RNA–Protein interactions for RNA: ENST00000369604.5

PHTF1-204, Transcript of putative homeodomain transcription factor 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PHTF1, Length 3,273 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF1-204ENST00000369604 ANAPC7Q9UJX3 599 aa15.27■□□□□ 0.03
PHTF1-204ENST00000369604 SUGT1Q9Y2Z0 365 aa15.27■□□□□ 0.03
PHTF1-204ENST00000369604 MAGEB2O15479 319 aa15.27■□□□□ 0.03
PHTF1-204ENST00000369604 PIK3CAP42336 1068 aa15.27■□□□□ 0.03
PHTF1-204ENST00000369604 OCRLQ01968 901 aa15.27■□□□□ 0.03
PHTF1-204ENST00000369604 NR1H3Q13133 447 aa15.27■□□□□ 0.03
PHTF1-204ENST00000369604 ODR4Q5SWX8 454 aa15.27■□□□□ 0.03
PHTF1-204ENST00000369604 SPIRE2Q8WWL2 714 aa15.27■□□□□ 0.03
PHTF1-204ENST00000369604 ZNF75CPQ92670 426 aaPredicted RBP15.27■□□□□ 0.03
PHTF1-204ENST00000369604 MKNK1Q9BUB5 465 aa15.27■□□□□ 0.03
PHTF1-204ENST00000369604 SYNCQ9H7C4 482 aa15.27■□□□□ 0.03
PHTF1-204ENST00000369604 ARL8BQ9NVJ2 186 aa15.27■□□□□ 0.03
PHTF1-204ENST00000369604 PDP2Q9P2J9 529 aa15.27■□□□□ 0.03
PHTF1-204ENST00000369604 R3HDM2Q9Y2K5 976 aaKnown RBP15.27■□□□□ 0.03
PHTF1-204ENST00000369604 ZWINTO95229 277 aa15.26■□□□□ 0.03
PHTF1-204ENST00000369604 BAG2O95816 211 aa15.26■□□□□ 0.03
PHTF1-204ENST00000369604 ESRRAP11474 423 aaPredicted RBP15.26■□□□□ 0.03
PHTF1-204ENST00000369604 DLG4P78352 724 aa15.26■□□□□ 0.03
PHTF1-204ENST00000369604 ITPK1Q13572 414 aa15.26■□□□□ 0.03
PHTF1-204ENST00000369604 CERKLQ49MI3 558 aaPredicted RBP15.26■□□□□ 0.03
PHTF1-204ENST00000369604 CCDC62Q6P9F0 684 aa15.26■□□□□ 0.03
PHTF1-204ENST00000369604 STXBP4Q6ZWJ1 553 aa15.26■□□□□ 0.03
PHTF1-204ENST00000369604 NOP9Q86U38 636 aaKnown RBP15.26■□□□□ 0.03
PHTF1-204ENST00000369604 CCDC89Q8N998 374 aa15.26■□□□□ 0.03
PHTF1-204ENST00000369604 VCX3BQ9H321 246 aa15.26■□□□□ 0.03
PHTF1-204ENST00000369604 VCX3AQ9NNX9 186 aa15.26■□□□□ 0.03
PHTF1-204ENST00000369604 RPL26L1Q9UNX3 145 aaKnown RBP15.26■□□□□ 0.03
PHTF1-204ENST00000369604 SMG5Q9UPR3 1016 aaKnown RBP15.26■□□□□ 0.03
PHTF1-204ENST00000369604 ZBTB39O15060 712 aa15.26■□□□□ 0.03
PHTF1-204ENST00000369604 GSC2O15499 205 aa15.26■□□□□ 0.03
PHTF1-204ENST00000369604 SYDE1Q6ZW31 735 aaPredicted RBP15.26■□□□□ 0.03
PHTF1-204ENST00000369604 SLC47A2Q86VL8 602 aa15.26■□□□□ 0.03
PHTF1-204ENST00000369604 RPGRQ92834 1020 aaKnown RBP15.26■□□□□ 0.03
PHTF1-204ENST00000369604 EIF2AK1Q9BQI3 630 aaKnown RBP15.26■□□□□ 0.03
PHTF1-204ENST00000369604 RTFDC1Q9BY42 306 aaPredicted RBP15.26■□□□□ 0.03
PHTF1-204ENST00000369604 DCLK3Q9C098 648 aa15.26■□□□□ 0.03
PHTF1-204ENST00000369604 UBE2OQ9C0C9 1292 aaKnown RBP15.26■□□□□ 0.03
PHTF1-204ENST00000369604 SAR1AQ9NR31 198 aa15.26■□□□□ 0.03
PHTF1-204ENST00000369604 COL22A1Q8NFW1 1626 aaPredicted RBP15.25■□□□□ 0.03
PHTF1-204ENST00000369604 ECE2O60344 883 aa15.25■□□□□ 0.03
PHTF1-204ENST00000369604 SORBS3O60504 671 aa15.25■□□□□ 0.03
PHTF1-204ENST00000369604 SNAP25P60880 206 aa15.25■□□□□ 0.03
PHTF1-204ENST00000369604 P3H1Q32P28 736 aa15.25■□□□□ 0.03
PHTF1-204ENST00000369604 BBOF1Q8ND07 529 aa15.25■□□□□ 0.03
PHTF1-204ENST00000369604 RFWD2Q8NHY2 731 aa15.25■□□□□ 0.03
PHTF1-204ENST00000369604 CERKQ8TCT0 537 aa15.25■□□□□ 0.03
PHTF1-204ENST00000369604 FAM210AQ96ND0 272 aa15.25■□□□□ 0.03
PHTF1-204ENST00000369604 ZNF184Q99676 751 aaPredicted RBP15.25■□□□□ 0.03
PHTF1-204ENST00000369604 OLFML3Q9NRN5 406 aa15.25■□□□□ 0.03
PHTF1-204ENST00000369604 ANKFY1Q9P2R3 1169 aa15.25■□□□□ 0.03
PHTF1-204ENST00000369604 ATAD5Q96QE3 1844 aa15.25■□□□□ 0.03
PHTF1-204ENST00000369604 A0A1W2PPM1 405 aa15.25■□□□□ 0.03
PHTF1-204ENST00000369604 C2CD2LO14523 706 aa15.25■□□□□ 0.03
PHTF1-204ENST00000369604 TRAFD1O14545 582 aaPredicted RBP15.25■□□□□ 0.03
PHTF1-204ENST00000369604 HNRNPCL1O60812 293 aaKnown RBP15.25■□□□□ 0.03
PHTF1-204ENST00000369604 SLC51AQ86UW1 340 aa15.25■□□□□ 0.03
PHTF1-204ENST00000369604 NBPF5PQ86XG9 351 aaPredicted RBP15.25■□□□□ 0.03
PHTF1-204ENST00000369604 RIBC1Q8N443 379 aaPredicted RBP15.25■□□□□ 0.03
PHTF1-204ENST00000369604 WDR60Q8WVS4 1066 aa15.25■□□□□ 0.03
PHTF1-204ENST00000369604 NSL1Q96IY1 281 aa15.25■□□□□ 0.03
PHTF1-204ENST00000369604 CYTH2Q99418 400 aa15.25■□□□□ 0.03
PHTF1-204ENST00000369604 NDNQ99608 321 aa15.25■□□□□ 0.03
PHTF1-204ENST00000369604 ATF5Q9Y2D1 282 aaPredicted RBP15.25■□□□□ 0.03
PHTF1-204ENST00000369604 WASF2Q9Y6W5 498 aa15.25■□□□□ 0.03
PHTF1-204ENST00000369604 SIGLEC16A6NMB1 481 aa15.25■□□□□ 0.03
PHTF1-204ENST00000369604 KRT4P19013 534 aa15.25■□□□□ 0.03
PHTF1-204ENST00000369604 CPA2P48052 419 aa15.25■□□□□ 0.03
PHTF1-204ENST00000369604 MCL1Q07820 350 aa15.25■□□□□ 0.03
PHTF1-204ENST00000369604 IKQ13123 557 aaPredicted RBP15.25■□□□□ 0.03
PHTF1-204ENST00000369604 QRICH1Q2TAL8 776 aa15.25■□□□□ 0.03
PHTF1-204ENST00000369604 USH1GQ495M9 461 aa15.25■□□□□ 0.03
PHTF1-204ENST00000369604 PCNX4Q63HM2 1172 aa15.25■□□□□ 0.03
PHTF1-204ENST00000369604 DMAP1Q9NPF5 467 aaPredicted RBP15.25■□□□□ 0.03
PHTF1-204ENST00000369604 ZMYM2Q9UBW7 1377 aa15.25■□□□□ 0.03
PHTF1-204ENST00000369604 GOLGA8RI6L899 631 aa15.24■□□□□ 0.03
PHTF1-204ENST00000369604 EIF3DO15371 548 aaKnown RBP eCLIP15.24■□□□□ 0.03
PHTF1-204ENST00000369604 ETS2P15036 469 aa15.24■□□□□ 0.03
PHTF1-204ENST00000369604 SPIRE1Q08AE8 756 aa15.24■□□□□ 0.03
PHTF1-204ENST00000369604 AP1B1Q10567 949 aa15.24■□□□□ 0.03
PHTF1-204ENST00000369604 CFAP157Q5JU67 520 aa15.24■□□□□ 0.03
PHTF1-204ENST00000369604 DAB2IPQ5VWQ8 1189 aa15.24■□□□□ 0.03
PHTF1-204ENST00000369604 EPS8L1Q8TE68 723 aa15.24■□□□□ 0.03
PHTF1-204ENST00000369604 DENND1AQ8TEH3 1009 aa15.24■□□□□ 0.03
PHTF1-204ENST00000369604 SLCO2A1Q92959 643 aa15.24■□□□□ 0.03
PHTF1-204ENST00000369604 FAM161BQ96MY7 647 aa15.24■□□□□ 0.03
PHTF1-204ENST00000369604 LARSQ9P2J5 1176 aaKnown RBP15.24■□□□□ 0.03
PHTF1-204ENST00000369604 LNPEPQ9UIQ6 1025 aa15.24■□□□□ 0.03
PHTF1-204ENST00000369604 RALAP11233 206 aa15.24■□□□□ 0.03
PHTF1-204ENST00000369604 EEF2P13639 858 aaKnown RBP15.24■□□□□ 0.03
PHTF1-204ENST00000369604 PGM1P36871 562 aa15.24■□□□□ 0.03
PHTF1-204ENST00000369604 ARFIP2P53365 341 aa15.24■□□□□ 0.03
PHTF1-204ENST00000369604 PLEKHG4Q58EX7 1191 aa15.24■□□□□ 0.03
PHTF1-204ENST00000369604 PTF1AQ7RTS3 328 aa15.24■□□□□ 0.03
PHTF1-204ENST00000369604 ETNPPLQ8TBG4 499 aa15.24■□□□□ 0.03
PHTF1-204ENST00000369604 PSPC1Q8WXF1 523 aaKnown RBP15.24■□□□□ 0.03
PHTF1-204ENST00000369604 IFT43Q96FT9 208 aa15.24■□□□□ 0.03
PHTF1-204ENST00000369604 HERPUD2Q9BSE4 406 aa15.24■□□□□ 0.03
PHTF1-204ENST00000369604 TIPINQ9BVW5 301 aa15.24■□□□□ 0.03
PHTF1-204ENST00000369604 TRIM55Q9BYV6 548 aa15.24■□□□□ 0.03
PHTF1-204ENST00000369604 FAM192AQ9GZU8 254 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms