RNA–Protein interactions for RNA: ENST00000388996.9

KCNQ3-201, Transcript of potassium voltage-gated channel subfamily Q member 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene KCNQ3, Length 11,510 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNQ3-201ENST00000388996 ECT2Q9H8V3 914 aa12.95□□□□□ -0.34
KCNQ3-201ENST00000388996 METTL16Q86W50 562 aaKnown RBP12.95□□□□□ -0.34
KCNQ3-201ENST00000388996 NSUN4Q96CB9 384 aaKnown RBP12.95□□□□□ -0.34
KCNQ3-201ENST00000388996 NAF1Q96HR8 494 aaKnown RBP12.95□□□□□ -0.34
KCNQ3-201ENST00000388996 MAD2L2Q9UI95 211 aa12.95□□□□□ -0.34
KCNQ3-201ENST00000388996 C5orf58C9J3I9 102 aa12.95□□□□□ -0.34
KCNQ3-201ENST00000388996 ICA1LQ8NDH6 482 aa12.95□□□□□ -0.34
KCNQ3-201ENST00000388996 USP31Q70CQ4 1352 aa12.95□□□□□ -0.34
KCNQ3-201ENST00000388996 CACNA1GO43497 2377 aa12.95□□□□□ -0.34
KCNQ3-201ENST00000388996 C3orf70A6NLC5 250 aaPredicted RBP12.95□□□□□ -0.34
KCNQ3-201ENST00000388996 PRKCEQ02156 737 aa12.95□□□□□ -0.34
KCNQ3-201ENST00000388996 KRT35Q92764 455 aa12.95□□□□□ -0.34
KCNQ3-201ENST00000388996 ZNF512Q96ME7 567 aaPredicted RBP12.95□□□□□ -0.34
KCNQ3-201ENST00000388996 YY1AP1Q9H869 796 aa12.95□□□□□ -0.34
KCNQ3-201ENST00000388996 CNPY4Q8N129 248 aa12.95□□□□□ -0.34
KCNQ3-201ENST00000388996 SRBD1Q8N5C6 995 aaKnown RBP12.95□□□□□ -0.34
KCNQ3-201ENST00000388996 GJD4Q96KN9 370 aaPredicted RBP12.95□□□□□ -0.34
KCNQ3-201ENST00000388996 WDR24Q96S15 920 aa12.95□□□□□ -0.34
KCNQ3-201ENST00000388996 CCSER1Q9C0I3 900 aa12.95□□□□□ -0.34
KCNQ3-201ENST00000388996 FBXL5Q9UKA1 691 aa12.95□□□□□ -0.34
KCNQ3-201ENST00000388996 AARSP49588 968 aaKnown RBP eCLIP12.95□□□□□ -0.34
KCNQ3-201ENST00000388996 LSM7Q9UK45 103 aaKnown RBP12.95□□□□□ -0.34
KCNQ3-201ENST00000388996 RNF103-CHMP3A0A140T963 221 aa12.95□□□□□ -0.34
KCNQ3-201ENST00000388996 CYP26A1O43174 497 aa12.95□□□□□ -0.34
KCNQ3-201ENST00000388996 MAP3K10Q02779 954 aa12.95□□□□□ -0.34
KCNQ3-201ENST00000388996 SNX17Q15036 470 aa12.95□□□□□ -0.34
KCNQ3-201ENST00000388996 ZNF280CQ8ND82 737 aa12.95□□□□□ -0.34
KCNQ3-201ENST00000388996 SLC26A7Q8TE54 656 aa12.95□□□□□ -0.34
KCNQ3-201ENST00000388996 IQSEC2Q5JU85 1478 aa12.95□□□□□ -0.34
KCNQ3-201ENST00000388996 NR1H4Q96RI1 486 aaPredicted RBP12.95□□□□□ -0.34
KCNQ3-201ENST00000388996 CHCHD3Q9NX63 227 aaKnown RBP12.95□□□□□ -0.34
KCNQ3-201ENST00000388996 UBA6A0AVT1 1052 aaPredicted RBP12.94□□□□□ -0.34
KCNQ3-201ENST00000388996 RFC5P40937 340 aa12.94□□□□□ -0.34
KCNQ3-201ENST00000388996 AGPAT1Q99943 283 aa12.94□□□□□ -0.34
KCNQ3-201ENST00000388996 MRFAP1Q9Y605 127 aa12.94□□□□□ -0.34
KCNQ3-201ENST00000388996 DIP2BQ9P265 1576 aa12.94□□□□□ -0.34
KCNQ3-201ENST00000388996 AP3B1O00203 1094 aa12.94□□□□□ -0.34
KCNQ3-201ENST00000388996 MAN1A2O60476 641 aa12.94□□□□□ -0.34
KCNQ3-201ENST00000388996 HLA-DPA1P20036 260 aa12.94□□□□□ -0.34
KCNQ3-201ENST00000388996 CHRNA5P30532 468 aa12.94□□□□□ -0.34
KCNQ3-201ENST00000388996 NLRP14Q86W24 1093 aa12.94□□□□□ -0.34
KCNQ3-201ENST00000388996 C19orf81C9J6K1 198 aa12.94□□□□□ -0.34
KCNQ3-201ENST00000388996 ZSCAN9O15535 394 aaPredicted RBP12.94□□□□□ -0.34
KCNQ3-201ENST00000388996 NMT1P30419 496 aaKnown RBP12.94□□□□□ -0.34
KCNQ3-201ENST00000388996 GUCY1A2P33402 732 aa12.94□□□□□ -0.34
KCNQ3-201ENST00000388996 STILQ15468 1287 aa12.94□□□□□ -0.34
KCNQ3-201ENST00000388996 TSGA10IPQ3SY00 556 aa12.94□□□□□ -0.34
KCNQ3-201ENST00000388996 CRAMP1Q96RY5 1269 aa12.94□□□□□ -0.34
KCNQ3-201ENST00000388996 SVILO95425 2214 aa12.94□□□□□ -0.34
KCNQ3-201ENST00000388996 NDUFB10O96000 172 aa12.94□□□□□ -0.34
KCNQ3-201ENST00000388996 CYBBP04839 570 aa12.94□□□□□ -0.34
KCNQ3-201ENST00000388996 KCNA4P22459 653 aa12.94□□□□□ -0.34
KCNQ3-201ENST00000388996 ACTR2P61160 394 aa12.94□□□□□ -0.34
KCNQ3-201ENST00000388996 PDK1Q15118 436 aa12.94□□□□□ -0.34
KCNQ3-201ENST00000388996 UGP2Q16851 508 aa12.94□□□□□ -0.34
KCNQ3-201ENST00000388996 TRIML2Q8N7C3 387 aa12.94□□□□□ -0.34
KCNQ3-201ENST00000388996 TBC1D16Q8TBP0 767 aa12.94□□□□□ -0.34
KCNQ3-201ENST00000388996 C7orf25Q9BPX7 421 aa12.94□□□□□ -0.34
KCNQ3-201ENST00000388996 ADGRG1Q9Y653 693 aa12.94□□□□□ -0.34
KCNQ3-201ENST00000388996 ANKRD26Q9UPS8 1709 aa12.94□□□□□ -0.34
KCNQ3-201ENST00000388996 TCP11X1B4DZS4 312 aa12.94□□□□□ -0.34
KCNQ3-201ENST00000388996 IL10P22301 178 aa12.94□□□□□ -0.34
KCNQ3-201ENST00000388996 STOML1Q9UBI4 398 aa12.94□□□□□ -0.34
KCNQ3-201ENST00000388996 CHGBP05060 677 aa12.94□□□□□ -0.34
KCNQ3-201ENST00000388996 ARHGEF38Q9NXL2 777 aa12.94□□□□□ -0.34
KCNQ3-201ENST00000388996 ARHGAP10A1A4S6 786 aa12.94□□□□□ -0.34
KCNQ3-201ENST00000388996 LRRC8EQ6NSJ5 796 aa12.94□□□□□ -0.34
KCNQ3-201ENST00000388996 SHC4Q6S5L8 630 aa12.94□□□□□ -0.34
KCNQ3-201ENST00000388996 UVRAGQ9P2Y5 699 aa12.94□□□□□ -0.34
KCNQ3-201ENST00000388996 CNOT7Q9UIV1 285 aaKnown RBP12.94□□□□□ -0.34
KCNQ3-201ENST00000388996 CLCA2Q9UQC9 943 aa12.94□□□□□ -0.34
KCNQ3-201ENST00000388996 C1orf167Q5SNV9 1468 aa12.94□□□□□ -0.34
KCNQ3-201ENST00000388996 GTPBP10A4D1E9 387 aaKnown RBP12.94□□□□□ -0.34
KCNQ3-201ENST00000388996 GMNCA6NCL1 334 aa12.94□□□□□ -0.34
KCNQ3-201ENST00000388996 RGL1Q9NZL6 768 aa12.94□□□□□ -0.34
KCNQ3-201ENST00000388996 EHD2Q9NZN4 543 aa12.94□□□□□ -0.34
KCNQ3-201ENST00000388996 BAZ2AQ9UIF9 1905 aaKnown RBP12.94□□□□□ -0.34
KCNQ3-201ENST00000388996 SUPT3HB4E1H0 165 aa12.93□□□□□ -0.34
KCNQ3-201ENST00000388996 TEX33O43247 280 aa12.93□□□□□ -0.34
KCNQ3-201ENST00000388996 SUPT3HO75486 399 aa12.93□□□□□ -0.34
KCNQ3-201ENST00000388996 ARIH2O95376 493 aa12.93□□□□□ -0.34
KCNQ3-201ENST00000388996 ATL2Q8NHH9 583 aa12.93□□□□□ -0.34
KCNQ3-201ENST00000388996 CLMNQ96JQ2 1002 aa12.93□□□□□ -0.34
KCNQ3-201ENST00000388996 KATNAL1Q9BW62 490 aa12.93□□□□□ -0.34
KCNQ3-201ENST00000388996 WDR35Q9P2L0 1181 aa12.93□□□□□ -0.34
KCNQ3-201ENST00000388996 SNX5Q9Y5X3 404 aa12.93□□□□□ -0.34
KCNQ3-201ENST00000388996 SPTBN2O15020 2390 aa12.93□□□□□ -0.34
KCNQ3-201ENST00000388996 WASHC5Q12768 1159 aa12.93□□□□□ -0.34
KCNQ3-201ENST00000388996 TRIM28Q13263 835 aaKnown RBP12.93□□□□□ -0.34
KCNQ3-201ENST00000388996 NIPSNAP3AQ9UFN0 247 aaPredicted RBP12.93□□□□□ -0.34
KCNQ3-201ENST00000388996 ADAM21Q9UKJ8 722 aa12.93□□□□□ -0.34
KCNQ3-201ENST00000388996 ALDH1A1P00352 501 aa12.93□□□□□ -0.34
KCNQ3-201ENST00000388996 GH1P01241 217 aa12.93□□□□□ -0.34
KCNQ3-201ENST00000388996 ATP1A1P05023 1023 aaKnown RBP12.93□□□□□ -0.34
KCNQ3-201ENST00000388996 ARFIP2P53365 341 aa12.93□□□□□ -0.34
KCNQ3-201ENST00000388996 ABCE1P61221 599 aaKnown RBP12.93□□□□□ -0.34
KCNQ3-201ENST00000388996 APRTP07741 180 aa12.93□□□□□ -0.34
KCNQ3-201ENST00000388996 SCP2P22307 547 aa12.93□□□□□ -0.34
KCNQ3-201ENST00000388996 VCPP55072 806 aaKnown RBP12.93□□□□□ -0.34
KCNQ3-201ENST00000388996 OCA2Q04671 838 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms