RNA–Protein interactions for RNA: ENST00000367478.8

TPR-201, Transcript of translocated promoter region, nuclear basket protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TPR, Length 9,708 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPR-201ENST00000367478 SLC26A4O43511 780 aa13.03□□□□□ -0.32
TPR-201ENST00000367478 PDE5AO76074 875 aa13.03□□□□□ -0.32
TPR-201ENST00000367478 SPRP35270 261 aaPredicted RBP13.03□□□□□ -0.32
TPR-201ENST00000367478 FRMD5Q7Z6J6 570 aa13.03□□□□□ -0.32
TPR-201ENST00000367478 WDR19Q8NEZ3 1342 aa13.03□□□□□ -0.32
TPR-201ENST00000367478 PNMA8CA0A1B0GUJ8 204 aa13.03□□□□□ -0.32
TPR-201ENST00000367478 CFAP99D6REC4 459 aa13.03□□□□□ -0.32
TPR-201ENST00000367478 KRT6BP04259 564 aa13.03□□□□□ -0.32
TPR-201ENST00000367478 CYBBP04839 570 aa13.03□□□□□ -0.32
TPR-201ENST00000367478 KRT6CP48668 564 aa13.03□□□□□ -0.32
TPR-201ENST00000367478 CCT8P50990 548 aa13.03□□□□□ -0.32
TPR-201ENST00000367478 PRELPP51888 382 aa13.03□□□□□ -0.32
TPR-201ENST00000367478 SLC27A3Q5K4L6 730 aa13.03□□□□□ -0.32
TPR-201ENST00000367478 NEK10Q6ZWH5 1172 aa13.03□□□□□ -0.32
TPR-201ENST00000367478 ECSITQ9BQ95 431 aa13.03□□□□□ -0.32
TPR-201ENST00000367478 CARD9Q9H257 536 aa13.03□□□□□ -0.32
TPR-201ENST00000367478 SYCP2LQ5T4T6 812 aa13.03□□□□□ -0.32
TPR-201ENST00000367478 ASZ1Q8WWH4 475 aa13.03□□□□□ -0.32
TPR-201ENST00000367478 UBAP1Q9NZ09 502 aa13.03□□□□□ -0.32
TPR-201ENST00000367478 YEATS2Q9ULM3 1422 aa13.03□□□□□ -0.32
TPR-201ENST00000367478 BIVM-ERCC5R4GMW8 1640 aa13.03□□□□□ -0.32
TPR-201ENST00000367478 USP13Q92995 863 aaPredicted RBP13.03□□□□□ -0.32
TPR-201ENST00000367478 QKIQ96PU8 341 aaKnown RBP eCLIP13.03□□□□□ -0.323e-6■■■■■ 41.9
TPR-201ENST00000367478 ARHGEF38Q9NXL2 777 aa13.03□□□□□ -0.32
TPR-201ENST00000367478 GRID1Q9ULK0 1009 aa13.03□□□□□ -0.32
TPR-201ENST00000367478 RNF123Q5XPI4 1314 aa13.03□□□□□ -0.32
TPR-201ENST00000367478 ABCC10Q5T3U5 1492 aa13.03□□□□□ -0.32
TPR-201ENST00000367478 SHANK2Q9UPX8 1470 aa13.03□□□□□ -0.32
TPR-201ENST00000367478 ASNSP08243 561 aa13.03□□□□□ -0.32
TPR-201ENST00000367478 PLOD1Q02809 727 aaPredicted RBP13.03□□□□□ -0.32
TPR-201ENST00000367478 GFPT1Q06210 699 aaPredicted RBP13.03□□□□□ -0.32
TPR-201ENST00000367478 MLH3Q9UHC1 1453 aa13.03□□□□□ -0.32
TPR-201ENST00000367478 FCGR1AP12314 374 aa13.03□□□□□ -0.32
TPR-201ENST00000367478 PTK6Q13882 451 aa13.03□□□□□ -0.32
TPR-201ENST00000367478 FAM83BQ5T0W9 1011 aa13.03□□□□□ -0.32
TPR-201ENST00000367478 TMC5Q6UXY8 1006 aa13.03□□□□□ -0.32
TPR-201ENST00000367478 DPP10Q8N608 796 aa13.03□□□□□ -0.32
TPR-201ENST00000367478 PKP3Q9Y446 797 aa13.03□□□□□ -0.32
TPR-201ENST00000367478 KCNJ6P48051 423 aa13.03□□□□□ -0.32
TPR-201ENST00000367478 FBXL5Q9UKA1 691 aa13.03□□□□□ -0.32
TPR-201ENST00000367478 POLIQ9UNA4 740 aa13.03□□□□□ -0.32
TPR-201ENST00000367478 APRTP07741 180 aa13.02□□□□□ -0.32
TPR-201ENST00000367478 TPI1P60174 286 aa13.02□□□□□ -0.32
TPR-201ENST00000367478 DCAF4L1Q3SXM0 396 aa13.02□□□□□ -0.32
TPR-201ENST00000367478 ZBED2Q9BTP6 218 aa13.02□□□□□ -0.32
TPR-201ENST00000367478 DHX35Q9H5Z1 703 aaKnown RBP13.02□□□□□ -0.32
TPR-201ENST00000367478 M0QYV0 167 aa13.02□□□□□ -0.32
TPR-201ENST00000367478 PDE9AO76083 593 aa13.02□□□□□ -0.32
TPR-201ENST00000367478 CCDC60Q8IWA6 550 aaPredicted RBP13.02□□□□□ -0.32
TPR-201ENST00000367478 COPB2P35606 906 aa13.02□□□□□ -0.32
TPR-201ENST00000367478 SHROOM1Q2M3G4 852 aaPredicted RBP13.02□□□□□ -0.32
TPR-201ENST00000367478 SPATA4Q8NEY3 305 aa13.02□□□□□ -0.32
TPR-201ENST00000367478 MED15Q96RN5 788 aa13.02□□□□□ -0.32
TPR-201ENST00000367478 ABCC2Q92887 1545 aa13.02□□□□□ -0.33
TPR-201ENST00000367478 SF3B1O75533 1304 aaKnown RBP eCLIP13.02□□□□□ -0.337e-7■■■■■ 52.4
TPR-201ENST00000367478 LMTK3Q96Q04 1460 aa13.02□□□□□ -0.33
TPR-201ENST00000367478 DFFAO00273 331 aa13.02□□□□□ -0.33
TPR-201ENST00000367478 KCNN4O15554 427 aa13.02□□□□□ -0.33
TPR-201ENST00000367478 TRAPPC3O43617 180 aa13.02□□□□□ -0.33
TPR-201ENST00000367478 CNTN1Q12860 1018 aa13.02□□□□□ -0.33
TPR-201ENST00000367478 SCFD2Q8WU76 684 aa13.02□□□□□ -0.33
TPR-201ENST00000367478 RNPC3Q96LT9 517 aaKnown RBP13.02□□□□□ -0.33
TPR-201ENST00000367478 ARL4DP49703 201 aa13.02□□□□□ -0.33
TPR-201ENST00000367478 MMRN1Q13201 1228 aa13.02□□□□□ -0.33
TPR-201ENST00000367478 ZCWPW2Q504Y3 356 aa13.02□□□□□ -0.33
TPR-201ENST00000367478 NLGN1Q8N2Q7 840 aa13.02□□□□□ -0.33
TPR-201ENST00000367478 MOSPD2Q8NHP6 518 aa13.02□□□□□ -0.33
TPR-201ENST00000367478 NSL1Q96IY1 281 aa13.02□□□□□ -0.33
TPR-201ENST00000367478 STK25O00506 426 aa13.02□□□□□ -0.33
TPR-201ENST00000367478 POLBP06746 335 aa13.02□□□□□ -0.33
TPR-201ENST00000367478 KRT74Q7RTS7 529 aa13.02□□□□□ -0.33
TPR-201ENST00000367478 GRAMD1CQ8IYS0 662 aa13.02□□□□□ -0.33
TPR-201ENST00000367478 AHI1Q8N157 1196 aa13.02□□□□□ -0.33
TPR-201ENST00000367478 STAG2Q8N3U4 1231 aa13.02□□□□□ -0.33
TPR-201ENST00000367478 HSPBP1Q9NZL4 362 aa13.02□□□□□ -0.33
TPR-201ENST00000367478 ENO4A6NNW6 628 aa13.01□□□□□ -0.33
TPR-201ENST00000367478 PPEF1O14829 653 aaPredicted RBP13.01□□□□□ -0.33
TPR-201ENST00000367478 PSMC3P17980 439 aa13.01□□□□□ -0.33
TPR-201ENST00000367478 TMEM179Q6ZVK1 233 aa13.01□□□□□ -0.33
TPR-201ENST00000367478 PPP1R14AQ96A00 147 aa13.01□□□□□ -0.33
TPR-201ENST00000367478 KLHL25Q9H0H3 589 aa13.01□□□□□ -0.33
TPR-201ENST00000367478 SPACA6W5XKT8 324 aa13.01□□□□□ -0.33
TPR-201ENST00000367478 JAK1P23458 1154 aa13.01□□□□□ -0.33
TPR-201ENST00000367478 VSNL1P62760 191 aa13.01□□□□□ -0.33
TPR-201ENST00000367478 LRRC24Q50LG9 513 aa13.01□□□□□ -0.33
TPR-201ENST00000367478 ZNF473Q8WTR7 871 aaKnown RBP13.01□□□□□ -0.33
TPR-201ENST00000367478 PHF2O75151 1096 aa13.01□□□□□ -0.33
TPR-201ENST00000367478 NFRKBQ6P4R8 1299 aa13.01□□□□□ -0.33
TPR-201ENST00000367478 RIN3Q8TB24 985 aa13.01□□□□□ -0.33
TPR-201ENST00000367478 ANKRD49Q8WVL7 239 aa13.01□□□□□ -0.33
TPR-201ENST00000367478 PIGSQ96S52 555 aa13.01□□□□□ -0.33
TPR-201ENST00000367478 MAPKBP1O60336 1514 aa13.01□□□□□ -0.33
TPR-201ENST00000367478 DNALI1O14645 258 aaPredicted RBP13.01□□□□□ -0.33
TPR-201ENST00000367478 GRK2P25098 689 aa13.01□□□□□ -0.33
TPR-201ENST00000367478 PPP3CCP48454 512 aa13.01□□□□□ -0.33
TPR-201ENST00000367478 COPAP53621 1224 aa13.01□□□□□ -0.33
TPR-201ENST00000367478 DRAP1Q14919 205 aaPredicted RBP13.01□□□□□ -0.33
TPR-201ENST00000367478 RCSD1Q6JBY9 416 aa13.01□□□□□ -0.33
TPR-201ENST00000367478 PRPF39Q86UA1 669 aaKnown RBP13.01□□□□□ -0.33
TPR-201ENST00000367478 DNAJC10Q8IXB1 793 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms