□□ -0.38
PCNX4-204ENST00000406949 ARHGEF2Q92974 986 aaKnown RBP12.66□□□□□ -0.38
PCNX4-204ENST00000406949 ZWILCHQ9H900 591 aa12.66□□□□□ -0.38
PCNX4-204ENST00000406949 ARFGEF1Q9Y6D6 1849 aa12.66□□□□□ -0.38
PCNX4-204ENST00000406949 ANKRD31Q8N7Z5 1873 aa12.66□□□□□ -0.38
PCNX4-204ENST00000406949 SGK1O00141 431 aa12.66□□□□□ -0.38
PCNX4-204ENST00000406949 OATP04181 439 aa12.66□□□□□ -0.38
PCNX4-204ENST00000406949 FDX1P10109 184 aa12.66□□□□□ -0.38
PCNX4-204ENST00000406949 STAT5BP51692 787 aa12.66□□□□□ -0.38
PCNX4-204ENST00000406949 SNRPFP62306 86 aaKnown RBP12.66□□□□□ -0.38
PCNX4-204ENST00000406949 DLK2Q6UY11 383 aa12.66□□□□□ -0.38
PCNX4-204ENST00000406949 PNMA8AQ86V59 439 aaPredicted RBP12.66□□□□□ -0.38
PCNX4-204ENST00000406949 TRIM50Q86XT4 487 aa12.66□□□□□ -0.38
PCNX4-204ENST00000406949 CHMP6Q96FZ7 201 aa12.66□□□□□ -0.38
PCNX4-204ENST00000406949 XPO6Q96QU8 1125 aaKnown RBP12.66□□□□□ -0.38
PCNX4-204ENST00000406949 PCDHA3Q9Y5H8 950 aa12.66□□□□□ -0.38
PCNX4-204ENST00000406949 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.66□□□□□ -0.38
PCNX4-204ENST00000406949 LYPLA2O95372 231 aa12.65□□□□□ -0.38
PCNX4-204ENST00000406949 ORC1Q13415 861 aa12.65□□□□□ -0.38
PCNX4-204ENST00000406949 CUL2Q13617 745 aa12.65□□□□□ -0.38
PCNX4-204ENST00000406949 FAM160B1Q5W0V3 765 aa12.65□□□□□ -0.38
PCNX4-204ENST00000406949 B3GNT9Q6UX72 402 aa12.65□□□□□ -0.38
PCNX4-204ENST00000406949 RHOT1Q8IXI2 618 aa12.65□□□□□ -0.38
PCNX4-204ENST00000406949 C12orf56Q8IXR9 622 aa12.65□□□□□ -0.38
PCNX4-204ENST00000406949 ASAP3Q8TDY4 903 aa12.65□□□□□ -0.38
PCNX4-204ENST00000406949 HVCN1Q96D96 273 aa12.65□□□□□ -0.38
PCNX4-204ENST00000406949 SNF8Q96H20 258 aa12.65□□□□□ -0.38
PCNX4-204ENST00000406949 SEC16BQ96JE7 1060 aa12.65□□□□□ -0.38
PCNX4-204ENST00000406949 CYP39A1Q9NYL5 469 aa12.65□□□□□ -0.38
PCNX4-204ENST00000406949 RPTORQ8N122 1335 aa12.65□□□□□ -0.38
PCNX4-204ENST00000406949 MAFGO15525 162 aa12.65□□□□□ -0.38
PCNX4-204ENST00000406949 GARTP22102 1010 aa12.65□□□□□ -0.38
PCNX4-204ENST00000406949 DSG3P32926 999 aa12.65□□□□□ -0.38
PCNX4-204ENST00000406949 SPIRE2Q8WWL2 714 aa12.65□□□□□ -0.38
PCNX4-204ENST00000406949 OTUD5Q96G74 571 aa12.65□□□□□ -0.38
PCNX4-204ENST00000406949 MCEEQ96PE7 176 aa12.65□□□□□ -0.38
PCNX4-204ENST00000406949 OSBPL8Q9BZF1 889 aa12.65□□□□□ -0.38
PCNX4-204ENST00000406949 MTMR12Q9C0I1 747 aa12.65□□□□□ -0.38
PCNX4-204ENST00000406949 CDC42EP4Q9H3Q1 356 aaKnown RBP12.65□□□□□ -0.38
PCNX4-204ENST00000406949 C17orf75Q9HAS0 396 aa12.65□□□□□ -0.38
PCNX4-204ENST00000406949 XPNPEP1Q9NQW7 623 aa12.65□□□□□ -0.38
PCNX4-204ENST00000406949 PPFIA2O75334 1257 aa12.65□□□□□ -0.39
PCNX4-204ENST00000406949 GBP2P32456 591 aaPredicted RBP12.65□□□□□ -0.39
PCNX4-204ENST00000406949 GTF2H1P32780 548 aa12.65□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms