RNA–Protein interactions for RNA: ENST00000397041.7

ATP2A3-205, Transcript of ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene ATP2A3, Length 4,675 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A3-205ENST00000397041 TMEM143Q96AN5 459 aa16.69■□□□□ 0.26
ATP2A3-205ENST00000397041 SH3GL3Q99963 347 aa16.69■□□□□ 0.26
ATP2A3-205ENST00000397041 SENP7Q9BQF6 1050 aa16.69■□□□□ 0.26
ATP2A3-205ENST00000397041 YY1AP1Q9H869 796 aa16.69■□□□□ 0.26
ATP2A3-205ENST00000397041 ASNSD1Q9NWL6 643 aa16.69■□□□□ 0.26
ATP2A3-205ENST00000397041 NYAP2Q9P242 653 aa16.69■□□□□ 0.26
ATP2A3-205ENST00000397041 FEM1BQ9UK73 627 aa16.69■□□□□ 0.26
ATP2A3-205ENST00000397041 STRIP2Q9ULQ0 834 aa16.69■□□□□ 0.26
ATP2A3-205ENST00000397041 PCDHA10Q9Y5I2 948 aa16.69■□□□□ 0.26
ATP2A3-205ENST00000397041 SEC23IPQ9Y6Y8 1000 aaKnown RBP16.69■□□□□ 0.26
ATP2A3-205ENST00000397041 ANKRD20A4Q4UJ75 823 aa16.69■□□□□ 0.26
ATP2A3-205ENST00000397041 ANKRD20A2Q5SQ80 823 aa16.69■□□□□ 0.26
ATP2A3-205ENST00000397041 ANKRD20A1Q5TYW2 823 aa16.69■□□□□ 0.26
ATP2A3-205ENST00000397041 PRPF38AQ8NAV1 312 aaKnown RBP16.69■□□□□ 0.26
ATP2A3-205ENST00000397041 RBBP8NLQ8NC74 664 aaPredicted RBP16.69■□□□□ 0.26
ATP2A3-205ENST00000397041 MED15Q96RN5 788 aa16.69■□□□□ 0.26
ATP2A3-205ENST00000397041 RANBP17Q9H2T7 1088 aaKnown RBP16.69■□□□□ 0.26
ATP2A3-205ENST00000397041 RAB6BQ9NRW1 208 aa16.69■□□□□ 0.26
ATP2A3-205ENST00000397041 PCDHB2Q9Y5E7 798 aa16.69■□□□□ 0.26
ATP2A3-205ENST00000397041 PCDHGC5Q9Y5F6 944 aa16.69■□□□□ 0.26
ATP2A3-205ENST00000397041 SPATA31D1Q6ZQQ2 1576 aa16.69■□□□□ 0.26
ATP2A3-205ENST00000397041 H3BRJ5 948 aa16.69■□□□□ 0.26
ATP2A3-205ENST00000397041 ITGB3BPQ13352 177 aaPredicted RBP16.69■□□□□ 0.26
ATP2A3-205ENST00000397041 SNRNP48Q6IEG0 339 aaKnown RBP16.69■□□□□ 0.26
ATP2A3-205ENST00000397041 RCOR2Q8IZ40 523 aa16.69■□□□□ 0.26
ATP2A3-205ENST00000397041 CNPY4Q8N129 248 aa16.69■□□□□ 0.26
ATP2A3-205ENST00000397041 ZKSCAN4Q969J2 545 aaPredicted RBP16.69■□□□□ 0.26
ATP2A3-205ENST00000397041 ESRRGP62508 458 aa16.68■□□□□ 0.26
ATP2A3-205ENST00000397041 CRYMQ14894 314 aa16.68■□□□□ 0.26
ATP2A3-205ENST00000397041 ZNF568Q3ZCX4 644 aa16.68■□□□□ 0.26
ATP2A3-205ENST00000397041 OR6B3Q8NGW1 331 aa16.68■□□□□ 0.26
ATP2A3-205ENST00000397041 SLC35C1Q96A29 364 aa16.68■□□□□ 0.26
ATP2A3-205ENST00000397041 WWP1Q9H0M0 922 aa16.68■□□□□ 0.26
ATP2A3-205ENST00000397041 SCAF8Q9UPN6 1271 aaKnown RBP16.68■□□□□ 0.26
ATP2A3-205ENST00000397041 ZNF263O14978 683 aa16.68■□□□□ 0.26
ATP2A3-205ENST00000397041 CNGA1P29973 690 aa16.68■□□□□ 0.26
ATP2A3-205ENST00000397041 SLC47A2Q86VL8 602 aa16.68■□□□□ 0.26
ATP2A3-205ENST00000397041 MSL3Q8N5Y2 521 aaKnown RBP16.68■□□□□ 0.26
ATP2A3-205ENST00000397041 BAP1Q92560 729 aa16.68■□□□□ 0.26
ATP2A3-205ENST00000397041 RIOX1Q9H6W3 641 aa16.68■□□□□ 0.26
ATP2A3-205ENST00000397041 CSADQ9Y600 493 aa16.68■□□□□ 0.26
ATP2A3-205ENST00000397041 SHBGP04278 402 aa16.68■□□□□ 0.26
ATP2A3-205ENST00000397041 SFNP31947 248 aa16.68■□□□□ 0.26
ATP2A3-205ENST00000397041 SPP2Q13103 211 aa16.68■□□□□ 0.26
ATP2A3-205ENST00000397041 GRM1Q13255 1194 aa16.68■□□□□ 0.26
ATP2A3-205ENST00000397041 CCNYL1Q8N7R7 359 aa16.68■□□□□ 0.26
ATP2A3-205ENST00000397041 NKX2-3Q8TAU0 364 aa16.68■□□□□ 0.26
ATP2A3-205ENST00000397041 DHX38Q92620 1227 aaKnown RBP16.68■□□□□ 0.26
ATP2A3-205ENST00000397041 ARHGEF26Q96DR7 871 aa16.68■□□□□ 0.26
ATP2A3-205ENST00000397041 MASTLQ96GX5 879 aa16.68■□□□□ 0.26
ATP2A3-205ENST00000397041 KIF9Q9HAQ2 790 aa16.68■□□□□ 0.26
ATP2A3-205ENST00000397041 XPO7Q9UIA9 1087 aaKnown RBP16.68■□□□□ 0.26
ATP2A3-205ENST00000397041 OPLAHO14841 1288 aa16.67■□□□□ 0.26
ATP2A3-205ENST00000397041 CST8O60676 142 aa16.67■□□□□ 0.26
ATP2A3-205ENST00000397041 RANBP1P43487 201 aa16.67■□□□□ 0.26
ATP2A3-205ENST00000397041 ZBTB10Q96DT7 871 aa16.67■□□□□ 0.26
ATP2A3-205ENST00000397041 SHCBP1LQ9BZQ2 653 aa16.67■□□□□ 0.26
ATP2A3-205ENST00000397041 E2F8A0AVK6 867 aa16.67■□□□□ 0.26
ATP2A3-205ENST00000397041 HLA-DRAP01903 254 aa16.67■□□□□ 0.26
ATP2A3-205ENST00000397041 PYGMP11217 842 aa16.67■□□□□ 0.26
ATP2A3-205ENST00000397041 PAX7P23759 505 aa16.67■□□□□ 0.26
ATP2A3-205ENST00000397041 LRRC55Q6ZSA7 311 aa16.67■□□□□ 0.26
ATP2A3-205ENST00000397041 SLC5A5Q92911 643 aa16.67■□□□□ 0.26
ATP2A3-205ENST00000397041 THEGQ9P2T0 379 aa16.67■□□□□ 0.26
ATP2A3-205ENST00000397041 RRM1P23921 792 aa16.67■□□□□ 0.26
ATP2A3-205ENST00000397041 TYK2P29597 1187 aa16.67■□□□□ 0.26
ATP2A3-205ENST00000397041 CA8P35219 290 aa16.67■□□□□ 0.26
ATP2A3-205ENST00000397041 SERPINB4P48594 390 aa16.67■□□□□ 0.26
ATP2A3-205ENST00000397041 CASP5P51878 434 aa16.67■□□□□ 0.26
ATP2A3-205ENST00000397041 ATXN3P54252 364 aaPredicted RBP16.67■□□□□ 0.26
ATP2A3-205ENST00000397041 SESN2P58004 480 aaPredicted RBP16.67■□□□□ 0.26
ATP2A3-205ENST00000397041 STX1BP61266 288 aa16.67■□□□□ 0.26
ATP2A3-205ENST00000397041 PTK7Q13308 1070 aa16.67■□□□□ 0.26
ATP2A3-205ENST00000397041 CUL3Q13618 768 aa16.67■□□□□ 0.26
ATP2A3-205ENST00000397041 WDR72Q3MJ13 1102 aa16.67■□□□□ 0.26
ATP2A3-205ENST00000397041 NAIF1Q69YI7 327 aaPredicted RBP16.67■□□□□ 0.26
ATP2A3-205ENST00000397041 NLRP9Q7RTR0 991 aa16.67■□□□□ 0.26
ATP2A3-205ENST00000397041 MTBPQ96DY7 904 aa16.67■□□□□ 0.26
ATP2A3-205ENST00000397041 POLR3CQ9BUI4 534 aaPredicted RBP16.67■□□□□ 0.26
ATP2A3-205ENST00000397041 ABCF3Q9NUQ8 709 aa16.67■□□□□ 0.26
ATP2A3-205ENST00000397041 DDX56Q9NY93 547 aaKnown RBP16.67■□□□□ 0.26
ATP2A3-205ENST00000397041 RIMS1Q86UR5 1692 aaKnown RBP16.67■□□□□ 0.26
ATP2A3-205ENST00000397041 LOC100653049A0A140TA62 436 aa16.67■□□□□ 0.26
ATP2A3-205ENST00000397041 RIPK2O43353 540 aa16.67■□□□□ 0.26
ATP2A3-205ENST00000397041 KRT34O76011 436 aa16.67■□□□□ 0.26
ATP2A3-205ENST00000397041 CTCFP49711 727 aaPredicted RBP16.67■□□□□ 0.26
ATP2A3-205ENST00000397041 IRX1P78414 480 aaPredicted RBP16.67■□□□□ 0.26
ATP2A3-205ENST00000397041 HIC1Q14526 733 aa16.67■□□□□ 0.26
ATP2A3-205ENST00000397041 RCN1Q15293 331 aa16.67■□□□□ 0.26
ATP2A3-205ENST00000397041 RYBPQ8N488 228 aaPredicted RBP16.67■□□□□ 0.26
ATP2A3-205ENST00000397041 PRCCQ92733 491 aaPredicted RBP16.67■□□□□ 0.26
ATP2A3-205ENST00000397041 LRRC4Q9HBW1 653 aa16.67■□□□□ 0.26
ATP2A3-205ENST00000397041 HEY2Q9UBP5 337 aa16.67■□□□□ 0.26
ATP2A3-205ENST00000397041 KCNN4O15554 427 aa16.66■□□□□ 0.26
ATP2A3-205ENST00000397041 EEF1B2P24534 225 aaKnown RBP16.66■□□□□ 0.26
ATP2A3-205ENST00000397041 SDC4P31431 198 aa16.66■□□□□ 0.26
ATP2A3-205ENST00000397041 ABCD1P33897 745 aa16.66■□□□□ 0.26
ATP2A3-205ENST00000397041 THOC5Q13769 683 aaKnown RBP16.66■□□□□ 0.26
ATP2A3-205ENST00000397041 KRT35Q92764 455 aa16.66■□□□□ 0.26
ATP2A3-205ENST00000397041 RPS6KC1Q96S38 1066 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms