RNA–Protein interactions for RNA: ENST00000361781.6

SGMS1-202, Transcript of sphingomyelin synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGMS1, Length 3,744 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-202ENST00000361781 VTI1AQ96AJ9 217 aa14.46□□□□□ -0.09
SGMS1-202ENST00000361781 TRIM11Q96F44 468 aa14.46□□□□□ -0.09
SGMS1-202ENST00000361781 MCEEQ96PE7 176 aa14.46□□□□□ -0.09
SGMS1-202ENST00000361781 IFT122Q9HBG6 1241 aa14.46□□□□□ -0.09
SGMS1-202ENST00000361781 MCF2LO15068 1137 aa14.46□□□□□ -0.09
SGMS1-202ENST00000361781 RASSF9O75901 435 aa14.46□□□□□ -0.09
SGMS1-202ENST00000361781 PGM1P36871 562 aa14.46□□□□□ -0.09
SGMS1-202ENST00000361781 PSMC4P43686 418 aa14.46□□□□□ -0.09
SGMS1-202ENST00000361781 ARL4CP56559 192 aa14.46□□□□□ -0.09
SGMS1-202ENST00000361781 KLC1Q07866 573 aa14.46□□□□□ -0.09
SGMS1-202ENST00000361781 TAF1BQ53T94 588 aaPredicted RBP14.46□□□□□ -0.09
SGMS1-202ENST00000361781 NXNQ6DKJ4 435 aa14.46□□□□□ -0.09
SGMS1-202ENST00000361781 TTC27Q6P3X3 843 aa14.46□□□□□ -0.09
SGMS1-202ENST00000361781 KCNH7Q9NS40 1196 aa14.46□□□□□ -0.09
SGMS1-202ENST00000361781 LAMA4Q16363 1823 aa14.46□□□□□ -0.1
SGMS1-202ENST00000361781 SLIT3O75094 1523 aa14.46□□□□□ -0.1
SGMS1-202ENST00000361781 MEIS2O14770 477 aa14.45□□□□□ -0.1
SGMS1-202ENST00000361781 ENTPD5O75356 428 aa14.45□□□□□ -0.1
SGMS1-202ENST00000361781 LGR5O75473 907 aa14.45□□□□□ -0.1
SGMS1-202ENST00000361781 TRPA1O75762 1119 aa14.45□□□□□ -0.1
SGMS1-202ENST00000361781 ATP13A4Q4VNC1 1196 aa14.45□□□□□ -0.1
SGMS1-202ENST00000361781 TMEM121Q9BTD3 319 aa14.45□□□□□ -0.1
SGMS1-202ENST00000361781 LRRC4CQ9HCJ2 640 aa14.45□□□□□ -0.1
SGMS1-202ENST00000361781 SPATA31A1Q5TZJ5 1347 aa14.45□□□□□ -0.1
SGMS1-202ENST00000361781 WDR64B1ANS9 1081 aa14.45□□□□□ -0.1
SGMS1-202ENST00000361781 EIF3DO15371 548 aaKnown RBP eCLIP14.45□□□□□ -0.1
SGMS1-202ENST00000361781 DNAJC8O75937 253 aaPredicted RBP14.45□□□□□ -0.1
SGMS1-202ENST00000361781 MMP10P09238 476 aa14.45□□□□□ -0.1
SGMS1-202ENST00000361781 GHRP10912 638 aa14.45□□□□□ -0.1
SGMS1-202ENST00000361781 ETS1P14921 441 aa14.45□□□□□ -0.1
SGMS1-202ENST00000361781 IGBP1P78318 339 aa14.45□□□□□ -0.1
SGMS1-202ENST00000361781 RRP1BQ14684 758 aaKnown RBP14.45□□□□□ -0.1
SGMS1-202ENST00000361781 PKN2Q16513 984 aaKnown RBP14.45□□□□□ -0.1
SGMS1-202ENST00000361781 FAXCQ5TGI0 409 aa14.45□□□□□ -0.1
SGMS1-202ENST00000361781 CHADLQ6NUI6 762 aa14.45□□□□□ -0.1
SGMS1-202ENST00000361781 NLRP9Q7RTR0 991 aa14.45□□□□□ -0.1
SGMS1-202ENST00000361781 CCDC125Q86Z20 511 aa14.45□□□□□ -0.1
SGMS1-202ENST00000361781 MTFR1LQ9H019 292 aa14.45□□□□□ -0.1
SGMS1-202ENST00000361781 BATF3Q9NR55 127 aa14.45□□□□□ -0.1
SGMS1-202ENST00000361781 HEY2Q9UBP5 337 aa14.45□□□□□ -0.1
SGMS1-202ENST00000361781 GJA3Q9Y6H8 435 aa14.45□□□□□ -0.1
SGMS1-202ENST00000361781 SETD1AO15047 1707 aaKnown RBP14.45□□□□□ -0.1
SGMS1-202ENST00000361781 INO80B-WBP1J3KQ70 363 aa14.45□□□□□ -0.1
SGMS1-202ENST00000361781 CFLARO15519 480 aa14.45□□□□□ -0.1
SGMS1-202ENST00000361781 SREBF1P36956 1147 aa14.45□□□□□ -0.1
SGMS1-202ENST00000361781 ALDH18A1P54886 795 aaKnown RBP14.45□□□□□ -0.1
SGMS1-202ENST00000361781 CAV1Q03135 178 aa14.45□□□□□ -0.1
SGMS1-202ENST00000361781 CDR2LQ86X02 465 aaPredicted RBP14.45□□□□□ -0.1
SGMS1-202ENST00000361781 CCDC33Q8N5R6 958 aa14.45□□□□□ -0.1
SGMS1-202ENST00000361781 SPDYE1Q8NFV5 336 aaPredicted RBP14.45□□□□□ -0.1
SGMS1-202ENST00000361781 PIP4K2CQ8TBX8 421 aa14.45□□□□□ -0.1
SGMS1-202ENST00000361781 SLC7A3Q8WY07 619 aa14.45□□□□□ -0.1
SGMS1-202ENST00000361781 TMEM143Q96AN5 459 aa14.45□□□□□ -0.1
SGMS1-202ENST00000361781 FAF2Q96CS3 445 aa14.45□□□□□ -0.1
SGMS1-202ENST00000361781 TSNARE1Q96NA8 513 aa14.45□□□□□ -0.1
SGMS1-202ENST00000361781 POLR3CQ9BUI4 534 aaPredicted RBP14.45□□□□□ -0.1
SGMS1-202ENST00000361781 INO80BQ9C086 356 aaPredicted RBP14.45□□□□□ -0.1
SGMS1-202ENST00000361781 MYLK2Q9H1R3 596 aa14.45□□□□□ -0.1
SGMS1-202ENST00000361781 LRRC4BQ9NT99 713 aa14.45□□□□□ -0.1
SGMS1-202ENST00000361781 NINJ2Q9NZG7 142 aa14.45□□□□□ -0.1
SGMS1-202ENST00000361781 MCM8Q9UJA3 840 aa14.45□□□□□ -0.1
SGMS1-202ENST00000361781 TOPAZ1Q8N9V7 1692 aa14.44□□□□□ -0.1
SGMS1-202ENST00000361781 NVLO15381 856 aaKnown RBP14.44□□□□□ -0.1
SGMS1-202ENST00000361781 BANF1O75531 89 aa14.44□□□□□ -0.1
SGMS1-202ENST00000361781 ATXN3P54252 364 aaPredicted RBP14.44□□□□□ -0.1
SGMS1-202ENST00000361781 NCALDP61601 193 aa14.44□□□□□ -0.1
SGMS1-202ENST00000361781 DDR1Q08345 913 aa14.44□□□□□ -0.1
SGMS1-202ENST00000361781 CYP4A22Q5TCH4 519 aa14.44□□□□□ -0.1
SGMS1-202ENST00000361781 THTPAQ9BU02 230 aa14.44□□□□□ -0.1
SGMS1-202ENST00000361781 RXFP1Q9HBX9 757 aa14.44□□□□□ -0.1
SGMS1-202ENST00000361781 SMYD2Q9NRG4 433 aa14.44□□□□□ -0.1
SGMS1-202ENST00000361781 SAE1Q9UBE0 346 aaPredicted RBP14.44□□□□□ -0.1
SGMS1-202ENST00000361781 SLC9A2Q9UBY0 812 aa14.44□□□□□ -0.1
SGMS1-202ENST00000361781 AGAP1Q9UPQ3 857 aa14.44□□□□□ -0.1
SGMS1-202ENST00000361781 H3BRJ5 948 aa14.44□□□□□ -0.1
SGMS1-202ENST00000361781 CAPN9O14815 690 aa14.44□□□□□ -0.1
SGMS1-202ENST00000361781 ATP5HO75947 161 aa14.44□□□□□ -0.1
SGMS1-202ENST00000361781 GSTA1P08263 222 aa14.44□□□□□ -0.1
SGMS1-202ENST00000361781 MMP13P45452 471 aa14.44□□□□□ -0.1
SGMS1-202ENST00000361781 PCNX4Q63HM2 1172 aa14.44□□□□□ -0.1
SGMS1-202ENST00000361781 ATP6V0A1Q93050 837 aa14.44□□□□□ -0.1
SGMS1-202ENST00000361781 GRAMD1AQ96CP6 724 aa14.44□□□□□ -0.1
SGMS1-202ENST00000361781 TSSK1BQ9BXA7 367 aa14.44□□□□□ -0.1
SGMS1-202ENST00000361781 VCX3BQ9H321 246 aa14.44□□□□□ -0.1
SGMS1-202ENST00000361781 C12orf65Q9H3J6 166 aaKnown RBP14.44□□□□□ -0.1
SGMS1-202ENST00000361781 KCNMB3Q9NPA1 279 aa14.44□□□□□ -0.1
SGMS1-202ENST00000361781 LMO7Q8WWI1 1683 aa14.44□□□□□ -0.1
SGMS1-202ENST00000361781 CES2O00748 559 aa14.44□□□□□ -0.1
SGMS1-202ENST00000361781 SSTR1P30872 391 aa14.44□□□□□ -0.1
SGMS1-202ENST00000361781 ORC1Q13415 861 aa14.44□□□□□ -0.1
SGMS1-202ENST00000361781 C1orf228Q6PIY5 440 aa14.44□□□□□ -0.1
SGMS1-202ENST00000361781 SLC30A9Q6PML9 568 aa14.44□□□□□ -0.1
SGMS1-202ENST00000361781 PPP1R36Q96LQ0 422 aa14.44□□□□□ -0.1
SGMS1-202ENST00000361781 FAM111AQ96PZ2 611 aa14.44□□□□□ -0.1
SGMS1-202ENST00000361781 NYAP2Q9P242 653 aa14.44□□□□□ -0.1
SGMS1-202ENST00000361781 SUGT1Q9Y2Z0 365 aa14.44□□□□□ -0.1
SGMS1-202ENST00000361781 ZHX2Q9Y6X8 837 aa14.44□□□□□ -0.1
SGMS1-202ENST00000361781 B2RBV5 119 aa14.43□□□□□ -0.1
SGMS1-202ENST00000361781 POLR2BP30876 1174 aaKnown RBP14.43□□□□□ -0.1
SGMS1-202ENST00000361781 MKRN3Q13064 507 aaKnown RBP14.43□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms