RNA–Protein interactions for RNA: ENST00000396603.6

CLTA-203, Transcript of clathrin light chain A, humanhuman

TSL 1 (best) BASIC

Gene CLTA, Length 1,090 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTA-203ENST00000396603 TOB1P50616 345 aaPredicted RBP17.84■□□□□ 0.45
CLTA-203ENST00000396603 NTHL1P78549 312 aa17.84■□□□□ 0.45
CLTA-203ENST00000396603 ROR1Q01973 937 aa17.84■□□□□ 0.45
CLTA-203ENST00000396603 MRPL58Q14197 206 aaKnown RBP17.84■□□□□ 0.45
CLTA-203ENST00000396603 MLF2Q15773 248 aaPredicted RBP17.84■□□□□ 0.45
CLTA-203ENST00000396603 RILPL1Q5EBL4 403 aa17.84■□□□□ 0.45
CLTA-203ENST00000396603 RINT1Q6NUQ1 792 aa17.84■□□□□ 0.45
CLTA-203ENST00000396603 C1orf186Q6ZWK4 172 aa17.84■□□□□ 0.45
CLTA-203ENST00000396603 TCEAL8Q8IYN2 117 aa17.84■□□□□ 0.45
CLTA-203ENST00000396603 C3orf58Q8NDZ4 430 aa17.84■□□□□ 0.45
CLTA-203ENST00000396603 ITFG1Q8TB96 612 aa17.84■□□□□ 0.45
CLTA-203ENST00000396603 INTS4Q96HW7 963 aaKnown RBP17.84■□□□□ 0.45
CLTA-203ENST00000396603 NELL2Q99435 816 aa17.84■□□□□ 0.45
CLTA-203ENST00000396603 OXCT2Q9BYC2 517 aaPredicted RBP17.84■□□□□ 0.45
CLTA-203ENST00000396603 MRPS23Q9Y3D9 190 aaKnown RBP17.84■□□□□ 0.45
CLTA-203ENST00000396603 E9PMD0 336 aa17.83■□□□□ 0.44
CLTA-203ENST00000396603 H0YCG3 227 aa17.83■□□□□ 0.44
CLTA-203ENST00000396603 ABLIM1O14639 778 aa17.83■□□□□ 0.44
CLTA-203ENST00000396603 TOM1L1O75674 476 aa17.83■□□□□ 0.44
CLTA-203ENST00000396603 LRG1P02750 347 aa17.83■□□□□ 0.44
CLTA-203ENST00000396603 PTPN2P17706 415 aa17.83■□□□□ 0.44
CLTA-203ENST00000396603 PDCP20941 246 aa17.83■□□□□ 0.44
CLTA-203ENST00000396603 ELF1P32519 619 aa17.83■□□□□ 0.44
CLTA-203ENST00000396603 SMTNP53814 917 aa17.83■□□□□ 0.44
CLTA-203ENST00000396603 SOX4Q06945 474 aaPredicted RBP17.83■□□□□ 0.44
CLTA-203ENST00000396603 MAPK7Q13164 816 aa17.83■□□□□ 0.44
CLTA-203ENST00000396603 SLC44A4Q53GD3 710 aa17.83■□□□□ 0.44
CLTA-203ENST00000396603 VARS2Q5ST30 1063 aaKnown RBP17.83■□□□□ 0.44
CLTA-203ENST00000396603 ZPBP2Q6X784 338 aa17.83■□□□□ 0.44
CLTA-203ENST00000396603 TAS1R3Q7RTX0 852 aa17.83■□□□□ 0.44
CLTA-203ENST00000396603 CEP120Q8N960 986 aa17.83■□□□□ 0.44
CLTA-203ENST00000396603 RPP25Q9BUL9 199 aaKnown RBP17.83■□□□□ 0.44
CLTA-203ENST00000396603 BCO2Q9BYV7 579 aa17.83■□□□□ 0.44
CLTA-203ENST00000396603 GOLGA2P5Q9HBQ8 144 aa17.83■□□□□ 0.44
CLTA-203ENST00000396603 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.83■□□□□ 0.44
CLTA-203ENST00000396603 FBXO4Q9UKT5 387 aa17.83■□□□□ 0.44
CLTA-203ENST00000396603 PCDHB6Q9Y5E3 794 aa17.83■□□□□ 0.44
CLTA-203ENST00000396603 RIF1Q5UIP0 2472 aaKnown RBP17.83■□□□□ 0.44
CLTA-203ENST00000396603 FAM186AA6NE01 2351 aa17.83■□□□□ 0.44
CLTA-203ENST00000396603 H3BQV1 296 aa17.82■□□□□ 0.44
CLTA-203ENST00000396603 ZNF197O14709 1029 aa17.82■□□□□ 0.44
CLTA-203ENST00000396603 SLC26A4O43511 780 aa17.82■□□□□ 0.44
CLTA-203ENST00000396603 DCNP07585 359 aaKnown RBP17.82■□□□□ 0.44
CLTA-203ENST00000396603 HSP90AA1P07900 732 aaKnown RBP17.82■□□□□ 0.44
CLTA-203ENST00000396603 RHOP08100 348 aa17.82■□□□□ 0.44
CLTA-203ENST00000396603 SP9P0CG40 484 aa17.82■□□□□ 0.44
CLTA-203ENST00000396603 GJB2P29033 226 aa17.82■□□□□ 0.44
CLTA-203ENST00000396603 BRCC3P46736 316 aa17.82■□□□□ 0.44
CLTA-203ENST00000396603 STRN3Q13033 797 aa17.82■□□□□ 0.44
CLTA-203ENST00000396603 NBR1Q14596 966 aa17.82■□□□□ 0.44
CLTA-203ENST00000396603 LEMD2Q8NC56 503 aa17.82■□□□□ 0.44
CLTA-203ENST00000396603 APPL2Q8NEU8 664 aa17.82■□□□□ 0.44
CLTA-203ENST00000396603 DNASE1L2Q92874 299 aa17.82■□□□□ 0.44
CLTA-203ENST00000396603 ELSPBP1Q96BH3 223 aa17.82■□□□□ 0.44
CLTA-203ENST00000396603 SUSD3Q96L08 255 aa17.82■□□□□ 0.44
CLTA-203ENST00000396603 ZMAT2Q96NC0 199 aaKnown RBP17.82■□□□□ 0.44
CLTA-203ENST00000396603 TSPAN18Q96SJ8 248 aa17.82■□□□□ 0.44
CLTA-203ENST00000396603 TCHPQ9BT92 498 aa17.82■□□□□ 0.44
CLTA-203ENST00000396603 TARS2Q9BW92 718 aaKnown RBP17.82■□□□□ 0.44
CLTA-203ENST00000396603 PLEKHA5Q9HAU0 1116 aa17.82■□□□□ 0.44
CLTA-203ENST00000396603 NUB1Q9Y5A7 615 aa17.82■□□□□ 0.44
CLTA-203ENST00000396603 PTPRZ1P23471 2315 aaPredicted RBP17.82■□□□□ 0.44
CLTA-203ENST00000396603 WDR27A2RRH5 827 aa17.81■□□□□ 0.44
CLTA-203ENST00000396603 NCAM2O15394 837 aa17.81■□□□□ 0.44
CLTA-203ENST00000396603 PLS3P13797 630 aa17.81■□□□□ 0.44
CLTA-203ENST00000396603 KYAT1Q16773 422 aa17.81■□□□□ 0.44
CLTA-203ENST00000396603 SPECC1Q5M775 1068 aa17.81■□□□□ 0.44
CLTA-203ENST00000396603 ZNF280DQ6N043 979 aa17.81■□□□□ 0.44
CLTA-203ENST00000396603 SYT2Q8N9I0 419 aaPredicted RBP17.81■□□□□ 0.44
CLTA-203ENST00000396603 MMTAG2Q9BU76 263 aaKnown RBP17.81■□□□□ 0.44
CLTA-203ENST00000396603 RUSC1Q9BVN2 902 aa17.81■□□□□ 0.44
CLTA-203ENST00000396603 FOXQ1Q9C009 403 aa17.81■□□□□ 0.44
CLTA-203ENST00000396603 HCFC1R1Q9NWW0 138 aa17.81■□□□□ 0.44
CLTA-203ENST00000396603 MRPS17Q9Y2R5 130 aaKnown RBP17.81■□□□□ 0.44
CLTA-203ENST00000396603 GVINP1Q7Z2Y8 2422 aa17.8■□□□□ 0.44
CLTA-203ENST00000396603 PRRG1O14668 218 aa17.8■□□□□ 0.44
CLTA-203ENST00000396603 SPTLC1O15269 473 aa17.8■□□□□ 0.44
CLTA-203ENST00000396603 GLULP15104 373 aa17.8■□□□□ 0.44
CLTA-203ENST00000396603 RPS9P46781 194 aaKnown RBP17.8■□□□□ 0.44
CLTA-203ENST00000396603 ID4P47928 161 aa17.8■□□□□ 0.44
CLTA-203ENST00000396603 ATP2C1P98194 919 aaPredicted RBP17.8■□□□□ 0.44
CLTA-203ENST00000396603 MCL1Q07820 350 aa17.8■□□□□ 0.44
CLTA-203ENST00000396603 SNW1Q13573 536 aaKnown RBP17.8■□□□□ 0.44
CLTA-203ENST00000396603 NOLC1Q14978 699 aaKnown RBP eCLIP17.8■□□□□ 0.441e-20■■■■□ 24.6
CLTA-203ENST00000396603 ARL6IP4Q66PJ3 421 aaKnown RBP17.8■□□□□ 0.44
CLTA-203ENST00000396603 TMEM161BQ8NDZ6 487 aa17.8■□□□□ 0.44
CLTA-203ENST00000396603 CLDN23Q96B33 292 aa17.8■□□□□ 0.44
CLTA-203ENST00000396603 POLD4Q9HCU8 107 aa17.8■□□□□ 0.44
CLTA-203ENST00000396603 LTB4R2Q9NPC1 389 aa17.8■□□□□ 0.44
CLTA-203ENST00000396603 TRPV5Q9NQA5 729 aa17.8■□□□□ 0.44
CLTA-203ENST00000396603 LARSQ9P2J5 1176 aaKnown RBP17.8■□□□□ 0.44
CLTA-203ENST00000396603 MYH15Q9Y2K3 1946 aa17.8■□□□□ 0.44
CLTA-203ENST00000396603 CYP3A5P20815 502 aa17.79■□□□□ 0.44
CLTA-203ENST00000396603 PAX3P23760 479 aa17.79■□□□□ 0.44
CLTA-203ENST00000396603 IGFBP6P24592 240 aaPredicted RBP17.79■□□□□ 0.44
CLTA-203ENST00000396603 OSTNP61366 133 aa17.79■□□□□ 0.44
CLTA-203ENST00000396603 IL17AQ16552 155 aa17.79■□□□□ 0.44
CLTA-203ENST00000396603 SLC5A9Q2M3M2 681 aa17.79■□□□□ 0.44
CLTA-203ENST00000396603 PRSS36Q5K4E3 855 aa17.79■□□□□ 0.44
CLTA-203ENST00000396603 ZBTB41Q5SVQ8 909 aa17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms