RNA–Protein interactions for RNA: ENST00000396856.5

GAPDH-202, Transcript of glyceraldehyde-3-phosphate dehydrogenase, humanhuman

TSL 5 BASIC

Gene GAPDH, Length 1,266 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Exosome, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPDH-202ENST00000396856 FGFR3P22607 806 aa13.2□□□□□ -0.3
GAPDH-202ENST00000396856 HOXA9P31269 272 aa13.2□□□□□ -0.3
GAPDH-202ENST00000396856 ABCD1P33897 745 aa13.2□□□□□ -0.3
GAPDH-202ENST00000396856 TDGQ13569 410 aa13.2□□□□□ -0.3
GAPDH-202ENST00000396856 SF3A1Q15459 793 aaKnown RBP13.2□□□□□ -0.3
GAPDH-202ENST00000396856 RSPO4Q2I0M5 234 aaPredicted RBP13.2□□□□□ -0.3
GAPDH-202ENST00000396856 SPATA31D4Q6ZUB0 917 aa13.2□□□□□ -0.3
GAPDH-202ENST00000396856 ANKS3Q6ZW76 656 aa13.2□□□□□ -0.3
GAPDH-202ENST00000396856 RTL10Q7L3V2 364 aa13.2□□□□□ -0.3
GAPDH-202ENST00000396856 RUBCNQ92622 972 aa13.2□□□□□ -0.3
GAPDH-202ENST00000396856 ZNF707Q96C28 371 aaPredicted RBP13.2□□□□□ -0.3
GAPDH-202ENST00000396856 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.2□□□□□ -0.3
GAPDH-202ENST00000396856 DLGAP2Q9P1A6 1054 aa13.2□□□□□ -0.3
GAPDH-202ENST00000396856 CNTN3Q9P232 1028 aa13.2□□□□□ -0.3
GAPDH-202ENST00000396856 IGSF9Q9P2J2 1179 aa13.2□□□□□ -0.3
GAPDH-202ENST00000396856 ANKFY1Q9P2R3 1169 aa13.2□□□□□ -0.3
GAPDH-202ENST00000396856 FBXW11Q9UKB1 542 aa13.2□□□□□ -0.3
GAPDH-202ENST00000396856 DUSP12Q9UNI6 340 aa13.2□□□□□ -0.3
GAPDH-202ENST00000396856 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.2□□□□□ -0.3
GAPDH-202ENST00000396856 GBP2P32456 591 aaPredicted RBP13.19□□□□□ -0.3
GAPDH-202ENST00000396856 RPL9P32969 192 aaKnown RBP13.19□□□□□ -0.3
GAPDH-202ENST00000396856 NCKAP1LP55160 1127 aa13.19□□□□□ -0.3
GAPDH-202ENST00000396856 MCL1Q07820 350 aa13.19□□□□□ -0.3
GAPDH-202ENST00000396856 RAB33AQ14088 237 aa13.19□□□□□ -0.3
GAPDH-202ENST00000396856 KYAT1Q16773 422 aa13.19□□□□□ -0.3
GAPDH-202ENST00000396856 UVSSAQ2YD98 709 aa13.19□□□□□ -0.3
GAPDH-202ENST00000396856 ARSHQ5FYA8 562 aa13.19□□□□□ -0.3
GAPDH-202ENST00000396856 GPBP1Q86WP2 473 aa13.19□□□□□ -0.3
GAPDH-202ENST00000396856 SIX5Q8N196 739 aa13.19□□□□□ -0.3
GAPDH-202ENST00000396856 NXPE3Q969Y0 559 aa13.19□□□□□ -0.3
GAPDH-202ENST00000396856 BICD1Q96G01 975 aa13.19□□□□□ -0.3
GAPDH-202ENST00000396856 INTS4Q96HW7 963 aaKnown RBP13.19□□□□□ -0.3
GAPDH-202ENST00000396856 REEP2Q9BRK0 252 aa13.19□□□□□ -0.3
GAPDH-202ENST00000396856 PLEKHA5Q9HAU0 1116 aa13.19□□□□□ -0.3
GAPDH-202ENST00000396856 KCNK12Q9HB15 430 aa13.19□□□□□ -0.3
GAPDH-202ENST00000396856 GOLGA2P5Q9HBQ8 144 aa13.19□□□□□ -0.3
GAPDH-202ENST00000396856 EPS15L1Q9UBC2 864 aa13.19□□□□□ -0.3
GAPDH-202ENST00000396856 MTRRQ9UBK8 725 aa13.19□□□□□ -0.3
GAPDH-202ENST00000396856 BACE2Q9Y5Z0 518 aa13.19□□□□□ -0.3
GAPDH-202ENST00000396856 PODXLO00592 558 aa13.18□□□□□ -0.3
GAPDH-202ENST00000396856 XYLBO75191 536 aa13.18□□□□□ -0.3
GAPDH-202ENST00000396856 FAM13AO94988 1023 aa13.18□□□□□ -0.3
GAPDH-202ENST00000396856 KRT18P05783 430 aaKnown RBP13.18□□□□□ -0.3
GAPDH-202ENST00000396856 POU2F2P09086 479 aa13.18□□□□□ -0.3
GAPDH-202ENST00000396856 MYBP10242 640 aa13.18□□□□□ -0.3
GAPDH-202ENST00000396856 HARSP12081 509 aaKnown RBP13.18□□□□□ -0.3
GAPDH-202ENST00000396856 PLCG1P19174 1290 aa13.18□□□□□ -0.3
GAPDH-202ENST00000396856 ZNF131P52739 623 aa13.18□□□□□ -0.3
GAPDH-202ENST00000396856 ATXN1P54253 815 aaKnown RBP13.18□□□□□ -0.3
GAPDH-202ENST00000396856 PPM1LQ5SGD2 360 aa13.18□□□□□ -0.3
GAPDH-202ENST00000396856 HAUS6Q7Z4H7 955 aa13.18□□□□□ -0.3
GAPDH-202ENST00000396856 LARP4BQ92615 738 aaKnown RBP13.18□□□□□ -0.3
GAPDH-202ENST00000396856 ZBTB45Q96K62 511 aaPredicted RBP13.18□□□□□ -0.3
GAPDH-202ENST00000396856 ZMAT2Q96NC0 199 aaKnown RBP13.18□□□□□ -0.3
GAPDH-202ENST00000396856 CCSER1Q9C0I3 900 aa13.18□□□□□ -0.3
GAPDH-202ENST00000396856 PARVGQ9HBI0 331 aa13.18□□□□□ -0.3
GAPDH-202ENST00000396856 BLOC1S4Q9NUP1 217 aa13.18□□□□□ -0.3
GAPDH-202ENST00000396856 ZFP37Q9Y6Q3 630 aaPredicted RBP13.18□□□□□ -0.3
GAPDH-202ENST00000396856 NPHP3-ACAD11A0A0J9YXS1 232 aa13.17□□□□□ -0.3
GAPDH-202ENST00000396856 K7ENM7 598 aa13.17□□□□□ -0.3
GAPDH-202ENST00000396856 HNRNPDLO14979 420 aaKnown RBP13.17□□□□□ -0.3
GAPDH-202ENST00000396856 SYN3O14994 580 aa13.17□□□□□ -0.3
GAPDH-202ENST00000396856 NARSO43776 548 aaKnown RBP13.17□□□□□ -0.3
GAPDH-202ENST00000396856 N4BP1O75113 896 aaKnown RBP13.17□□□□□ -0.3
GAPDH-202ENST00000396856 TBCAO75347 108 aaKnown RBP13.17□□□□□ -0.3
GAPDH-202ENST00000396856 PIGRP01833 764 aa13.17□□□□□ -0.3
GAPDH-202ENST00000396856 C8AP07357 584 aa13.17□□□□□ -0.3
GAPDH-202ENST00000396856 CLTAP09496 248 aa13.17□□□□□ -0.3
GAPDH-202ENST00000396856 SP9P0CG40 484 aa13.17□□□□□ -0.3
GAPDH-202ENST00000396856 TKTP29401 623 aaKnown RBP13.17□□□□□ -0.3
GAPDH-202ENST00000396856 OR1D2P34982 312 aa13.17□□□□□ -0.3
GAPDH-202ENST00000396856 MATR3P43243 847 aaKnown RBP eCLIP13.17□□□□□ -0.3
GAPDH-202ENST00000396856 LIG4P49917 911 aa13.17□□□□□ -0.3
GAPDH-202ENST00000396856 SOX4Q06945 474 aaPredicted RBP13.17□□□□□ -0.3
GAPDH-202ENST00000396856 DHX8Q14562 1220 aaKnown RBP13.17□□□□□ -0.3
GAPDH-202ENST00000396856 KARSQ15046 597 aaKnown RBP13.17□□□□□ -0.3
GAPDH-202ENST00000396856 SLC10A6Q3KNW5 377 aa13.17□□□□□ -0.3
GAPDH-202ENST00000396856 CD300LGQ6UXG3 332 aa13.17□□□□□ -0.3
GAPDH-202ENST00000396856 MAML2Q8IZL2 1156 aaPredicted RBP13.17□□□□□ -0.3
GAPDH-202ENST00000396856 MYCT1Q8N699 235 aa13.17□□□□□ -0.3
GAPDH-202ENST00000396856 C3orf58Q8NDZ4 430 aa13.17□□□□□ -0.3
GAPDH-202ENST00000396856 RAD54LQ92698 747 aa13.17□□□□□ -0.3
GAPDH-202ENST00000396856 TSPAN18Q96SJ8 248 aa13.17□□□□□ -0.3
GAPDH-202ENST00000396856 WNT16Q9UBV4 365 aa13.17□□□□□ -0.3
GAPDH-202ENST00000396856 TBX20Q9UMR3 447 aa13.17□□□□□ -0.3
GAPDH-202ENST00000396856 NUB1Q9Y5A7 615 aa13.17□□□□□ -0.3
GAPDH-202ENST00000396856 CDY1Q9Y6F8 540 aa13.17□□□□□ -0.3
GAPDH-202ENST00000396856 ASPMQ8IZT6 3477 aa13.16□□□□□ -0.3
GAPDH-202ENST00000396856 C2orf16Q68DN1 1984 aa13.16□□□□□ -0.3
GAPDH-202ENST00000396856 H7C4K7 107 aa13.16□□□□□ -0.3
GAPDH-202ENST00000396856 ADAM12O43184 909 aa13.16□□□□□ -0.3
GAPDH-202ENST00000396856 TRAK2O60296 914 aa13.16□□□□□ -0.3
GAPDH-202ENST00000396856 SYT1P21579 422 aa13.16□□□□□ -0.3
GAPDH-202ENST00000396856 FSHRP23945 695 aa13.16□□□□□ -0.3
GAPDH-202ENST00000396856 DDIT3P35638 169 aa13.16□□□□□ -0.3
GAPDH-202ENST00000396856 TXLNAP40222 546 aa13.16□□□□□ -0.3
GAPDH-202ENST00000396856 BRCC3P46736 316 aa13.16□□□□□ -0.3
GAPDH-202ENST00000396856 GRIN1Q05586 938 aa13.16□□□□□ -0.3
GAPDH-202ENST00000396856 MCM6Q14566 821 aa13.16□□□□□ -0.3
GAPDH-202ENST00000396856 PTPAQ15257 358 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms