RNA–Protein interactions for RNA: ENST00000396548.5

TRIM39-204, Transcript of tripartite motif containing 39, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TRIM39, Length 3,198 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-204ENST00000396548 PIN4Q9Y237 131 aaKnown RBP13.7□□□□□ -0.22
TRIM39-204ENST00000396548 A0A087X0T9 212 aa13.69□□□□□ -0.22
TRIM39-204ENST00000396548 ARVCFO00192 962 aa13.69□□□□□ -0.22
TRIM39-204ENST00000396548 FAM228BP0C875 321 aa13.69□□□□□ -0.22
TRIM39-204ENST00000396548 CCL5P13501 91 aa13.69□□□□□ -0.22
TRIM39-204ENST00000396548 CYP27A1Q02318 531 aa13.69□□□□□ -0.22
TRIM39-204ENST00000396548 FMNL3Q8IVF7 1028 aa13.69□□□□□ -0.22
TRIM39-204ENST00000396548 PPM1KQ8N3J5 372 aa13.69□□□□□ -0.22
TRIM39-204ENST00000396548 FAM81BQ96LP2 452 aa13.69□□□□□ -0.22
TRIM39-204ENST00000396548 C16orf45Q96MC5 204 aaPredicted RBP13.69□□□□□ -0.22
TRIM39-204ENST00000396548 ZMAT2Q96NC0 199 aaKnown RBP13.69□□□□□ -0.22
TRIM39-204ENST00000396548 CRISPLD2Q9H0B8 497 aa13.69□□□□□ -0.22
TRIM39-204ENST00000396548 TRPV6Q9H1D0 765 aa13.69□□□□□ -0.22
TRIM39-204ENST00000396548 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.69□□□□□ -0.22
TRIM39-204ENST00000396548 CHST12Q9NRB3 414 aa13.69□□□□□ -0.22
TRIM39-204ENST00000396548 NOCTQ9UK39 431 aaKnown RBP13.69□□□□□ -0.22
TRIM39-204ENST00000396548 ATP8B3O60423 1300 aa13.69□□□□□ -0.22
TRIM39-204ENST00000396548 PJA2O43164 708 aa13.69□□□□□ -0.22
TRIM39-204ENST00000396548 THPOP40225 353 aa13.69□□□□□ -0.22
TRIM39-204ENST00000396548 MYL6P60660 151 aa13.69□□□□□ -0.22
TRIM39-204ENST00000396548 KRT83P78385 493 aa13.69□□□□□ -0.22
TRIM39-204ENST00000396548 ARID5AQ03989 594 aa13.69□□□□□ -0.22
TRIM39-204ENST00000396548 BIRC3Q13489 604 aa13.69□□□□□ -0.22
TRIM39-204ENST00000396548 DSC3Q14574 896 aa13.69□□□□□ -0.22
TRIM39-204ENST00000396548 LPIN1Q14693 890 aa13.69□□□□□ -0.22
TRIM39-204ENST00000396548 LNX1Q8TBB1 728 aaPredicted RBP13.69□□□□□ -0.22
TRIM39-204ENST00000396548 TRAIPQ9BWF2 469 aa13.69□□□□□ -0.22
TRIM39-204ENST00000396548 SEZ6LQ9BYH1 1024 aa13.69□□□□□ -0.22
TRIM39-204ENST00000396548 VRTNQ9H8Y1 702 aa13.69□□□□□ -0.22
TRIM39-204ENST00000396548 TFR2Q9UP52 801 aa13.69□□□□□ -0.22
TRIM39-204ENST00000396548 PCDHA13Q9Y5I0 950 aa13.69□□□□□ -0.22
TRIM39-204ENST00000396548 SQORQ9Y6N5 450 aa13.69□□□□□ -0.22
TRIM39-204ENST00000396548 DDX3XO00571 662 aaKnown RBP eCLIP13.69□□□□□ -0.22
TRIM39-204ENST00000396548 APBB1IPQ7Z5R6 666 aaPredicted RBP13.69□□□□□ -0.22
TRIM39-204ENST00000396548 DDX1Q92499 740 aaKnown RBP13.69□□□□□ -0.22
TRIM39-204ENST00000396548 FAM212AQ96EL1 285 aa13.69□□□□□ -0.22
TRIM39-204ENST00000396548 LACRTQ9GZZ8 138 aa13.69□□□□□ -0.22
TRIM39-204ENST00000396548 STARD7Q9NQZ5 370 aa13.69□□□□□ -0.22
TRIM39-204ENST00000396548 HES2Q9Y543 173 aa13.69□□□□□ -0.22
TRIM39-204ENST00000396548 M0QZ92 97 aa13.68□□□□□ -0.22
TRIM39-204ENST00000396548 CD4P01730 458 aa13.68□□□□□ -0.22
TRIM39-204ENST00000396548 VAV2P52735 878 aa13.68□□□□□ -0.22
TRIM39-204ENST00000396548 TFAMQ00059 246 aaKnown RBP13.68□□□□□ -0.22
TRIM39-204ENST00000396548 CUL2Q13617 745 aa13.68□□□□□ -0.22
TRIM39-204ENST00000396548 PTPN14Q15678 1187 aa13.68□□□□□ -0.22
TRIM39-204ENST00000396548 SGSM1Q2NKQ1 1148 aa13.68□□□□□ -0.22
TRIM39-204ENST00000396548 ZNF618Q5T7W0 954 aa13.68□□□□□ -0.22
TRIM39-204ENST00000396548 FAXDC2Q96IV6 333 aa13.68□□□□□ -0.22
TRIM39-204ENST00000396548 ANKRD36BP1Q96IX9 119 aa13.68□□□□□ -0.22
TRIM39-204ENST00000396548 RNF39Q9H2S5 420 aa13.68□□□□□ -0.22
TRIM39-204ENST00000396548 IPPQ9Y573 584 aa13.68□□□□□ -0.22
TRIM39-204ENST00000396548 TANC1Q9C0D5 1861 aa13.68□□□□□ -0.22
TRIM39-204ENST00000396548 STAU1O95793 577 aaKnown RBP13.68□□□□□ -0.22
TRIM39-204ENST00000396548 CTSHP09668 335 aa13.68□□□□□ -0.22
TRIM39-204ENST00000396548 CKBP12277 381 aa13.68□□□□□ -0.22
TRIM39-204ENST00000396548 CHRNB2P17787 502 aa13.68□□□□□ -0.22
TRIM39-204ENST00000396548 NOP14P78316 857 aaKnown RBP13.68□□□□□ -0.22
TRIM39-204ENST00000396548 MBTPS1Q14703 1052 aa13.68□□□□□ -0.22
TRIM39-204ENST00000396548 WDR44Q5JSH3 913 aa13.68□□□□□ -0.22
TRIM39-204ENST00000396548 CCDC94Q9BW85 323 aaPredicted RBP13.68□□□□□ -0.22
TRIM39-204ENST00000396548 C1orf112Q9NSG2 853 aa13.68□□□□□ -0.22
TRIM39-204ENST00000396548 KBTBD13C9JR72 458 aa13.67□□□□□ -0.22
TRIM39-204ENST00000396548 RPS6KA5O75582 802 aa13.67□□□□□ -0.22
TRIM39-204ENST00000396548 SGPL1O95470 568 aa13.67□□□□□ -0.22
TRIM39-204ENST00000396548 TNNC2P02585 160 aa13.67□□□□□ -0.22
TRIM39-204ENST00000396548 TMEM191BP0C7N4 346 aa13.67□□□□□ -0.22
TRIM39-204ENST00000396548 HSPA8P11142 646 aaKnown RBP13.67□□□□□ -0.22
TRIM39-204ENST00000396548 KCNE1P15382 129 aa13.67□□□□□ -0.22
TRIM39-204ENST00000396548 ASPAP45381 313 aa13.67□□□□□ -0.22
TRIM39-204ENST00000396548 ZNF132P52740 706 aa13.67□□□□□ -0.22
TRIM39-204ENST00000396548 BMS1Q14692 1282 aaKnown RBP13.67□□□□□ -0.22
TRIM39-204ENST00000396548 TMEM132DQ14C87 1099 aa13.67□□□□□ -0.22
TRIM39-204ENST00000396548 TDRD12Q587J7 1177 aaKnown RBP13.67□□□□□ -0.22
TRIM39-204ENST00000396548 EPS8L1Q8TE68 723 aa13.67□□□□□ -0.22
TRIM39-204ENST00000396548 TAF4BQ92750 862 aa13.67□□□□□ -0.22
TRIM39-204ENST00000396548 TRIM10Q9UDY6 481 aa13.67□□□□□ -0.22
TRIM39-204ENST00000396548 ADAMTS1Q9UHI8 967 aa13.67□□□□□ -0.22
TRIM39-204ENST00000396548 MGEA5O60502 916 aa13.67□□□□□ -0.22
TRIM39-204ENST00000396548 TUBB4AP04350 444 aa13.67□□□□□ -0.22
TRIM39-204ENST00000396548 TNNT1P13805 278 aa13.67□□□□□ -0.22
TRIM39-204ENST00000396548 FAM126BQ8IXS8 530 aa13.67□□□□□ -0.22
TRIM39-204ENST00000396548 ZNF333Q96JL9 665 aa13.67□□□□□ -0.22
TRIM39-204ENST00000396548 DEFB118Q96PH6 123 aa13.67□□□□□ -0.22
TRIM39-204ENST00000396548 TSPAN18Q96SJ8 248 aa13.67□□□□□ -0.22
TRIM39-204ENST00000396548 BCO2Q9BYV7 579 aa13.67□□□□□ -0.22
TRIM39-204ENST00000396548 NAGPAQ9UK23 515 aa13.67□□□□□ -0.22
TRIM39-204ENST00000396548 AKR1B10O60218 316 aa13.67□□□□□ -0.22
TRIM39-204ENST00000396548 RECQL4O94761 1208 aa13.67□□□□□ -0.22
TRIM39-204ENST00000396548 MRPL10Q7Z7H8 261 aaKnown RBP13.67□□□□□ -0.22
TRIM39-204ENST00000396548 NOP9Q86U38 636 aaKnown RBP13.67□□□□□ -0.22
TRIM39-204ENST00000396548 SLC47A2Q86VL8 602 aa13.67□□□□□ -0.22
TRIM39-204ENST00000396548 SLC20A1Q8WUM9 679 aa13.67□□□□□ -0.22
TRIM39-204ENST00000396548 IRX2Q9BZI1 471 aaPredicted RBP13.67□□□□□ -0.22
TRIM39-204ENST00000396548 LZTFL1Q9NQ48 299 aa13.67□□□□□ -0.22
TRIM39-204ENST00000396548 ITGA11Q9UKX5 1188 aa13.67□□□□□ -0.22
TRIM39-204ENST00000396548 PADI3Q9ULW8 664 aa13.67□□□□□ -0.22
TRIM39-204ENST00000396548 GPR182O15218 404 aa13.66□□□□□ -0.22
TRIM39-204ENST00000396548 CYP26A1O43174 497 aa13.66□□□□□ -0.22
TRIM39-204ENST00000396548 TBXAS1P24557 533 aaPredicted RBP13.66□□□□□ -0.22
TRIM39-204ENST00000396548 AKAP5P24588 427 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms