RNA–Protein interactions for RNA: ENST00000406438.4

SMCR8-201, Transcript of Smith-Magenis syndrome chromosome region, candidate 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCR8, Length 8,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCR8-201ENST00000406438 LTKP29376 864 aa12.66□□□□□ -0.38
SMCR8-201ENST00000406438 HORMAD1Q86X24 394 aa12.66□□□□□ -0.38
SMCR8-201ENST00000406438 CYGBQ8WWM9 190 aa12.66□□□□□ -0.38
SMCR8-201ENST00000406438 RFFLQ8WZ73 363 aa12.66□□□□□ -0.38
SMCR8-201ENST00000406438 HES6Q96HZ4 224 aa12.66□□□□□ -0.38
SMCR8-201ENST00000406438 XPO7Q9UIA9 1087 aaKnown RBP12.66□□□□□ -0.38
SMCR8-201ENST00000406438 PVALEFA0A1B0GWK0 134 aa12.65□□□□□ -0.38
SMCR8-201ENST00000406438 RGS4P49798 205 aa12.65□□□□□ -0.38
SMCR8-201ENST00000406438 C16orf89Q6UX73 402 aa12.65□□□□□ -0.38
SMCR8-201ENST00000406438 LATS2Q9NRM7 1088 aa12.65□□□□□ -0.38
SMCR8-201ENST00000406438 CCDC15Q0P6D6 951 aa12.65□□□□□ -0.38
SMCR8-201ENST00000406438 NECTIN1Q15223 517 aa12.65□□□□□ -0.38
SMCR8-201ENST00000406438 RFX8Q6ZV50 586 aa12.65□□□□□ -0.38
SMCR8-201ENST00000406438 DIS3LQ8TF46 1054 aaKnown RBP12.65□□□□□ -0.38
SMCR8-201ENST00000406438 TMA16Q96EY4 203 aaKnown RBP12.65□□□□□ -0.38
SMCR8-201ENST00000406438 PCDHA10Q9Y5I2 948 aa12.65□□□□□ -0.38
SMCR8-201ENST00000406438 ADGRL3Q9HAR2 1447 aa12.65□□□□□ -0.38
SMCR8-201ENST00000406438 CDC27P30260 824 aa12.65□□□□□ -0.38
SMCR8-201ENST00000406438 STAT4Q14765 748 aa12.65□□□□□ -0.38
SMCR8-201ENST00000406438 CLMNQ96JQ2 1002 aa12.65□□□□□ -0.38
SMCR8-201ENST00000406438 IQGAP3Q86VI3 1631 aa12.65□□□□□ -0.38
SMCR8-201ENST00000406438 GRM4Q14833 912 aa12.65□□□□□ -0.38
SMCR8-201ENST00000406438 SYNE4Q8N205 404 aa12.65□□□□□ -0.38
SMCR8-201ENST00000406438 SNX31Q8N9S9 440 aa12.65□□□□□ -0.38
SMCR8-201ENST00000406438 SENP7Q9BQF6 1050 aa12.65□□□□□ -0.38
SMCR8-201ENST00000406438 INTS2Q9H0H0 1204 aaKnown RBP12.65□□□□□ -0.38
SMCR8-201ENST00000406438 ARHGEF38Q9NXL2 777 aa12.65□□□□□ -0.38
SMCR8-201ENST00000406438 COL15A1P39059 1388 aa12.65□□□□□ -0.38
SMCR8-201ENST00000406438 DAB1O75553 588 aa12.65□□□□□ -0.38
SMCR8-201ENST00000406438 SEC24DO94855 1032 aaPredicted RBP12.65□□□□□ -0.38
SMCR8-201ENST00000406438 PGM1P36871 562 aa12.65□□□□□ -0.38
SMCR8-201ENST00000406438 SMAD1Q15797 465 aaKnown RBP12.65□□□□□ -0.38
SMCR8-201ENST00000406438 IER5Q5VY09 327 aa12.65□□□□□ -0.38
SMCR8-201ENST00000406438 DHX40Q8IX18 779 aaKnown RBP12.65□□□□□ -0.38
SMCR8-201ENST00000406438 HS6ST3Q8IZP7 471 aa12.65□□□□□ -0.38
SMCR8-201ENST00000406438 TMEM106CQ9BVX2 250 aa12.65□□□□□ -0.38
SMCR8-201ENST00000406438 USE1Q9NZ43 259 aa12.65□□□□□ -0.38
SMCR8-201ENST00000406438 C16orf96A6NNT2 1141 aa12.65□□□□□ -0.38
SMCR8-201ENST00000406438 MYL2P10916 166 aa12.65□□□□□ -0.38
SMCR8-201ENST00000406438 SPP2Q13103 211 aa12.65□□□□□ -0.38
SMCR8-201ENST00000406438 CEP55Q53EZ4 464 aa12.65□□□□□ -0.38
SMCR8-201ENST00000406438 IL31Q6EBC2 164 aa12.65□□□□□ -0.38
SMCR8-201ENST00000406438 AGAP3Q96P47 875 aa12.65□□□□□ -0.38
SMCR8-201ENST00000406438 ADAM21Q9UKJ8 722 aa12.65□□□□□ -0.38
SMCR8-201ENST00000406438 SH3BP1Q9Y3L3 701 aa12.65□□□□□ -0.38
SMCR8-201ENST00000406438 DTNAQ9Y4J8 743 aa12.65□□□□□ -0.38
SMCR8-201ENST00000406438 PRDM15P57071 1507 aaPredicted RBP12.65□□□□□ -0.38
SMCR8-201ENST00000406438 ADGRA2Q96PE1 1338 aa12.65□□□□□ -0.39
SMCR8-201ENST00000406438 CENPAP49450 140 aa12.65□□□□□ -0.39
SMCR8-201ENST00000406438 RAD23BP54727 409 aa12.65□□□□□ -0.39
SMCR8-201ENST00000406438 CCDC142Q17RM4 750 aa12.65□□□□□ -0.39
SMCR8-201ENST00000406438 C6orf10Q5SRN2 563 aa12.65□□□□□ -0.39
SMCR8-201ENST00000406438 NSMCE4AQ9NXX6 385 aa12.65□□□□□ -0.39
SMCR8-201ENST00000406438 CDYLQ9Y232 598 aa12.65□□□□□ -0.39
SMCR8-201ENST00000406438 LZTS3O60299 673 aaPredicted RBP12.64□□□□□ -0.39
SMCR8-201ENST00000406438 ENO1P06733 434 aaKnown RBP12.64□□□□□ -0.39
SMCR8-201ENST00000406438 SHCBP1Q8NEM2 672 aa12.64□□□□□ -0.39
SMCR8-201ENST00000406438 ATL2Q8NHH9 583 aa12.64□□□□□ -0.39
SMCR8-201ENST00000406438 RFWD2Q8NHY2 731 aa12.64□□□□□ -0.39
SMCR8-201ENST00000406438 KCNV2Q8TDN2 545 aa12.64□□□□□ -0.39
SMCR8-201ENST00000406438 C1orf54Q8WWF1 131 aa12.64□□□□□ -0.39
SMCR8-201ENST00000406438 ARHGEF26Q96DR7 871 aa12.64□□□□□ -0.39
SMCR8-201ENST00000406438 C17orf80Q9BSJ5 609 aa12.64□□□□□ -0.39
SMCR8-201ENST00000406438 CATSPERBQ9H7T0 1116 aa12.64□□□□□ -0.39
SMCR8-201ENST00000406438 SLC38A7Q9NVC3 462 aa12.64□□□□□ -0.39
SMCR8-201ENST00000406438 DEAF1O75398 565 aaPredicted RBP12.64□□□□□ -0.39
SMCR8-201ENST00000406438 SCP2P22307 547 aa12.64□□□□□ -0.39
SMCR8-201ENST00000406438 FAM182BQ5T319 152 aa12.64□□□□□ -0.39
SMCR8-201ENST00000406438 RNF149Q8NC42 400 aa12.64□□□□□ -0.39
SMCR8-201ENST00000406438 ELMO2Q96JJ3 720 aa12.64□□□□□ -0.39
SMCR8-201ENST00000406438 GOLGA8RI6L899 631 aa12.64□□□□□ -0.39
SMCR8-201ENST00000406438 ALDH1A2O94788 518 aa12.64□□□□□ -0.39
SMCR8-201ENST00000406438 CD4P01730 458 aa12.64□□□□□ -0.39
SMCR8-201ENST00000406438 C16orf72Q14CZ0 275 aa12.64□□□□□ -0.39
SMCR8-201ENST00000406438 ARMC6Q6NXE6 501 aa12.64□□□□□ -0.39
SMCR8-201ENST00000406438 ATP6V1G3Q96LB4 118 aa12.64□□□□□ -0.39
SMCR8-201ENST00000406438 SMARCAD1Q9H4L7 1026 aa12.64□□□□□ -0.39
SMCR8-201ENST00000406438 KRCC1Q9NPI7 259 aaPredicted RBP12.64□□□□□ -0.39
SMCR8-201ENST00000406438 PCDHB7Q9Y5E2 793 aa12.64□□□□□ -0.39
SMCR8-201ENST00000406438 CHD4Q14839 1912 aa12.64□□□□□ -0.39
SMCR8-201ENST00000406438 MYO1GB0I1T2 1018 aa12.64□□□□□ -0.39
SMCR8-201ENST00000406438 NLRP11P59045 1033 aaKnown RBP12.64□□□□□ -0.39
SMCR8-201ENST00000406438 DDX42Q86XP3 938 aaKnown RBP eCLIP12.64□□□□□ -0.39
SMCR8-201ENST00000406438 PARP9Q8IXQ6 854 aa12.64□□□□□ -0.39
SMCR8-201ENST00000406438 SEPT12Q8IYM1 358 aa12.64□□□□□ -0.39
SMCR8-201ENST00000406438 FAM162AQ96A26 154 aa12.64□□□□□ -0.39
SMCR8-201ENST00000406438 CD274Q9NZQ7 290 aa12.64□□□□□ -0.39
SMCR8-201ENST00000406438 KIAA0391O15091 583 aaKnown RBP12.64□□□□□ -0.39
SMCR8-201ENST00000406438 ALDH1A3P47895 512 aa12.64□□□□□ -0.39
SMCR8-201ENST00000406438 E4F1Q66K89 784 aaPredicted RBP12.64□□□□□ -0.39
SMCR8-201ENST00000406438 CDR2LQ86X02 465 aaPredicted RBP12.64□□□□□ -0.39
SMCR8-201ENST00000406438 IQCA1LA6NCM1 817 aa12.64□□□□□ -0.39
SMCR8-201ENST00000406438 SUPT3HB4E1H0 165 aa12.64□□□□□ -0.39
SMCR8-201ENST00000406438 FGFR4P22455 802 aa12.64□□□□□ -0.39
SMCR8-201ENST00000406438 KIZQ2M2Z5 673 aa12.64□□□□□ -0.39
SMCR8-201ENST00000406438 POTEAQ6S8J7 498 aa12.64□□□□□ -0.39
SMCR8-201ENST00000406438 CMTM5Q96DZ9 223 aa12.64□□□□□ -0.39
SMCR8-201ENST00000406438 NPHS2Q9NP85 383 aa12.64□□□□□ -0.39
SMCR8-201ENST00000406438 SMG5Q9UPR3 1016 aaKnown RBP12.64□□□□□ -0.39
SMCR8-201ENST00000406438 F5H6K3 240 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms