RNA–Protein interactions for RNA: ENST00000361654.8

CLIP1-203, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 5 BASIC

Gene CLIP1, Length 5,568 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-203ENST00000361654 H0Y626 953 aa11.53□□□□□ -0.56
CLIP1-203ENST00000361654 H2AFYO75367 372 aaKnown RBP11.53□□□□□ -0.56
CLIP1-203ENST00000361654 SEC31AO94979 1220 aaKnown RBP11.53□□□□□ -0.56
CLIP1-203ENST00000361654 LMNAP02545 664 aaKnown RBP11.53□□□□□ -0.56
CLIP1-203ENST00000361654 BRAFP15056 766 aa11.53□□□□□ -0.56
CLIP1-203ENST00000361654 EFHC1Q5JVL4 640 aa11.53□□□□□ -0.56
CLIP1-203ENST00000361654 SAMD7Q7Z3H4 446 aa11.53□□□□□ -0.56
CLIP1-203ENST00000361654 FRMD5Q7Z6J6 570 aa11.53□□□□□ -0.56
CLIP1-203ENST00000361654 MOV10L1Q9BXT6 1211 aaKnown RBP11.53□□□□□ -0.56
CLIP1-203ENST00000361654 ING2Q9H160 280 aa11.53□□□□□ -0.56
CLIP1-203ENST00000361654 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.53□□□□□ -0.56
CLIP1-203ENST00000361654 PRDM4Q9UKN5 801 aa11.53□□□□□ -0.56
CLIP1-203ENST00000361654 PKP3Q9Y446 797 aa11.53□□□□□ -0.56
CLIP1-203ENST00000361654 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP11.53□□□□□ -0.56
CLIP1-203ENST00000361654 FAM47E-STBD1D6RA91 191 aa11.53□□□□□ -0.56
CLIP1-203ENST00000361654 LZTS3O60299 673 aaPredicted RBP11.53□□□□□ -0.56
CLIP1-203ENST00000361654 PDGFRAP16234 1089 aa11.53□□□□□ -0.56
CLIP1-203ENST00000361654 ZNF177Q13360 481 aaPredicted RBP11.53□□□□□ -0.56
CLIP1-203ENST00000361654 FBXO38Q6PIJ6 1188 aa11.53□□□□□ -0.56
CLIP1-203ENST00000361654 ZFATQ9P243 1243 aa11.53□□□□□ -0.56
CLIP1-203ENST00000361654 MAD2L2Q9UI95 211 aa11.53□□□□□ -0.56
CLIP1-203ENST00000361654 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.53□□□□□ -0.56
CLIP1-203ENST00000361654 A0A087WUV0 522 aaPredicted RBP11.53□□□□□ -0.56
CLIP1-203ENST00000361654 EEF2KO00418 725 aaKnown RBP11.53□□□□□ -0.56
CLIP1-203ENST00000361654 TDP2O95551 362 aa11.53□□□□□ -0.56
CLIP1-203ENST00000361654 PDGFRBP09619 1106 aa11.53□□□□□ -0.56
CLIP1-203ENST00000361654 DACH2Q96NX9 599 aa11.53□□□□□ -0.56
CLIP1-203ENST00000361654 NOVA2Q9UNW9 492 aaKnown RBP11.53□□□□□ -0.56
CLIP1-203ENST00000361654 FAM32AQ9Y421 112 aaKnown RBP11.53□□□□□ -0.56
CLIP1-203ENST00000361654 ATP8B1O43520 1251 aa11.52□□□□□ -0.56
CLIP1-203ENST00000361654 MAP2K2P36507 400 aa11.52□□□□□ -0.56
CLIP1-203ENST00000361654 PRKCEQ02156 737 aa11.52□□□□□ -0.56
CLIP1-203ENST00000361654 RESTQ13127 1097 aa11.52□□□□□ -0.56
CLIP1-203ENST00000361654 NECTIN1Q15223 517 aa11.52□□□□□ -0.56
CLIP1-203ENST00000361654 TMC7Q7Z402 723 aa11.52□□□□□ -0.56
CLIP1-203ENST00000361654 KCTD17Q8N5Z5 321 aa11.52□□□□□ -0.56
CLIP1-203ENST00000361654 NSUN4Q96CB9 384 aaKnown RBP11.52□□□□□ -0.56
CLIP1-203ENST00000361654 KLHL11Q9NVR0 708 aa11.52□□□□□ -0.56
CLIP1-203ENST00000361654 PRR12Q9ULL5 1215 aa11.52□□□□□ -0.56
CLIP1-203ENST00000361654 VPS9D1Q9Y2B5 631 aa11.52□□□□□ -0.56
CLIP1-203ENST00000361654 TSPOAP1O95153 1857 aa11.52□□□□□ -0.56
CLIP1-203ENST00000361654 POLRMTO00411 1230 aaKnown RBP11.52□□□□□ -0.56
CLIP1-203ENST00000361654 MTSS1O43312 755 aa11.52□□□□□ -0.56
CLIP1-203ENST00000361654 PPP3CCP48454 512 aa11.52□□□□□ -0.56
CLIP1-203ENST00000361654 EPHB3P54753 998 aa11.52□□□□□ -0.56
CLIP1-203ENST00000361654 GPS1Q13098 491 aa11.52□□□□□ -0.56
CLIP1-203ENST00000361654 NCOA4Q13772 614 aa11.52□□□□□ -0.56
CLIP1-203ENST00000361654 FLOT2Q14254 428 aa11.52□□□□□ -0.56
CLIP1-203ENST00000361654 EZH2Q15910 746 aaKnown RBP11.52□□□□□ -0.56
CLIP1-203ENST00000361654 TSEN34Q9BSV6 310 aaKnown RBP11.52□□□□□ -0.56
CLIP1-203ENST00000361654 AXIN2Q9Y2T1 843 aa11.52□□□□□ -0.56
CLIP1-203ENST00000361654 RRP15Q9Y3B9 282 aaKnown RBP11.52□□□□□ -0.56
CLIP1-203ENST00000361654 A0A087WWV3 80 aa11.52□□□□□ -0.57
CLIP1-203ENST00000361654 RASA4BC9J798 803 aa11.52□□□□□ -0.57
CLIP1-203ENST00000361654 SLC16A3O15427 465 aaKnown RBP11.52□□□□□ -0.57
CLIP1-203ENST00000361654 RASA4O43374 803 aa11.52□□□□□ -0.57
CLIP1-203ENST00000361654 ZMYND10O75800 440 aa11.52□□□□□ -0.57
CLIP1-203ENST00000361654 SNRPFP62306 86 aaKnown RBP11.52□□□□□ -0.57
CLIP1-203ENST00000361654 DPYDQ12882 1025 aa11.52□□□□□ -0.57
CLIP1-203ENST00000361654 SLFNL1Q499Z3 407 aa11.52□□□□□ -0.57
CLIP1-203ENST00000361654 PRAMEF18Q5VWM3 479 aa11.52□□□□□ -0.57
CLIP1-203ENST00000361654 RIT2Q99578 217 aa11.52□□□□□ -0.57
CLIP1-203ENST00000361654 EMILIN2Q9BXX0 1053 aa11.52□□□□□ -0.57
CLIP1-203ENST00000361654 RAB23Q9ULC3 237 aa11.52□□□□□ -0.57
CLIP1-203ENST00000361654 BCORL1Q5H9F3 1711 aa11.52□□□□□ -0.57
CLIP1-203ENST00000361654 HECW2Q9P2P5 1572 aa11.52□□□□□ -0.57
CLIP1-203ENST00000361654 GSG1L2A8MUP6 293 aa11.52□□□□□ -0.57
CLIP1-203ENST00000361654 FAM200BP0CF97 657 aa11.52□□□□□ -0.57
CLIP1-203ENST00000361654 HLA-DPA1P20036 260 aa11.52□□□□□ -0.57
CLIP1-203ENST00000361654 NCKAP1LP55160 1127 aa11.52□□□□□ -0.57
CLIP1-203ENST00000361654 ZNF484Q5JVG2 852 aa11.52□□□□□ -0.57
CLIP1-203ENST00000361654 ZNF438Q7Z4V0 828 aa11.52□□□□□ -0.57
CLIP1-203ENST00000361654 ITIH5Q86UX2 942 aa11.52□□□□□ -0.57
CLIP1-203ENST00000361654 HS6ST3Q8IZP7 471 aa11.52□□□□□ -0.57
CLIP1-203ENST00000361654 HES6Q96HZ4 224 aa11.52□□□□□ -0.57
CLIP1-203ENST00000361654 LY9Q9HBG7 655 aa11.52□□□□□ -0.57
CLIP1-203ENST00000361654 ARHGAP26Q9UNA1 814 aa11.52□□□□□ -0.57
CLIP1-203ENST00000361654 SNX24Q9Y343 169 aa11.52□□□□□ -0.57
CLIP1-203ENST00000361654 KRT14P02533 472 aa11.52□□□□□ -0.57
CLIP1-203ENST00000361654 CKMP06732 381 aa11.52□□□□□ -0.57
CLIP1-203ENST00000361654 HSPA1AP0DMV8 641 aaKnown RBP11.52□□□□□ -0.57
CLIP1-203ENST00000361654 HSPA1BP0DMV9 641 aaKnown RBP11.52□□□□□ -0.57
CLIP1-203ENST00000361654 AVPR1AP37288 418 aa11.52□□□□□ -0.57
CLIP1-203ENST00000361654 NAA30Q147X3 362 aaPredicted RBP11.52□□□□□ -0.57
CLIP1-203ENST00000361654 SBK1Q52WX2 424 aa11.52□□□□□ -0.57
CLIP1-203ENST00000361654 CLEC17AQ6ZS10 378 aa11.52□□□□□ -0.57
CLIP1-203ENST00000361654 CD302Q8IX05 232 aa11.52□□□□□ -0.57
CLIP1-203ENST00000361654 GPRASP2Q96D09 838 aa11.52□□□□□ -0.57
CLIP1-203ENST00000361654 PITPNM3Q9BZ71 974 aa11.52□□□□□ -0.57
CLIP1-203ENST00000361654 NSMCE4AQ9NXX6 385 aa11.52□□□□□ -0.57
CLIP1-203ENST00000361654 HSPBP1Q9NZL4 362 aa11.52□□□□□ -0.57
CLIP1-203ENST00000361654 TRPM5Q9NZQ8 1165 aa11.52□□□□□ -0.57
CLIP1-203ENST00000361654 MBL2P11226 248 aaPredicted RBP11.51□□□□□ -0.57
CLIP1-203ENST00000361654 ATN1P54259 1190 aaPredicted RBP11.51□□□□□ -0.57
CLIP1-203ENST00000361654 EIF3EP60228 445 aaKnown RBP11.51□□□□□ -0.57
CLIP1-203ENST00000361654 SNCBQ16143 134 aa11.51□□□□□ -0.57
CLIP1-203ENST00000361654 RABGAP1LQ5R372 815 aa11.51□□□□□ -0.57
CLIP1-203ENST00000361654 ANKS6Q68DC2 871 aa11.51□□□□□ -0.57
CLIP1-203ENST00000361654 ARHGEF38Q9NXL2 777 aa11.51□□□□□ -0.57
CLIP1-203ENST00000361654 PKD2L2Q9NZM6 624 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms