RNA–Protein interactions for RNA: ENST00000368530.6

TPM3-210, Transcript of tropomyosin 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TPM3, Length 1,523 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-210ENST00000368530 ANKRD20A12PQ8NF67 263 aa10.88□□□□□ -0.67
TPM3-210ENST00000368530 SCLT1Q96NL6 688 aa10.88□□□□□ -0.67
TPM3-210ENST00000368530 KLHL5Q96PQ7 755 aa10.88□□□□□ -0.67
TPM3-210ENST00000368530 MINDY3Q9H8M7 445 aa10.88□□□□□ -0.67
TPM3-210ENST00000368530 IMPACTQ9P2X3 320 aa10.88□□□□□ -0.67
TPM3-210ENST00000368530 MAGEC2Q9UBF1 373 aaPredicted RBP10.88□□□□□ -0.67
TPM3-210ENST00000368530 SEPT9Q9UHD8 586 aaPredicted RBP10.88□□□□□ -0.67
TPM3-210ENST00000368530 PIN4Q9Y237 131 aaKnown RBP10.88□□□□□ -0.67
TPM3-210ENST00000368530 VPS13AQ96RL7 3174 aa10.87□□□□□ -0.67
TPM3-210ENST00000368530 A0A1B0GTH6 734 aa10.87□□□□□ -0.67
TPM3-210ENST00000368530 TBCAO75347 108 aaKnown RBP10.87□□□□□ -0.67
TPM3-210ENST00000368530 SKIP12755 728 aa10.87□□□□□ -0.67
TPM3-210ENST00000368530 SFPQP23246 707 aaKnown RBP eCLIP10.87□□□□□ -0.67
TPM3-210ENST00000368530 DNM2P50570 870 aa10.87□□□□□ -0.67
TPM3-210ENST00000368530 CLCN4P51793 760 aa10.87□□□□□ -0.67
TPM3-210ENST00000368530 CLCN5P51795 746 aa10.87□□□□□ -0.67
TPM3-210ENST00000368530 COPB1P53618 953 aaKnown RBP10.87□□□□□ -0.67
TPM3-210ENST00000368530 NPEPPSP55786 919 aa10.87□□□□□ -0.67
TPM3-210ENST00000368530 GSDMDP57764 484 aa10.87□□□□□ -0.67
TPM3-210ENST00000368530 SPAG1Q07617 926 aa10.87□□□□□ -0.67
TPM3-210ENST00000368530 PLA2G4FQ68DD2 849 aa10.87□□□□□ -0.67
TPM3-210ENST00000368530 CWF19L1Q69YN2 538 aaKnown RBP10.87□□□□□ -0.67
TPM3-210ENST00000368530 ARMCX5Q6P1M9 558 aa10.87□□□□□ -0.67
TPM3-210ENST00000368530 TMC5Q6UXY8 1006 aa10.87□□□□□ -0.67
TPM3-210ENST00000368530 SFR1Q86XK3 245 aa10.87□□□□□ -0.67
TPM3-210ENST00000368530 IRF2BP1Q8IU81 584 aa10.87□□□□□ -0.67
TPM3-210ENST00000368530 LRRC8AQ8IWT6 810 aa10.87□□□□□ -0.67
TPM3-210ENST00000368530 NELFCDQ8IXH7 590 aa10.87□□□□□ -0.67
TPM3-210ENST00000368530 TDRD5Q8NAT2 981 aaKnown RBP10.87□□□□□ -0.67
TPM3-210ENST00000368530 NACC1Q96RE7 527 aa10.87□□□□□ -0.67
TPM3-210ENST00000368530 INO80BQ9C086 356 aaPredicted RBP10.87□□□□□ -0.67
TPM3-210ENST00000368530 THAP9Q9H5L6 903 aa10.87□□□□□ -0.67
TPM3-210ENST00000368530 CYP26B1Q9NR63 512 aa10.87□□□□□ -0.67
TPM3-210ENST00000368530 AGPAT5Q9NUQ2 364 aa10.87□□□□□ -0.67
TPM3-210ENST00000368530 LIMA1Q9UHB6 759 aaKnown RBP10.87□□□□□ -0.67
TPM3-210ENST00000368530 PCDHB2Q9Y5E7 798 aa10.87□□□□□ -0.67
TPM3-210ENST00000368530 ARHGEF35A5YM69 484 aa10.86□□□□□ -0.67
TPM3-210ENST00000368530 CARNS1A5YM72 827 aa10.86□□□□□ -0.67
TPM3-210ENST00000368530 PES1O00541 588 aaKnown RBP10.86□□□□□ -0.67
TPM3-210ENST00000368530 N4BP3O15049 544 aa10.86□□□□□ -0.67
TPM3-210ENST00000368530 PI15O43692 258 aa10.86□□□□□ -0.67
TPM3-210ENST00000368530 N4BP1O75113 896 aaKnown RBP10.86□□□□□ -0.67
TPM3-210ENST00000368530 P4HBP07237 508 aaKnown RBP10.86□□□□□ -0.67
TPM3-210ENST00000368530 CNPP09543 421 aaKnown RBP10.86□□□□□ -0.67
TPM3-210ENST00000368530 RAB27AP51159 221 aa10.86□□□□□ -0.67
TPM3-210ENST00000368530 PSMC5P62195 406 aa10.86□□□□□ -0.67
TPM3-210ENST00000368530 NR1I3Q14994 352 aa10.86□□□□□ -0.67
TPM3-210ENST00000368530 COBLL1Q53SF7 1204 aa10.86□□□□□ -0.67
TPM3-210ENST00000368530 RINT1Q6NUQ1 792 aa10.86□□□□□ -0.67
TPM3-210ENST00000368530 TAS1R1Q7RTX1 841 aa10.86□□□□□ -0.67
TPM3-210ENST00000368530 CATSPER4Q7RTX7 472 aa10.86□□□□□ -0.67
TPM3-210ENST00000368530 RNF168Q8IYW5 571 aaPredicted RBP10.86□□□□□ -0.67
TPM3-210ENST00000368530 GUF1Q8N442 669 aaKnown RBP10.86□□□□□ -0.67
TPM3-210ENST00000368530 NOC3LQ8WTT2 800 aaKnown RBP10.86□□□□□ -0.67
TPM3-210ENST00000368530 PRPF31Q8WWY3 499 aaKnown RBP10.86□□□□□ -0.67
TPM3-210ENST00000368530 DHX33Q9H6R0 707 aaKnown RBP10.86□□□□□ -0.67
TPM3-210ENST00000368530 DBR1Q9UK59 544 aaKnown RBP10.86□□□□□ -0.67
TPM3-210ENST00000368530 INPP5FQ9Y2H2 1132 aa10.86□□□□□ -0.67
TPM3-210ENST00000368530 RIF1Q5UIP0 2472 aaKnown RBP10.85□□□□□ -0.67
TPM3-210ENST00000368530 ARID2Q68CP9 1835 aa10.85□□□□□ -0.67
TPM3-210ENST00000368530 PTPRZ1P23471 2315 aaPredicted RBP10.85□□□□□ -0.67
TPM3-210ENST00000368530 FRMD3A2A2Y4 597 aa10.85□□□□□ -0.67
TPM3-210ENST00000368530 PRR23AA6NEV1 266 aa10.85□□□□□ -0.67
TPM3-210ENST00000368530 SFI1A8K8P3 1242 aa10.85□□□□□ -0.67
TPM3-210ENST00000368530 NRP1O14786 923 aa10.85□□□□□ -0.67
TPM3-210ENST00000368530 INPPL1O15357 1258 aa10.85□□□□□ -0.67
TPM3-210ENST00000368530 ZNF500O60304 480 aaPredicted RBP10.85□□□□□ -0.67
TPM3-210ENST00000368530 FAM13AO94988 1023 aa10.85□□□□□ -0.67
TPM3-210ENST00000368530 PAPLNO95428 1278 aa10.85□□□□□ -0.67
TPM3-210ENST00000368530 CA8P35219 290 aa10.85□□□□□ -0.67
TPM3-210ENST00000368530 CASP5P51878 434 aa10.85□□□□□ -0.67
TPM3-210ENST00000368530 BMS1Q14692 1282 aaKnown RBP10.85□□□□□ -0.67
TPM3-210ENST00000368530 SPECC1LQ69YQ0 1117 aa10.85□□□□□ -0.67
TPM3-210ENST00000368530 CENPPQ6IPU0 288 aa10.85□□□□□ -0.67
TPM3-210ENST00000368530 PPFIBP1Q86W92 1011 aa10.85□□□□□ -0.67
TPM3-210ENST00000368530 CCDC150Q8NCX0 1101 aa10.85□□□□□ -0.67
TPM3-210ENST00000368530 SMG8Q8ND04 991 aaKnown RBP10.85□□□□□ -0.67
TPM3-210ENST00000368530 CNOT6LQ96LI5 555 aaKnown RBP10.85□□□□□ -0.67
TPM3-210ENST00000368530 NLRP4Q96MN2 994 aa10.85□□□□□ -0.67
TPM3-210ENST00000368530 TSG101Q99816 390 aa10.85□□□□□ -0.67
TPM3-210ENST00000368530 GBP3Q9H0R5 595 aa10.85□□□□□ -0.67
TPM3-210ENST00000368530 ZSWIM4Q9H7M6 989 aa10.85□□□□□ -0.67
TPM3-210ENST00000368530 MARCH5Q9NX47 278 aa10.85□□□□□ -0.67
TPM3-210ENST00000368530 COL4A3BPQ9Y5P4 624 aa10.85□□□□□ -0.67
TPM3-210ENST00000368530 SPTBN4Q9H254 2564 aa10.85□□□□□ -0.67
TPM3-210ENST00000368530 DENND4AQ7Z401 1863 aa10.85□□□□□ -0.67
TPM3-210ENST00000368530 ALDH2P05091 517 aa10.84□□□□□ -0.67
TPM3-210ENST00000368530 MYBP10242 640 aa10.84□□□□□ -0.67
TPM3-210ENST00000368530 SKILP12757 684 aa10.84□□□□□ -0.67
TPM3-210ENST00000368530 PRKCSHP14314 528 aaPredicted RBP10.84□□□□□ -0.67
TPM3-210ENST00000368530 MUTP22033 750 aa10.84□□□□□ -0.67
TPM3-210ENST00000368530 EEF1GP26641 437 aaKnown RBP10.84□□□□□ -0.67
TPM3-210ENST00000368530 CLCN1P35523 988 aa10.84□□□□□ -0.67
TPM3-210ENST00000368530 MTIF2P46199 727 aaKnown RBP10.84□□□□□ -0.67
TPM3-210ENST00000368530 QARSP47897 775 aaKnown RBP10.84□□□□□ -0.67
TPM3-210ENST00000368530 CCZ1BP86790 482 aa10.84□□□□□ -0.67
TPM3-210ENST00000368530 CCZ1P86791 482 aaPredicted RBP10.84□□□□□ -0.67
TPM3-210ENST00000368530 RNASELQ05823 741 aaKnown RBP10.84□□□□□ -0.67
TPM3-210ENST00000368530 C15orf39Q6ZRI6 1047 aa10.84□□□□□ -0.67
TPM3-210ENST00000368530 C1orf186Q6ZWK4 172 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms