RNA–Protein interactions for RNA: ENST00000392557.8

BRF1-204, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 1 (best) BASIC

Gene BRF1, Length 3,579 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-204ENST00000392557 FAM167BQ9BTA0 163 aa11.56□□□□□ -0.56
BRF1-204ENST00000392557 CDC42EP4Q9H3Q1 356 aaKnown RBP11.56□□□□□ -0.56
BRF1-204ENST00000392557 ZDHHC18Q9NUE0 388 aa11.56□□□□□ -0.56
BRF1-204ENST00000392557 KCND2Q9NZV8 630 aa11.56□□□□□ -0.56
BRF1-204ENST00000392557 TRIM33Q9UPN9 1127 aa11.56□□□□□ -0.56
BRF1-204ENST00000392557 CSADQ9Y600 493 aa11.56□□□□□ -0.56
BRF1-204ENST00000392557 ATAD5Q96QE3 1844 aa11.56□□□□□ -0.56
BRF1-204ENST00000392557 DENND3A2RUS2 1198 aa11.56□□□□□ -0.56
BRF1-204ENST00000392557 POC1B-GALNT4F8VUJ3 575 aa11.56□□□□□ -0.56
BRF1-204ENST00000392557 NEFHP12036 1026 aa11.56□□□□□ -0.56
BRF1-204ENST00000392557 VAMP7P51809 220 aa11.56□□□□□ -0.56
BRF1-204ENST00000392557 JAK3P52333 1124 aa11.56□□□□□ -0.56
BRF1-204ENST00000392557 FSTL1Q12841 308 aa11.56□□□□□ -0.56
BRF1-204ENST00000392557 DMP1Q13316 513 aaPredicted RBP11.56□□□□□ -0.56
BRF1-204ENST00000392557 TMED2Q15363 201 aa11.56□□□□□ -0.56
BRF1-204ENST00000392557 CLUL1Q15846 466 aa11.56□□□□□ -0.56
BRF1-204ENST00000392557 SEPT7Q16181 437 aaKnown RBP11.56□□□□□ -0.56
BRF1-204ENST00000392557 ANO5Q75V66 913 aa11.56□□□□□ -0.56
BRF1-204ENST00000392557 CROCCP2Q86T23 111 aa11.56□□□□□ -0.56
BRF1-204ENST00000392557 FMNL3Q8IVF7 1028 aa11.56□□□□□ -0.56
BRF1-204ENST00000392557 ZC3H3Q8IXZ2 948 aaKnown RBP11.56□□□□□ -0.56
BRF1-204ENST00000392557 TAB3Q8N5C8 712 aaPredicted RBP11.56□□□□□ -0.56
BRF1-204ENST00000392557 DCPSQ96C86 337 aaKnown RBP11.56□□□□□ -0.56
BRF1-204ENST00000392557 PGM2Q96G03 612 aa11.56□□□□□ -0.56
BRF1-204ENST00000392557 LBHD1Q9BQE6 289 aaPredicted RBP11.56□□□□□ -0.56
BRF1-204ENST00000392557 MOV10L1Q9BXT6 1211 aaKnown RBP11.56□□□□□ -0.56
BRF1-204ENST00000392557 JPH1Q9HDC5 661 aaPredicted RBP11.56□□□□□ -0.56
BRF1-204ENST00000392557 KMT5AQ9NQR1 393 aa11.56□□□□□ -0.56
BRF1-204ENST00000392557 HSPBP1Q9NZL4 362 aa11.56□□□□□ -0.56
BRF1-204ENST00000392557 ANAPC7Q9UJX3 599 aa11.56□□□□□ -0.56
BRF1-204ENST00000392557 SPDYE16A6NNV3 312 aaPredicted RBP11.55□□□□□ -0.56
BRF1-204ENST00000392557 RARAP10276 462 aa11.55□□□□□ -0.56
BRF1-204ENST00000392557 HSPA6P17066 643 aa11.55□□□□□ -0.56
BRF1-204ENST00000392557 AUHQ13825 339 aaKnown RBP11.55□□□□□ -0.56
BRF1-204ENST00000392557 ZDHHC24Q6UX98 284 aa11.55□□□□□ -0.56
BRF1-204ENST00000392557 SLC47A2Q86VL8 602 aa11.55□□□□□ -0.56
BRF1-204ENST00000392557 SLC13A5Q86YT5 568 aaPredicted RBP11.55□□□□□ -0.56
BRF1-204ENST00000392557 FBXO41Q8TF61 875 aa11.55□□□□□ -0.56
BRF1-204ENST00000392557 ZNF668Q96K58 619 aaPredicted RBP11.55□□□□□ -0.56
BRF1-204ENST00000392557 CCDC77Q9BR77 488 aa11.55□□□□□ -0.56
BRF1-204ENST00000392557 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.55□□□□□ -0.562e-7■■■■□ 25.7
BRF1-204ENST00000392557 ANAPC5Q9UJX4 755 aa11.55□□□□□ -0.56
BRF1-204ENST00000392557 GTPBP10A4D1E9 387 aaKnown RBP11.55□□□□□ -0.56
BRF1-204ENST00000392557 C5orf60A6NFR6 353 aa11.55□□□□□ -0.56
BRF1-204ENST00000392557 SPAG7O75391 227 aa11.55□□□□□ -0.56
BRF1-204ENST00000392557 GAS8O95995 478 aa11.55□□□□□ -0.56
BRF1-204ENST00000392557 ATF2P15336 505 aa11.55□□□□□ -0.56
BRF1-204ENST00000392557 ATP5DP30049 168 aa11.55□□□□□ -0.56
BRF1-204ENST00000392557 MAPK4P31152 587 aa11.55□□□□□ -0.56
BRF1-204ENST00000392557 PPATQ06203 517 aa11.55□□□□□ -0.56
BRF1-204ENST00000392557 KAZNQ674X7 775 aa11.55□□□□□ -0.56
BRF1-204ENST00000392557 CATSPERGQ6ZRH7 1159 aa11.55□□□□□ -0.56
BRF1-204ENST00000392557 EXOC3L1Q86VI1 746 aa11.55□□□□□ -0.56
BRF1-204ENST00000392557 HOXC10Q9NYD6 342 aa11.55□□□□□ -0.56
BRF1-204ENST00000392557 CYP39A1Q9NYL5 469 aa11.55□□□□□ -0.56
BRF1-204ENST00000392557 PNMA3Q9UL41 463 aa11.55□□□□□ -0.56
BRF1-204ENST00000392557 A8MUI8 341 aa11.54□□□□□ -0.56
BRF1-204ENST00000392557 C19orf81C9J6K1 198 aa11.54□□□□□ -0.56
BRF1-204ENST00000392557 HNRNPDLO14979 420 aaKnown RBP11.54□□□□□ -0.56
BRF1-204ENST00000392557 ASAP2O43150 1006 aa11.54□□□□□ -0.56
BRF1-204ENST00000392557 DNAJC8O75937 253 aaPredicted RBP11.54□□□□□ -0.56
BRF1-204ENST00000392557 GH1P01241 217 aa11.54□□□□□ -0.56
BRF1-204ENST00000392557 PAEPP09466 180 aa11.54□□□□□ -0.56
BRF1-204ENST00000392557 NUDT17P0C025 328 aa11.54□□□□□ -0.56
BRF1-204ENST00000392557 HARSP12081 509 aaKnown RBP11.54□□□□□ -0.56
BRF1-204ENST00000392557 RARGP13631 454 aa11.54□□□□□ -0.56
BRF1-204ENST00000392557 KRT15P19012 456 aa11.54□□□□□ -0.56
BRF1-204ENST00000392557 GCKP35557 465 aa11.54□□□□□ -0.56
BRF1-204ENST00000392557 PLCB3Q01970 1234 aa11.54□□□□□ -0.56
BRF1-204ENST00000392557 GNPTABQ3T906 1256 aa11.54□□□□□ -0.56
BRF1-204ENST00000392557 DAB2IPQ5VWQ8 1189 aa11.54□□□□□ -0.56
BRF1-204ENST00000392557 ZNF449Q6P9G9 518 aa11.54□□□□□ -0.56
BRF1-204ENST00000392557 NIPA1Q7RTP0 329 aa11.54□□□□□ -0.56
BRF1-204ENST00000392557 CBWD2Q8IUF1 395 aa11.54□□□□□ -0.56
BRF1-204ENST00000392557 CCDC60Q8IWA6 550 aaPredicted RBP11.54□□□□□ -0.56
BRF1-204ENST00000392557 XXYLT1Q8NBI6 393 aa11.54□□□□□ -0.56
BRF1-204ENST00000392557 ATXN2LQ8WWM7 1075 aaKnown RBP11.54□□□□□ -0.56
BRF1-204ENST00000392557 POMGNT1Q8WZA1 660 aa11.54□□□□□ -0.56
BRF1-204ENST00000392557 ZNF317Q96PQ6 595 aaPredicted RBP11.54□□□□□ -0.56
BRF1-204ENST00000392557 TMEM206Q9H813 350 aa11.54□□□□□ -0.56
BRF1-204ENST00000392557 ETNK1Q9HBU6 452 aa11.54□□□□□ -0.56
BRF1-204ENST00000392557 SLC9A2Q9UBY0 812 aa11.54□□□□□ -0.56
BRF1-204ENST00000392557 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.54□□□□□ -0.56
BRF1-204ENST00000392557 AGAP1Q9UPQ3 857 aa11.54□□□□□ -0.56
BRF1-204ENST00000392557 POLR2AP24928 1970 aaKnown RBP11.54□□□□□ -0.56
BRF1-204ENST00000392557 FER1L6Q2WGJ9 1857 aa11.54□□□□□ -0.56
BRF1-204ENST00000392557 ZNF862O60290 1169 aa11.54□□□□□ -0.56
BRF1-204ENST00000392557 MUTP22033 750 aa11.54□□□□□ -0.56
BRF1-204ENST00000392557 SFNP31947 248 aa11.54□□□□□ -0.56
BRF1-204ENST00000392557 ALDH5A1P51649 535 aaPredicted RBP11.54□□□□□ -0.56
BRF1-204ENST00000392557 POU5F1Q01860 360 aaKnown RBP11.54□□□□□ -0.56
BRF1-204ENST00000392557 PRKCEQ02156 737 aa11.54□□□□□ -0.56
BRF1-204ENST00000392557 SETDB1Q15047 1291 aa11.54□□□□□ -0.56
BRF1-204ENST00000392557 CNGA2Q16280 664 aa11.54□□□□□ -0.56
BRF1-204ENST00000392557 SPATA21Q7Z572 469 aa11.54□□□□□ -0.56
BRF1-204ENST00000392557 GPC2Q8N158 579 aa11.54□□□□□ -0.56
BRF1-204ENST00000392557 KCTD17Q8N5Z5 321 aa11.54□□□□□ -0.56
BRF1-204ENST00000392557 AGAP11Q8TF27 550 aa11.54□□□□□ -0.56
BRF1-204ENST00000392557 PITPNM3Q9BZ71 974 aa11.54□□□□□ -0.56
BRF1-204ENST00000392557 TRIM7Q9C029 511 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms