RNA–Protein interactions for RNA: ENST00000395205.6

BBS4-202, Transcript of Bardet-Biedl syndrome 4, humanhuman

TSL 1 (best) BASIC

Gene BBS4, Length 2,450 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BBS4-202ENST00000395205 AIPL1Q9NZN9 384 aa10.65□□□□□ -0.7
BBS4-202ENST00000395205 KLK14Q9P0G3 267 aa10.65□□□□□ -0.7
BBS4-202ENST00000395205 PCDHB2Q9Y5E7 798 aa10.65□□□□□ -0.7
BBS4-202ENST00000395205 RECQL4O94761 1208 aa10.64□□□□□ -0.71
BBS4-202ENST00000395205 SERPING1P05155 500 aa10.64□□□□□ -0.71
BBS4-202ENST00000395205 IBSPP21815 317 aaPredicted RBP10.64□□□□□ -0.71
BBS4-202ENST00000395205 SOX5P35711 763 aa10.64□□□□□ -0.71
BBS4-202ENST00000395205 USP8P40818 1118 aa10.64□□□□□ -0.71
BBS4-202ENST00000395205 JAM2P57087 298 aa10.64□□□□□ -0.71
BBS4-202ENST00000395205 CDK17Q00537 523 aa10.64□□□□□ -0.71
BBS4-202ENST00000395205 KLHL30Q0D2K2 578 aa10.64□□□□□ -0.71
BBS4-202ENST00000395205 TDRD12Q587J7 1177 aaKnown RBP10.64□□□□□ -0.71
BBS4-202ENST00000395205 E4F1Q66K89 784 aaPredicted RBP10.64□□□□□ -0.71
BBS4-202ENST00000395205 TOGARAM2Q6ZUX3 1019 aa10.64□□□□□ -0.71
BBS4-202ENST00000395205 HACE1Q8IYU2 909 aa10.64□□□□□ -0.71
BBS4-202ENST00000395205 SMG8Q8ND04 991 aaKnown RBP10.64□□□□□ -0.71
BBS4-202ENST00000395205 SQORQ9Y6N5 450 aa10.64□□□□□ -0.71
BBS4-202ENST00000395205 DCDC2CA8MYV0 355 aa10.64□□□□□ -0.71
BBS4-202ENST00000395205 F8VZ95 297 aa10.64□□□□□ -0.71
BBS4-202ENST00000395205 FOXN3O00409 490 aaPredicted RBP10.64□□□□□ -0.71
BBS4-202ENST00000395205 GFPT2O94808 682 aa10.64□□□□□ -0.71
BBS4-202ENST00000395205 CD4P01730 458 aa10.64□□□□□ -0.71
BBS4-202ENST00000395205 PNMA6AP0CW24 399 aaPredicted RBP10.64□□□□□ -0.71
BBS4-202ENST00000395205 SELPP16109 830 aa10.64□□□□□ -0.71
BBS4-202ENST00000395205 CYLC1P35663 651 aaPredicted RBP10.64□□□□□ -0.71
BBS4-202ENST00000395205 EIF4A3P38919 411 aaKnown RBP10.64□□□□□ -0.71
BBS4-202ENST00000395205 GJA8P48165 433 aa10.64□□□□□ -0.71
BBS4-202ENST00000395205 MNX1P50219 401 aaPredicted RBP10.64□□□□□ -0.71
BBS4-202ENST00000395205 MYL6P60660 151 aa10.64□□□□□ -0.71
BBS4-202ENST00000395205 SGSM1Q2NKQ1 1148 aa10.64□□□□□ -0.71
BBS4-202ENST00000395205 SCARA3Q6AZY7 606 aa10.64□□□□□ -0.71
BBS4-202ENST00000395205 SPOPLQ6IQ16 392 aa10.64□□□□□ -0.71
BBS4-202ENST00000395205 LRRC8DQ7L1W4 858 aa10.64□□□□□ -0.71
BBS4-202ENST00000395205 HELQQ8TDG4 1101 aa10.64□□□□□ -0.71
BBS4-202ENST00000395205 KAT5Q92993 513 aa10.64□□□□□ -0.71
BBS4-202ENST00000395205 SNX27Q96L92 541 aa10.64□□□□□ -0.71
BBS4-202ENST00000395205 DESI2Q9BSY9 194 aa10.64□□□□□ -0.71
BBS4-202ENST00000395205 TMEM106CQ9BVX2 250 aa10.64□□□□□ -0.71
BBS4-202ENST00000395205 FAM105AQ9NUU6 356 aa10.64□□□□□ -0.71
BBS4-202ENST00000395205 RNF19AQ9NV58 838 aa10.64□□□□□ -0.71
BBS4-202ENST00000395205 ARHGAP20Q9P2F6 1191 aa10.64□□□□□ -0.71
BBS4-202ENST00000395205 EPN1Q9Y6I3 576 aaPredicted RBP10.64□□□□□ -0.71
BBS4-202ENST00000395205 PLEKP08567 350 aaPredicted RBP10.63□□□□□ -0.71
BBS4-202ENST00000395205 CCDC172P0C7W6 258 aa10.63□□□□□ -0.71
BBS4-202ENST00000395205 ITGA4P13612 1032 aa10.63□□□□□ -0.71
BBS4-202ENST00000395205 FERP16591 822 aa10.63□□□□□ -0.71
BBS4-202ENST00000395205 FAM193AP78312 1265 aa10.63□□□□□ -0.71
BBS4-202ENST00000395205 IRF2BP2Q7Z5L9 587 aa10.63□□□□□ -0.71
BBS4-202ENST00000395205 NT5DC4Q86YG4 428 aa10.63□□□□□ -0.71
BBS4-202ENST00000395205 FMNL3Q8IVF7 1028 aa10.63□□□□□ -0.71
BBS4-202ENST00000395205 CCDC170Q8IYT3 715 aa10.63□□□□□ -0.71
BBS4-202ENST00000395205 DIS3LQ8TF46 1054 aaKnown RBP10.63□□□□□ -0.71
BBS4-202ENST00000395205 TSC1Q92574 1164 aa10.63□□□□□ -0.71
BBS4-202ENST00000395205 FAM81BQ96LP2 452 aa10.63□□□□□ -0.71
BBS4-202ENST00000395205 ADAM2Q99965 735 aa10.63□□□□□ -0.71
BBS4-202ENST00000395205 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP10.63□□□□□ -0.71
BBS4-202ENST00000395205 DPP3Q9NY33 737 aa10.63□□□□□ -0.71
BBS4-202ENST00000395205 C2CD2Q9Y426 696 aa10.63□□□□□ -0.71
BBS4-202ENST00000395205 ZSCAN12O43309 604 aa10.63□□□□□ -0.71
BBS4-202ENST00000395205 ITGB3P05106 788 aa10.63□□□□□ -0.71
BBS4-202ENST00000395205 KCNJ6P48051 423 aa10.63□□□□□ -0.71
BBS4-202ENST00000395205 GLRA4Q5JXX5 417 aa10.63□□□□□ -0.71
BBS4-202ENST00000395205 TRAF7Q6Q0C0 670 aa10.63□□□□□ -0.71
BBS4-202ENST00000395205 ALKAL1Q6UXT8 129 aa10.63□□□□□ -0.71
BBS4-202ENST00000395205 ENOSF1Q7L5Y1 443 aa10.63□□□□□ -0.71
BBS4-202ENST00000395205 C1orf127Q8N9H9 656 aa10.63□□□□□ -0.71
BBS4-202ENST00000395205 RNF169Q8NCN4 708 aa10.63□□□□□ -0.71
BBS4-202ENST00000395205 KREMEN1Q96MU8 473 aa10.63□□□□□ -0.71
BBS4-202ENST00000395205 GPR88Q9GZN0 384 aa10.63□□□□□ -0.71
BBS4-202ENST00000395205 CXCL16Q9H2A7 254 aa10.63□□□□□ -0.71
BBS4-202ENST00000395205 HAUS4Q9H6D7 363 aa10.63□□□□□ -0.71
BBS4-202ENST00000395205 APOBEC3GQ9HC16 384 aaKnown RBP10.63□□□□□ -0.71
BBS4-202ENST00000395205 DERAQ9Y315 318 aa10.63□□□□□ -0.71
BBS4-202ENST00000395205 BZW2Q9Y6E2 419 aaKnown RBP10.63□□□□□ -0.71
BBS4-202ENST00000395205 AKR1B10O60218 316 aa10.62□□□□□ -0.71
BBS4-202ENST00000395205 MGEA5O60502 916 aa10.62□□□□□ -0.71
BBS4-202ENST00000395205 NDUFA10O95299 355 aa10.62□□□□□ -0.71
BBS4-202ENST00000395205 IPO7O95373 1038 aaKnown RBP10.62□□□□□ -0.71
BBS4-202ENST00000395205 CCDC175P0C221 793 aa10.62□□□□□ -0.71
BBS4-202ENST00000395205 GUCY2FP51841 1108 aa10.62□□□□□ -0.71
BBS4-202ENST00000395205 NOP14P78316 857 aaKnown RBP10.62□□□□□ -0.71
BBS4-202ENST00000395205 RBP5P82980 135 aa10.62□□□□□ -0.71
BBS4-202ENST00000395205 TLE2Q04725 743 aa10.62□□□□□ -0.71
BBS4-202ENST00000395205 ZNF699Q32M78 642 aa10.62□□□□□ -0.71
BBS4-202ENST00000395205 TRIM60Q495X7 471 aa10.62□□□□□ -0.71
BBS4-202ENST00000395205 HGSNATQ68CP4 663 aa10.62□□□□□ -0.71
BBS4-202ENST00000395205 ANKRD33Q7Z3H0 272 aa10.62□□□□□ -0.71
BBS4-202ENST00000395205 CCAR2Q8N163 923 aaKnown RBP10.62□□□□□ -0.71
BBS4-202ENST00000395205 TMEM130Q8N3G9 435 aa10.62□□□□□ -0.71
BBS4-202ENST00000395205 BEST2Q8NFU1 509 aa10.62□□□□□ -0.71
BBS4-202ENST00000395205 ZMAT2Q96NC0 199 aaKnown RBP10.62□□□□□ -0.71
BBS4-202ENST00000395205 IFIH1Q9BYX4 1025 aaKnown RBP10.62□□□□□ -0.71
BBS4-202ENST00000395205 CNTN3Q9P232 1028 aa10.62□□□□□ -0.71
BBS4-202ENST00000395205 AGAP1Q9UPQ3 857 aa10.62□□□□□ -0.71
BBS4-202ENST00000395205 ATP11BQ9Y2G3 1177 aa10.62□□□□□ -0.71
BBS4-202ENST00000395205 PPP2R2CQ9Y2T4 447 aa10.62□□□□□ -0.71
BBS4-202ENST00000395205 NUB1Q9Y5A7 615 aa10.62□□□□□ -0.71
BBS4-202ENST00000395205 SMIM28A0A1B0GU29 152 aa10.62□□□□□ -0.71
BBS4-202ENST00000395205 USP27XA6NNY8 438 aa10.62□□□□□ -0.71
BBS4-202ENST00000395205 CCP110O43303 1012 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms