RNA–Protein interactions for RNA: ENST00000376237.8

HLA-C-202, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,538 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-202ENST00000376237 PON1P27169 355 aa24.72■■□□□ 1.55
HLA-C-202ENST00000376237 PIK3CAP42336 1068 aa24.72■■□□□ 1.55
HLA-C-202ENST00000376237 KCNJ6P48051 423 aa24.72■■□□□ 1.55
HLA-C-202ENST00000376237 SCNN1GP51170 649 aa24.72■■□□□ 1.55
HLA-C-202ENST00000376237 WDR5P61964 334 aaKnown RBP24.72■■□□□ 1.55
HLA-C-202ENST00000376237 NCOA4Q13772 614 aa24.72■■□□□ 1.55
HLA-C-202ENST00000376237 NOMO2Q5JPE7 1267 aa24.72■■□□□ 1.55
HLA-C-202ENST00000376237 CLLU1OSQ5K130 101 aa24.72■■□□□ 1.55
HLA-C-202ENST00000376237 OTOP2Q7RTS6 562 aa24.72■■□□□ 1.55
HLA-C-202ENST00000376237 CCDC150Q8NCX0 1101 aa24.72■■□□□ 1.55
HLA-C-202ENST00000376237 HELQQ8TDG4 1101 aa24.72■■□□□ 1.55
HLA-C-202ENST00000376237 NUP58Q9BVL2 599 aa24.72■■□□□ 1.55
HLA-C-202ENST00000376237 PLCB1Q9NQ66 1216 aa24.72■■□□□ 1.55
HLA-C-202ENST00000376237 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP24.72■■□□□ 1.55
HLA-C-202ENST00000376237 HLA-DRAP01903 254 aa24.71■■□□□ 1.55
HLA-C-202ENST00000376237 FGFR1P11362 822 aa24.71■■□□□ 1.55
HLA-C-202ENST00000376237 RBP5P82980 135 aa24.71■■□□□ 1.55
HLA-C-202ENST00000376237 TMEM240Q5SV17 173 aa24.71■■□□□ 1.55
HLA-C-202ENST00000376237 LMO3Q8TAP4 145 aa24.71■■□□□ 1.55
HLA-C-202ENST00000376237 IMPG2Q9BZV3 1241 aa24.71■■□□□ 1.55
HLA-C-202ENST00000376237 RNF19AQ9NV58 838 aa24.71■■□□□ 1.55
HLA-C-202ENST00000376237 MIOSQ9NXC5 875 aa24.71■■□□□ 1.55
HLA-C-202ENST00000376237 INPP5FQ9Y2H2 1132 aa24.71■■□□□ 1.55
HLA-C-202ENST00000376237 DAAM1Q9Y4D1 1078 aa24.71■■□□□ 1.55
HLA-C-202ENST00000376237 VNN1O95497 513 aa24.71■■□□□ 1.55
HLA-C-202ENST00000376237 CST3P01034 146 aaPredicted RBP24.71■■□□□ 1.55
HLA-C-202ENST00000376237 SLC9A1P19634 815 aa24.71■■□□□ 1.55
HLA-C-202ENST00000376237 ATICP31939 592 aa24.71■■□□□ 1.55
HLA-C-202ENST00000376237 SGSM1Q2NKQ1 1148 aa24.71■■□□□ 1.55
HLA-C-202ENST00000376237 WDR44Q5JSH3 913 aa24.71■■□□□ 1.55
HLA-C-202ENST00000376237 TRIM65Q6PJ69 517 aa24.71■■□□□ 1.55
HLA-C-202ENST00000376237 DRC7Q8IY82 874 aa24.71■■□□□ 1.55
HLA-C-202ENST00000376237 TAF4BQ92750 862 aa24.71■■□□□ 1.55
HLA-C-202ENST00000376237 MRPL9Q9BYD2 267 aaKnown RBP24.71■■□□□ 1.55
HLA-C-202ENST00000376237 INTS2Q9H0H0 1204 aaKnown RBP24.71■■□□□ 1.55
HLA-C-202ENST00000376237 MTIF3Q9H2K0 278 aaKnown RBP24.71■■□□□ 1.55
HLA-C-202ENST00000376237 TTC3P53804 2025 aa24.7■■□□□ 1.55
HLA-C-202ENST00000376237 ANK1P16157 1881 aa24.7■■□□□ 1.54
HLA-C-202ENST00000376237 POMCP01189 267 aa24.7■■□□□ 1.54
HLA-C-202ENST00000376237 ITGB3P05106 788 aa24.7■■□□□ 1.54
HLA-C-202ENST00000376237 LRPAP1P30533 357 aa24.7■■□□□ 1.54
HLA-C-202ENST00000376237 AFF1P51825 1210 aaKnown RBP24.7■■□□□ 1.54
HLA-C-202ENST00000376237 TRIM14Q14142 442 aa24.7■■□□□ 1.54
HLA-C-202ENST00000376237 NAB2Q15742 525 aa24.7■■□□□ 1.54
HLA-C-202ENST00000376237 FIGNQ5HY92 759 aa24.7■■□□□ 1.54
HLA-C-202ENST00000376237 NEK11Q8NG66 645 aa24.7■■□□□ 1.54
HLA-C-202ENST00000376237 C18orf25Q96B23 403 aaPredicted RBP24.7■■□□□ 1.54
HLA-C-202ENST00000376237 FAM84AQ96KN4 292 aa24.7■■□□□ 1.54
HLA-C-202ENST00000376237 BUD13Q9BRD0 619 aaKnown RBP eCLIP24.7■■□□□ 1.543e-7■■□□□ 12.7
HLA-C-202ENST00000376237 TUBGCP4Q9UGJ1 667 aa24.7■■□□□ 1.54
HLA-C-202ENST00000376237 PLAGL2Q9UPG8 496 aa24.7■■□□□ 1.54
HLA-C-202ENST00000376237 LTBP2Q14767 1821 aa24.69■■□□□ 1.54
HLA-C-202ENST00000376237 KRT19P08727 400 aa24.69■■□□□ 1.54
HLA-C-202ENST00000376237 TRIM21P19474 475 aaKnown RBP24.69■■□□□ 1.54
HLA-C-202ENST00000376237 RPL9P32969 192 aaKnown RBP24.69■■□□□ 1.54
HLA-C-202ENST00000376237 EPHB4P54760 987 aa24.69■■□□□ 1.54
HLA-C-202ENST00000376237 CXorf38Q8TB03 319 aa24.69■■□□□ 1.54
HLA-C-202ENST00000376237 HERVK_113Q902F9 699 aa24.69■■□□□ 1.54
HLA-C-202ENST00000376237 SEMA4DQ92854 862 aa24.69■■□□□ 1.54
HLA-C-202ENST00000376237 CASD1Q96PB1 797 aa24.69■■□□□ 1.54
HLA-C-202ENST00000376237 LSM14BQ9BX40 385 aaKnown RBP24.69■■□□□ 1.54
HLA-C-202ENST00000376237 SIX4Q9UIU6 781 aa24.69■■□□□ 1.54
HLA-C-202ENST00000376237 AGAP1Q9UPQ3 857 aa24.69■■□□□ 1.54
HLA-C-202ENST00000376237 MICAL3Q7RTP6 2002 aa24.69■■□□□ 1.54
HLA-C-202ENST00000376237 ANO9A1A5B4 782 aa24.68■■□□□ 1.54
HLA-C-202ENST00000376237 DGKIO75912 1065 aa24.68■■□□□ 1.54
HLA-C-202ENST00000376237 UPP2O95045 317 aa24.68■■□□□ 1.54
HLA-C-202ENST00000376237 STAU1O95793 577 aaKnown RBP24.68■■□□□ 1.54
HLA-C-202ENST00000376237 RFX1P22670 979 aa24.68■■□□□ 1.54
HLA-C-202ENST00000376237 POLR2BP30876 1174 aaKnown RBP24.68■■□□□ 1.54
HLA-C-202ENST00000376237 TUSC3Q13454 348 aa24.68■■□□□ 1.54
HLA-C-202ENST00000376237 TMC6Q7Z403 805 aa24.68■■□□□ 1.54
HLA-C-202ENST00000376237 LRRC52Q8N7C0 313 aa24.68■■□□□ 1.54
HLA-C-202ENST00000376237 DDX27Q96GQ7 796 aaKnown RBP24.68■■□□□ 1.54
HLA-C-202ENST00000376237 FAXDC2Q96IV6 333 aa24.68■■□□□ 1.54
HLA-C-202ENST00000376237 FAM81BQ96LP2 452 aa24.68■■□□□ 1.54
HLA-C-202ENST00000376237 UROC1Q96N76 676 aa24.68■■□□□ 1.54
HLA-C-202ENST00000376237 NT5C1BQ96P26 610 aa24.68■■□□□ 1.54
HLA-C-202ENST00000376237 EDEM3Q9BZQ6 932 aa24.68■■□□□ 1.54
HLA-C-202ENST00000376237 VRTNQ9H8Y1 702 aa24.68■■□□□ 1.54
HLA-C-202ENST00000376237 FAM207AQ9NSI2 230 aaPredicted RBP24.68■■□□□ 1.54
HLA-C-202ENST00000376237 IMPACTQ9P2X3 320 aa24.68■■□□□ 1.54
HLA-C-202ENST00000376237 APEX2Q9UBZ4 518 aa24.68■■□□□ 1.54
HLA-C-202ENST00000376237 FBXL5Q9UKA1 691 aa24.68■■□□□ 1.54
HLA-C-202ENST00000376237 ZBBXA8MT70 800 aa24.67■■□□□ 1.54
HLA-C-202ENST00000376237 ASS1P00966 412 aaKnown RBP24.67■■□□□ 1.54
HLA-C-202ENST00000376237 PNPLA4P41247 253 aa24.67■■□□□ 1.54
HLA-C-202ENST00000376237 KLK7P49862 253 aa24.67■■□□□ 1.54
HLA-C-202ENST00000376237 DEFB103AP81534 67 aa24.67■■□□□ 1.54
HLA-C-202ENST00000376237 RNASELQ05823 741 aaKnown RBP24.67■■□□□ 1.54
HLA-C-202ENST00000376237 MYO1EQ12965 1108 aa24.67■■□□□ 1.54
HLA-C-202ENST00000376237 PTPN21Q16825 1174 aa24.67■■□□□ 1.54
HLA-C-202ENST00000376237 KLHDC7AQ5VTJ3 777 aa24.67■■□□□ 1.54
HLA-C-202ENST00000376237 C9orf57Q5W0N0 161 aa24.67■■□□□ 1.54
HLA-C-202ENST00000376237 TBC1D13Q9NVG8 400 aa24.67■■□□□ 1.54
HLA-C-202ENST00000376237 GOLGA6L6A8MZA4 724 aa24.66■■□□□ 1.54
HLA-C-202ENST00000376237 PIRO00625 290 aa24.66■■□□□ 1.54
HLA-C-202ENST00000376237 CAPN15O75808 1086 aa24.66■■□□□ 1.54
HLA-C-202ENST00000376237 TPM1P09493 284 aa24.66■■□□□ 1.54
HLA-C-202ENST00000376237 GUCY2FP51841 1108 aa24.66■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms