RNA–Protein interactions for RNA: ENST00000376636.7

VPS13A-205, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13A, Length 11,145 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-205ENST00000376636 KCTD1Q719H9 257 aa12.19□□□□□ -0.46
VPS13A-205ENST00000376636 SUCLG2Q96I99 432 aa12.19□□□□□ -0.46
VPS13A-205ENST00000376636 ELMO2Q96JJ3 720 aa12.19□□□□□ -0.46
VPS13A-205ENST00000376636 LATS2Q9NRM7 1088 aa12.19□□□□□ -0.46
VPS13A-205ENST00000376636 PNMA3Q9UL41 463 aa12.19□□□□□ -0.46
VPS13A-205ENST00000376636 MYH9P35579 1960 aaKnown RBP12.19□□□□□ -0.46
VPS13A-205ENST00000376636 PRR23AA6NEV1 266 aa12.19□□□□□ -0.46
VPS13A-205ENST00000376636 EIF3HO15372 352 aaKnown RBP eCLIP12.19□□□□□ -0.461e-6■■■■□ 24.5
VPS13A-205ENST00000376636 HNMTP50135 292 aa12.19□□□□□ -0.46
VPS13A-205ENST00000376636 ACTR2P61160 394 aa12.19□□□□□ -0.46
VPS13A-205ENST00000376636 RPS6P62753 249 aaKnown RBP12.19□□□□□ -0.46
VPS13A-205ENST00000376636 PUDPQ08623 228 aa12.19□□□□□ -0.46
VPS13A-205ENST00000376636 CNTN1Q12860 1018 aa12.19□□□□□ -0.46
VPS13A-205ENST00000376636 DGKHQ86XP1 1220 aa12.19□□□□□ -0.46
VPS13A-205ENST00000376636 ATP6V1C1P21283 382 aa12.19□□□□□ -0.46
VPS13A-205ENST00000376636 SOAT1P35610 550 aa12.19□□□□□ -0.46
VPS13A-205ENST00000376636 COPAP53621 1224 aa12.19□□□□□ -0.46
VPS13A-205ENST00000376636 MTERF2Q49AM1 385 aa12.19□□□□□ -0.46
VPS13A-205ENST00000376636 IZUMO3Q5VZ72 239 aa12.19□□□□□ -0.46
VPS13A-205ENST00000376636 XXYLT1Q8NBI6 393 aa12.19□□□□□ -0.46
VPS13A-205ENST00000376636 PACSIN1Q9BY11 444 aa12.19□□□□□ -0.46
VPS13A-205ENST00000376636 ABCB1P08183 1280 aaPredicted RBP12.19□□□□□ -0.46
VPS13A-205ENST00000376636 TTC39BQ5VTQ0 682 aaPredicted RBP12.19□□□□□ -0.46
VPS13A-205ENST00000376636 DENND3A2RUS2 1198 aa12.19□□□□□ -0.46
VPS13A-205ENST00000376636 ITGA1P56199 1179 aa12.19□□□□□ -0.46
VPS13A-205ENST00000376636 DCTN2Q13561 401 aaKnown RBP12.19□□□□□ -0.46
VPS13A-205ENST00000376636 COBLL1Q53SF7 1204 aa12.19□□□□□ -0.46
VPS13A-205ENST00000376636 ALDH6A1Q02252 535 aaKnown RBP12.19□□□□□ -0.46
VPS13A-205ENST00000376636 NME3Q13232 169 aa12.19□□□□□ -0.46
VPS13A-205ENST00000376636 RC3H1Q5TC82 1133 aaKnown RBP12.19□□□□□ -0.46
VPS13A-205ENST00000376636 CYP4Z1Q86W10 505 aa12.19□□□□□ -0.46
VPS13A-205ENST00000376636 ABCA10Q8WWZ4 1543 aa12.19□□□□□ -0.46
VPS13A-205ENST00000376636 LGALS16A8MUM7 142 aa12.19□□□□□ -0.46
VPS13A-205ENST00000376636 ALDH1A2O94788 518 aa12.19□□□□□ -0.46
VPS13A-205ENST00000376636 RALAP11233 206 aa12.19□□□□□ -0.46
VPS13A-205ENST00000376636 FCGR1AP12314 374 aa12.19□□□□□ -0.46
VPS13A-205ENST00000376636 ATP6V1B1P15313 513 aa12.19□□□□□ -0.46
VPS13A-205ENST00000376636 KIZQ2M2Z5 673 aa12.19□□□□□ -0.46
VPS13A-205ENST00000376636 C12orf60Q5U649 245 aa12.19□□□□□ -0.46
VPS13A-205ENST00000376636 NFRKBQ6P4R8 1299 aa12.19□□□□□ -0.46
VPS13A-205ENST00000376636 ARHGEF38Q9NXL2 777 aa12.19□□□□□ -0.46
VPS13A-205ENST00000376636 TOPBP1Q92547 1522 aa12.18□□□□□ -0.46
VPS13A-205ENST00000376636 MAPK6Q16659 721 aa12.18□□□□□ -0.46
VPS13A-205ENST00000376636 LRRC24Q50LG9 513 aa12.18□□□□□ -0.46
VPS13A-205ENST00000376636 LRIG3Q6UXM1 1119 aa12.18□□□□□ -0.46
VPS13A-205ENST00000376636 UNC13DQ70J99 1090 aa12.18□□□□□ -0.46
VPS13A-205ENST00000376636 ZNF786Q8N393 782 aa12.18□□□□□ -0.46
VPS13A-205ENST00000376636 YIPF2Q9BWQ6 316 aa12.18□□□□□ -0.46
VPS13A-205ENST00000376636 MOV10L1Q9BXT6 1211 aaKnown RBP12.18□□□□□ -0.46
VPS13A-205ENST00000376636 ING3Q9NXR8 418 aa12.18□□□□□ -0.46
VPS13A-205ENST00000376636 PRIM2P49643 509 aa12.18□□□□□ -0.46
VPS13A-205ENST00000376636 GPC3P51654 580 aa12.18□□□□□ -0.46
VPS13A-205ENST00000376636 GYS2P54840 703 aa12.18□□□□□ -0.46
VPS13A-205ENST00000376636 LRRC14Q15048 493 aa12.18□□□□□ -0.46
VPS13A-205ENST00000376636 SDE2Q6IQ49 451 aa12.18□□□□□ -0.46
VPS13A-205ENST00000376636 UBXN6Q9BZV1 441 aa12.18□□□□□ -0.46
VPS13A-205ENST00000376636 HMG20AQ9NP66 347 aa12.18□□□□□ -0.46
VPS13A-205ENST00000376636 DNAJC12Q9UKB3 198 aa12.18□□□□□ -0.46
VPS13A-205ENST00000376636 SPACA6W5XKT8 324 aa12.18□□□□□ -0.46
VPS13A-205ENST00000376636 AATKQ6ZMQ8 1374 aa12.18□□□□□ -0.46
VPS13A-205ENST00000376636 C3orf70A6NLC5 250 aaPredicted RBP12.18□□□□□ -0.46
VPS13A-205ENST00000376636 NDUFS3O75489 264 aa12.18□□□□□ -0.46
VPS13A-205ENST00000376636 TBC1D10BQ4KMP7 808 aaPredicted RBP12.18□□□□□ -0.46
VPS13A-205ENST00000376636 SCN4BQ8IWT1 228 aa12.18□□□□□ -0.46
VPS13A-205ENST00000376636 SHCBP1Q8NEM2 672 aa12.18□□□□□ -0.46
VPS13A-205ENST00000376636 ENKURQ8TC29 256 aa12.18□□□□□ -0.46
VPS13A-205ENST00000376636 KCNN4O15554 427 aa12.18□□□□□ -0.46
VPS13A-205ENST00000376636 GFPT1Q06210 699 aaPredicted RBP12.18□□□□□ -0.46
VPS13A-205ENST00000376636 SNX31Q8N9S9 440 aa12.18□□□□□ -0.46
VPS13A-205ENST00000376636 PAGE5Q96GU1 130 aa12.18□□□□□ -0.46
VPS13A-205ENST00000376636 DHX36Q9H2U1 1008 aaKnown RBP12.18□□□□□ -0.46
VPS13A-205ENST00000376636 EIF2B2P49770 351 aaKnown RBP12.18□□□□□ -0.46
VPS13A-205ENST00000376636 WDR36Q8NI36 951 aaKnown RBP12.18□□□□□ -0.46
VPS13A-205ENST00000376636 CCT8L2Q96SF2 557 aa12.18□□□□□ -0.46
VPS13A-205ENST00000376636 PPP1R37O75864 691 aa12.18□□□□□ -0.46
VPS13A-205ENST00000376636 FGFR4P22455 802 aa12.18□□□□□ -0.46
VPS13A-205ENST00000376636 CACHD1Q5VU97 1274 aa12.18□□□□□ -0.46
VPS13A-205ENST00000376636 RSBN1Q5VWQ0 802 aaPredicted RBP12.18□□□□□ -0.46
VPS13A-205ENST00000376636 RNASE11Q8TAA1 199 aaKnown RBP12.18□□□□□ -0.46
VPS13A-205ENST00000376636 RNFT2Q96EX2 444 aa12.18□□□□□ -0.46
VPS13A-205ENST00000376636 CD274Q9NZQ7 290 aa12.18□□□□□ -0.46
VPS13A-205ENST00000376636 TCP10L2B9ZVM9 353 aa12.18□□□□□ -0.46
VPS13A-205ENST00000376636 AIM2O14862 343 aa12.18□□□□□ -0.46
VPS13A-205ENST00000376636 ZNF862O60290 1169 aa12.18□□□□□ -0.46
VPS13A-205ENST00000376636 SYCP2LQ5T4T6 812 aa12.18□□□□□ -0.46
VPS13A-205ENST00000376636 HEATR4Q86WZ0 1026 aa12.18□□□□□ -0.46
VPS13A-205ENST00000376636 KLHL3Q9UH77 587 aa12.18□□□□□ -0.46
VPS13A-205ENST00000376636 SMAPO00193 183 aa12.18□□□□□ -0.46
VPS13A-205ENST00000376636 MED26O95402 600 aa12.18□□□□□ -0.46
VPS13A-205ENST00000376636 NR3C1P04150 777 aa12.18□□□□□ -0.46
VPS13A-205ENST00000376636 APRTP07741 180 aa12.18□□□□□ -0.46
VPS13A-205ENST00000376636 ORC2Q13416 577 aaPredicted RBP12.18□□□□□ -0.46
VPS13A-205ENST00000376636 ZNF568Q3ZCX4 644 aa12.18□□□□□ -0.46
VPS13A-205ENST00000376636 RESP18Q5W5W9 173 aa12.18□□□□□ -0.46
VPS13A-205ENST00000376636 UGT3A1Q6NUS8 523 aa12.18□□□□□ -0.46
VPS13A-205ENST00000376636 CYP4Z2PQ8N1L4 340 aa12.18□□□□□ -0.46
VPS13A-205ENST00000376636 MAP3K20Q9NYL2 800 aaKnown RBP12.18□□□□□ -0.46
VPS13A-205ENST00000376636 A0A1W2PP64 1363 aa12.18□□□□□ -0.46
VPS13A-205ENST00000376636 PEX5P50542 639 aa12.17□□□□□ -0.46
VPS13A-205ENST00000376636 PEG10Q86TG7 708 aaKnown RBP12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms