RNA–Protein interactions for RNA: ENST00000392959.5

LCA5-202, Transcript of LCA5, lebercilin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LCA5, Length 4,719 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCA5-202ENST00000392959 ZC2HC1CQ53FD0 456 aaPredicted RBP13.81□□□□□ -0.2
LCA5-202ENST00000392959 SYCP2LQ5T4T6 812 aa13.81□□□□□ -0.2
LCA5-202ENST00000392959 DDIASQ8IXT1 998 aa13.81□□□□□ -0.2
LCA5-202ENST00000392959 DACH2Q96NX9 599 aa13.81□□□□□ -0.2
LCA5-202ENST00000392959 KCNK16Q96T55 309 aa13.81□□□□□ -0.2
LCA5-202ENST00000392959 PDHBP11177 359 aa13.81□□□□□ -0.2
LCA5-202ENST00000392959 RASA1P20936 1047 aa13.81□□□□□ -0.2
LCA5-202ENST00000392959 HSD17B3P37058 310 aa13.81□□□□□ -0.2
LCA5-202ENST00000392959 SERPINB9P50453 376 aa13.81□□□□□ -0.2
LCA5-202ENST00000392959 FXR2P51116 673 aaKnown RBP eCLIP13.81□□□□□ -0.2
LCA5-202ENST00000392959 NCOA4Q13772 614 aa13.81□□□□□ -0.2
LCA5-202ENST00000392959 LRRC36Q1X8D7 754 aa13.81□□□□□ -0.2
LCA5-202ENST00000392959 MAP3K14Q99558 947 aa13.81□□□□□ -0.2
LCA5-202ENST00000392959 SLC40A1Q9NP59 571 aa13.81□□□□□ -0.2
LCA5-202ENST00000392959 NCOA3Q9Y6Q9 1424 aa13.81□□□□□ -0.2
LCA5-202ENST00000392959 ZNF189O75820 626 aaPredicted RBP13.81□□□□□ -0.2
LCA5-202ENST00000392959 MOCS2O96007 188 aaPredicted RBP13.81□□□□□ -0.2
LCA5-202ENST00000392959 HADHAP40939 763 aa13.81□□□□□ -0.2
LCA5-202ENST00000392959 STAT5BP51692 787 aa13.81□□□□□ -0.2
LCA5-202ENST00000392959 HDAC4P56524 1084 aa13.81□□□□□ -0.2
LCA5-202ENST00000392959 RBM43Q6ZSC3 357 aaKnown RBP13.81□□□□□ -0.2
LCA5-202ENST00000392959 EP400NLQ6ZTU2 488 aa13.81□□□□□ -0.2
LCA5-202ENST00000392959 LMCD1Q9NZU5 365 aa13.81□□□□□ -0.2
LCA5-202ENST00000392959 UBA6A0AVT1 1052 aaPredicted RBP13.8□□□□□ -0.2
LCA5-202ENST00000392959 PLEKP08567 350 aaPredicted RBP13.8□□□□□ -0.2
LCA5-202ENST00000392959 ITGA8P53708 1063 aa13.8□□□□□ -0.2
LCA5-202ENST00000392959 TROAPQ12815 778 aa13.8□□□□□ -0.2
LCA5-202ENST00000392959 C3orf62Q6ZUJ4 267 aa13.8□□□□□ -0.2
LCA5-202ENST00000392959 TEX2Q8IWB9 1127 aa13.8□□□□□ -0.2
LCA5-202ENST00000392959 SP8Q8IXZ3 490 aa13.8□□□□□ -0.2
LCA5-202ENST00000392959 RIBC1Q8N443 379 aaPredicted RBP13.8□□□□□ -0.2
LCA5-202ENST00000392959 DNAJC9Q8WXX5 260 aa13.8□□□□□ -0.2
LCA5-202ENST00000392959 TNIP3Q96KP6 325 aa13.8□□□□□ -0.2
LCA5-202ENST00000392959 SH3GL3Q99963 347 aa13.8□□□□□ -0.2
LCA5-202ENST00000392959 THTPAQ9BU02 230 aa13.8□□□□□ -0.2
LCA5-202ENST00000392959 NYAP2Q9P242 653 aa13.8□□□□□ -0.2
LCA5-202ENST00000392959 XPO7Q9UIA9 1087 aaKnown RBP13.8□□□□□ -0.2
LCA5-202ENST00000392959 CHMP2BQ9UQN3 213 aa13.8□□□□□ -0.2
LCA5-202ENST00000392959 A0A087X0T9 212 aa13.8□□□□□ -0.2
LCA5-202ENST00000392959 B2RBV5 119 aa13.8□□□□□ -0.2
LCA5-202ENST00000392959 MAN1A2O60476 641 aa13.8□□□□□ -0.2
LCA5-202ENST00000392959 PRKCBP05771 671 aa13.8□□□□□ -0.2
LCA5-202ENST00000392959 FAM228BP0C875 321 aa13.8□□□□□ -0.2
LCA5-202ENST00000392959 RECQLP46063 649 aaPredicted RBP13.8□□□□□ -0.2
LCA5-202ENST00000392959 ZNF560Q96MR9 790 aa13.8□□□□□ -0.2
LCA5-202ENST00000392959 MCEEQ96PE7 176 aa13.8□□□□□ -0.2
LCA5-202ENST00000392959 KLF6Q99612 283 aaPredicted RBP13.8□□□□□ -0.2
LCA5-202ENST00000392959 EGFL8Q99944 293 aa13.8□□□□□ -0.2
LCA5-202ENST00000392959 NAGPAQ9UK23 515 aa13.8□□□□□ -0.2
LCA5-202ENST00000392959 AURKCQ9UQB9 309 aa13.8□□□□□ -0.2
LCA5-202ENST00000392959 SPAG6O75602 509 aa13.8□□□□□ -0.2
LCA5-202ENST00000392959 KCNA2P16389 499 aa13.8□□□□□ -0.2
LCA5-202ENST00000392959 HSD17B4P51659 736 aa13.8□□□□□ -0.2
LCA5-202ENST00000392959 KCNA1Q09470 495 aa13.8□□□□□ -0.2
LCA5-202ENST00000392959 PTK7Q13308 1070 aa13.8□□□□□ -0.2
LCA5-202ENST00000392959 NFIXQ14938 502 aa13.8□□□□□ -0.2
LCA5-202ENST00000392959 SPATA33Q96N06 139 aa13.8□□□□□ -0.2
LCA5-202ENST00000392959 AGAP3Q96P47 875 aa13.8□□□□□ -0.2
LCA5-202ENST00000392959 SPON2Q9BUD6 331 aa13.8□□□□□ -0.2
LCA5-202ENST00000392959 SP110Q9HB58 689 aa13.8□□□□□ -0.2
LCA5-202ENST00000392959 MTO1Q9Y2Z2 717 aaKnown RBP13.8□□□□□ -0.2
LCA5-202ENST00000392959 ALKQ9UM73 1620 aa13.8□□□□□ -0.2
LCA5-202ENST00000392959 EIF3DO15371 548 aaKnown RBP eCLIP13.79□□□□□ -0.2
LCA5-202ENST00000392959 RBP3P10745 1247 aa13.79□□□□□ -0.2
LCA5-202ENST00000392959 KCNB2Q92953 911 aa13.79□□□□□ -0.2
LCA5-202ENST00000392959 DNAJC7Q99615 494 aa13.79□□□□□ -0.2
LCA5-202ENST00000392959 EPAS1Q99814 870 aa13.79□□□□□ -0.2
LCA5-202ENST00000392959 FUCA2Q9BTY2 467 aa13.79□□□□□ -0.2
LCA5-202ENST00000392959 ARHGAP26Q9UNA1 814 aa13.79□□□□□ -0.2
LCA5-202ENST00000392959 P4HA2O15460 535 aa13.79□□□□□ -0.2
LCA5-202ENST00000392959 MYL3P08590 195 aa13.79□□□□□ -0.2
LCA5-202ENST00000392959 HNRNPH1P31943 449 aaKnown RBP13.79□□□□□ -0.2
LCA5-202ENST00000392959 CDK17Q00537 523 aa13.79□□□□□ -0.2
LCA5-202ENST00000392959 STILQ15468 1287 aa13.79□□□□□ -0.2
LCA5-202ENST00000392959 KDM7AQ6ZMT4 941 aa13.79□□□□□ -0.2
LCA5-202ENST00000392959 ZNF34Q8IZ26 560 aa13.79□□□□□ -0.2
LCA5-202ENST00000392959 MDM1Q8TC05 714 aa13.79□□□□□ -0.2
LCA5-202ENST00000392959 FAM118BQ9BPY3 351 aa13.79□□□□□ -0.2
LCA5-202ENST00000392959 PABPC3Q9H361 631 aaKnown RBP13.79□□□□□ -0.2
LCA5-202ENST00000392959 HPSEQ9Y251 543 aa13.79□□□□□ -0.2
LCA5-202ENST00000392959 hCG_2014768A0A024R1R8 64 aa13.79□□□□□ -0.2
LCA5-202ENST00000392959 SMAPO00193 183 aa13.79□□□□□ -0.2
LCA5-202ENST00000392959 NEMP1O14524 444 aa13.79□□□□□ -0.2
LCA5-202ENST00000392959 SNRPAP09012 282 aaKnown RBP13.79□□□□□ -0.2
LCA5-202ENST00000392959 ENO3P13929 434 aaPredicted RBP13.79□□□□□ -0.2
LCA5-202ENST00000392959 LBRQ14739 615 aaKnown RBP13.79□□□□□ -0.2
LCA5-202ENST00000392959 TRIP10Q15642 601 aa13.79□□□□□ -0.2
LCA5-202ENST00000392959 SLC30A9Q6PML9 568 aa13.79□□□□□ -0.2
LCA5-202ENST00000392959 PBXIP1Q96AQ6 731 aa13.79□□□□□ -0.2
LCA5-202ENST00000392959 ZMAT2Q96NC0 199 aaKnown RBP13.79□□□□□ -0.2
LCA5-202ENST00000392959 UNC45AQ9H3U1 944 aa13.79□□□□□ -0.2
LCA5-202ENST00000392959 EML4Q9HC35 981 aaKnown RBP13.79□□□□□ -0.2
LCA5-202ENST00000392959 AIPL1Q9NZN9 384 aa13.79□□□□□ -0.2
LCA5-202ENST00000392959 AGAP1Q9UPQ3 857 aa13.79□□□□□ -0.2
LCA5-202ENST00000392959 IGF2BP3O00425 579 aaKnown RBP eCLIP13.79□□□□□ -0.2
LCA5-202ENST00000392959 ATMINO43313 823 aaPredicted RBP13.79□□□□□ -0.2
LCA5-202ENST00000392959 LCP1P13796 627 aa13.79□□□□□ -0.2
LCA5-202ENST00000392959 KCNA3P22001 575 aa13.79□□□□□ -0.2
LCA5-202ENST00000392959 COILP38432 576 aaPredicted RBP13.79□□□□□ -0.2
LCA5-202ENST00000392959 KYAT1Q16773 422 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms