RNA–Protein interactions for RNA: ENST00000399120.5

HLCS-202, Transcript of holocarboxylase synthetase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HLCS, Length 6,466 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLCS-202ENST00000399120 PITPNM2Q9BZ72 1349 aa12.2□□□□□ -0.46
HLCS-202ENST00000399120 SERPINB3P29508 390 aa12.2□□□□□ -0.46
HLCS-202ENST00000399120 IL6STP40189 918 aaPredicted RBP12.2□□□□□ -0.46
HLCS-202ENST00000399120 MLH1P40692 756 aa12.2□□□□□ -0.46
HLCS-202ENST00000399120 MAN1C1Q9NR34 630 aa12.2□□□□□ -0.46
HLCS-202ENST00000399120 F8W810 466 aa12.2□□□□□ -0.46
HLCS-202ENST00000399120 PRCPP42785 496 aa12.2□□□□□ -0.46
HLCS-202ENST00000399120 SLC1A1P43005 524 aa12.2□□□□□ -0.46
HLCS-202ENST00000399120 DALRD3Q5D0E6 543 aaKnown RBP12.2□□□□□ -0.46
HLCS-202ENST00000399120 SNRNP48Q6IEG0 339 aaKnown RBP12.2□□□□□ -0.46
HLCS-202ENST00000399120 ATL2Q8NHH9 583 aa12.2□□□□□ -0.46
HLCS-202ENST00000399120 FAM20AQ96MK3 541 aa12.2□□□□□ -0.46
HLCS-202ENST00000399120 RIC8BQ9NVN3 520 aa12.2□□□□□ -0.46
HLCS-202ENST00000399120 GABBR1Q9UBS5 961 aa12.2□□□□□ -0.46
HLCS-202ENST00000399120 APPL1Q9UKG1 709 aa12.2□□□□□ -0.46
HLCS-202ENST00000399120 ITSN2Q9NZM3 1697 aa12.2□□□□□ -0.46
HLCS-202ENST00000399120 GRIN2AQ12879 1464 aa12.2□□□□□ -0.46
HLCS-202ENST00000399120 PVALEFA0A1B0GWK0 134 aa12.2□□□□□ -0.46
HLCS-202ENST00000399120 NBPF26B4DH59 902 aa12.2□□□□□ -0.46
HLCS-202ENST00000399120 ALBP02768 609 aa12.2□□□□□ -0.46
HLCS-202ENST00000399120 BFSP2Q13515 415 aa12.2□□□□□ -0.46
HLCS-202ENST00000399120 DUOXA2Q1HG44 320 aa12.2□□□□□ -0.46
HLCS-202ENST00000399120 NBPF15Q8N660 670 aa12.2□□□□□ -0.46
HLCS-202ENST00000399120 KRT84Q9NSB2 600 aa12.2□□□□□ -0.46
HLCS-202ENST00000399120 GGT7Q9UJ14 662 aa12.2□□□□□ -0.46
HLCS-202ENST00000399120 RGS5O15539 181 aa12.19□□□□□ -0.46
HLCS-202ENST00000399120 P4HBP07237 508 aaKnown RBP12.19□□□□□ -0.46
HLCS-202ENST00000399120 TCN1P20061 433 aaPredicted RBP12.19□□□□□ -0.46
HLCS-202ENST00000399120 SOX6P35712 828 aa12.19□□□□□ -0.46
HLCS-202ENST00000399120 NT5C2P49902 561 aa12.19□□□□□ -0.46
HLCS-202ENST00000399120 SHROOM1Q2M3G4 852 aaPredicted RBP12.19□□□□□ -0.46
HLCS-202ENST00000399120 ALFQ53S48 1182 aa12.19□□□□□ -0.46
HLCS-202ENST00000399120 MFSD14CQ5VZR4 134 aa12.19□□□□□ -0.46
HLCS-202ENST00000399120 SLC30A9Q6PML9 568 aa12.19□□□□□ -0.46
HLCS-202ENST00000399120 RCOR2Q8IZ40 523 aa12.19□□□□□ -0.46
HLCS-202ENST00000399120 RFFLQ8WZ73 363 aa12.19□□□□□ -0.46
HLCS-202ENST00000399120 THTPAQ9BU02 230 aa12.19□□□□□ -0.46
HLCS-202ENST00000399120 DCDC2Q9UHG0 476 aa12.19□□□□□ -0.46
HLCS-202ENST00000399120 GTF2A1LQ9UNN4 478 aa12.19□□□□□ -0.46
HLCS-202ENST00000399120 QARSP47897 775 aaKnown RBP12.19□□□□□ -0.46
HLCS-202ENST00000399120 PHKG1Q16816 387 aa12.19□□□□□ -0.46
HLCS-202ENST00000399120 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.19□□□□□ -0.46
HLCS-202ENST00000399120 OOSP2Q86WS3 158 aa12.19□□□□□ -0.46
HLCS-202ENST00000399120 AIFM3Q96NN9 605 aa12.19□□□□□ -0.46
HLCS-202ENST00000399120 MMP19Q99542 508 aa12.19□□□□□ -0.46
HLCS-202ENST00000399120 MUC3BQ9H195 1237 aa12.19□□□□□ -0.46
HLCS-202ENST00000399120 SPASTQ9UBP0 616 aa12.19□□□□□ -0.46
HLCS-202ENST00000399120 MKL2Q9ULH7 1088 aa12.19□□□□□ -0.46
HLCS-202ENST00000399120 AGTP01019 485 aa12.19□□□□□ -0.46
HLCS-202ENST00000399120 DARSP14868 501 aaKnown RBP12.19□□□□□ -0.46
HLCS-202ENST00000399120 TRIP10Q15642 601 aa12.19□□□□□ -0.46
HLCS-202ENST00000399120 IL31Q6EBC2 164 aa12.19□□□□□ -0.46
HLCS-202ENST00000399120 CCDC149Q6ZUS6 474 aa12.19□□□□□ -0.46
HLCS-202ENST00000399120 DGKHQ86XP1 1220 aa12.19□□□□□ -0.46
HLCS-202ENST00000399120 PPP2R3CQ969Q6 453 aa12.19□□□□□ -0.46
HLCS-202ENST00000399120 STRNO43815 780 aa12.19□□□□□ -0.46
HLCS-202ENST00000399120 USP1O94782 785 aa12.19□□□□□ -0.46
HLCS-202ENST00000399120 SGO1Q5FBB7 561 aa12.19□□□□□ -0.46
HLCS-202ENST00000399120 GLYCTKQ8IVS8 523 aa12.19□□□□□ -0.46
HLCS-202ENST00000399120 RTKN2Q8IZC4 609 aa12.19□□□□□ -0.46
HLCS-202ENST00000399120 USP33Q8TEY7 942 aa12.19□□□□□ -0.46
HLCS-202ENST00000399120 IL17RAQ96F46 866 aa12.19□□□□□ -0.46
HLCS-202ENST00000399120 ZNF668Q96K58 619 aaPredicted RBP12.19□□□□□ -0.46
HLCS-202ENST00000399120 UGGT2Q9NYU1 1516 aa12.19□□□□□ -0.46
HLCS-202ENST00000399120 APRTP07741 180 aa12.19□□□□□ -0.46
HLCS-202ENST00000399120 IRX1P78414 480 aaPredicted RBP12.19□□□□□ -0.46
HLCS-202ENST00000399120 HIST2H2ACQ16777 129 aaPredicted RBP12.19□□□□□ -0.46
HLCS-202ENST00000399120 P3H1Q32P28 736 aa12.19□□□□□ -0.46
HLCS-202ENST00000399120 HIST2H2AA3Q6FI13 130 aa12.19□□□□□ -0.46
HLCS-202ENST00000399120 ERAP2Q6P179 960 aa12.19□□□□□ -0.46
HLCS-202ENST00000399120 IL17REQ8NFR9 667 aa12.19□□□□□ -0.46
HLCS-202ENST00000399120 SPATA33Q96N06 139 aa12.19□□□□□ -0.46
HLCS-202ENST00000399120 PPP1R2P1Q96PQ5 205 aa12.19□□□□□ -0.46
HLCS-202ENST00000399120 TRAPPC3O43617 180 aa12.18□□□□□ -0.46
HLCS-202ENST00000399120 ALDH1A2O94788 518 aa12.18□□□□□ -0.46
HLCS-202ENST00000399120 PGK2P07205 417 aa12.18□□□□□ -0.46
HLCS-202ENST00000399120 MZF1P28698 734 aaPredicted RBP12.18□□□□□ -0.46
HLCS-202ENST00000399120 RGS2P41220 211 aa12.18□□□□□ -0.46
HLCS-202ENST00000399120 KRR1Q13601 381 aaKnown RBP12.18□□□□□ -0.46
HLCS-202ENST00000399120 TRIM16LQ309B1 348 aa12.18□□□□□ -0.46
HLCS-202ENST00000399120 EFL1Q7Z2Z2 1120 aaKnown RBP12.18□□□□□ -0.46
HLCS-202ENST00000399120 CNDP1Q96KN2 507 aa12.18□□□□□ -0.46
HLCS-202ENST00000399120 BATF3Q9NR55 127 aa12.18□□□□□ -0.46
HLCS-202ENST00000399120 AGO2Q9UKV8 859 aaKnown RBP12.18□□□□□ -0.46
HLCS-202ENST00000399120 SNTNA6NMZ2 147 aa12.18□□□□□ -0.46
HLCS-202ENST00000399120 CSE1LP55060 971 aaKnown RBP12.18□□□□□ -0.46
HLCS-202ENST00000399120 SYCP2LQ5T4T6 812 aa12.18□□□□□ -0.46
HLCS-202ENST00000399120 RIN3Q8TB24 985 aa12.18□□□□□ -0.46
HLCS-202ENST00000399120 RSPH1Q8WYR4 309 aa12.18□□□□□ -0.46
HLCS-202ENST00000399120 KRT35Q92764 455 aa12.18□□□□□ -0.46
HLCS-202ENST00000399120 COA1Q9GZY4 146 aa12.18□□□□□ -0.46
HLCS-202ENST00000399120 IL1RL2Q9HB29 575 aa12.18□□□□□ -0.46
HLCS-202ENST00000399120 PARVBQ9HBI1 364 aa12.18□□□□□ -0.46
HLCS-202ENST00000399120 PCMTD2Q9NV79 361 aa12.18□□□□□ -0.46
HLCS-202ENST00000399120 MARCOQ9UEW3 520 aaPredicted RBP12.18□□□□□ -0.46
HLCS-202ENST00000399120 ZC3H7BQ9UGR2 993 aaKnown RBP12.18□□□□□ -0.46
HLCS-202ENST00000399120 CFAP99D6REC4 459 aa12.18□□□□□ -0.46
HLCS-202ENST00000399120 FAM196AQ6ZSG2 479 aa12.18□□□□□ -0.46
HLCS-202ENST00000399120 HS6ST3Q8IZP7 471 aa12.18□□□□□ -0.46
HLCS-202ENST00000399120 OSBP2Q969R2 916 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms