RNA–Protein interactions for RNA: ENST00000360238.6

CUEDC1-201, Transcript of CUE domain containing 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CUEDC1, Length 2,193 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1-201ENST00000360238 DDX55Q8NHQ9 600 aaKnown RBP eCLIP28.15■■■□□ 2.1
CUEDC1-201ENST00000360238 MSTO1Q9BUK6 570 aa28.15■■■□□ 2.1
CUEDC1-201ENST00000360238 CNOT10Q9H9A5 744 aaKnown RBP28.15■■■□□ 2.1
CUEDC1-201ENST00000360238 PPP1R1BQ9UD71 204 aaPredicted RBP28.15■■■□□ 2.1
CUEDC1-201ENST00000360238 SBDSQ9Y3A5 250 aaKnown RBP eCLIP28.15■■■□□ 2.1
CUEDC1-201ENST00000360238 A0A0B4J269 797 aa28.14■■■□□ 2.1
CUEDC1-201ENST00000360238 SLC20A2Q08357 652 aa28.14■■■□□ 2.1
CUEDC1-201ENST00000360238 PPP1R2P3Q6NXS1 205 aa28.14■■■□□ 2.1
CUEDC1-201ENST00000360238 CPA5Q8WXQ8 436 aa28.14■■■□□ 2.1
CUEDC1-201ENST00000360238 PGM2Q96G03 612 aa28.14■■■□□ 2.1
CUEDC1-201ENST00000360238 CCT8L2Q96SF2 557 aa28.14■■■□□ 2.1
CUEDC1-201ENST00000360238 FBXO40Q9UH90 709 aa28.14■■■□□ 2.1
CUEDC1-201ENST00000360238 ADGRA2Q96PE1 1338 aa28.14■■■□□ 2.1
CUEDC1-201ENST00000360238 TBXAS1P24557 533 aaPredicted RBP28.14■■■□□ 2.09
CUEDC1-201ENST00000360238 MAN1A1P33908 653 aa28.14■■■□□ 2.09
CUEDC1-201ENST00000360238 CNTN2Q02246 1040 aa28.14■■■□□ 2.09
CUEDC1-201ENST00000360238 PTP4A2Q12974 167 aa28.14■■■□□ 2.09
CUEDC1-201ENST00000360238 SGO2Q562F6 1265 aa28.14■■■□□ 2.09
CUEDC1-201ENST00000360238 RNF25Q96BH1 459 aaPredicted RBP28.14■■■□□ 2.09
CUEDC1-201ENST00000360238 CNTN6Q9UQ52 1028 aa28.14■■■□□ 2.09
CUEDC1-201ENST00000360238 UBA1P22314 1058 aaKnown RBP28.13■■■□□ 2.09
CUEDC1-201ENST00000360238 CDR1P51861 262 aa28.13■■■□□ 2.09
CUEDC1-201ENST00000360238 BYSLQ13895 437 aaKnown RBP28.13■■■□□ 2.09
CUEDC1-201ENST00000360238 SPOPLQ6IQ16 392 aa28.13■■■□□ 2.09
CUEDC1-201ENST00000360238 SEPT14Q6ZU15 432 aa28.13■■■□□ 2.09
CUEDC1-201ENST00000360238 PPM1EQ8WY54 764 aa28.13■■■□□ 2.09
CUEDC1-201ENST00000360238 PTPN22Q9Y2R2 807 aa28.13■■■□□ 2.09
CUEDC1-201ENST00000360238 A0A087WUV0 522 aaPredicted RBP28.13■■■□□ 2.09
CUEDC1-201ENST00000360238 E7EVH7 732 aa28.13■■■□□ 2.09
CUEDC1-201ENST00000360238 SHBGP04278 402 aa28.13■■■□□ 2.09
CUEDC1-201ENST00000360238 LIN9Q5TKA1 542 aa28.13■■■□□ 2.09
CUEDC1-201ENST00000360238 VCPIP1Q96JH7 1222 aa28.13■■■□□ 2.09
CUEDC1-201ENST00000360238 ZBTB45Q96K62 511 aaPredicted RBP28.13■■■□□ 2.09
CUEDC1-201ENST00000360238 TARS2Q9BW92 718 aaKnown RBP28.13■■■□□ 2.09
CUEDC1-201ENST00000360238 APOBEC3GQ9HC16 384 aaKnown RBP28.13■■■□□ 2.09
CUEDC1-201ENST00000360238 ANKFY1Q9P2R3 1169 aa28.13■■■□□ 2.09
CUEDC1-201ENST00000360238 PAPPA2Q9BXP8 1791 aa28.12■■■□□ 2.09
CUEDC1-201ENST00000360238 DCDC2CA8MYV0 355 aa28.12■■■□□ 2.09
CUEDC1-201ENST00000360238 CLTAP09496 248 aa28.12■■■□□ 2.09
CUEDC1-201ENST00000360238 RARGP13631 454 aa28.12■■■□□ 2.09
CUEDC1-201ENST00000360238 SEC24CP53992 1094 aa28.12■■■□□ 2.09
CUEDC1-201ENST00000360238 TARBP2Q15633 366 aaKnown RBP28.12■■■□□ 2.09
CUEDC1-201ENST00000360238 LBX2Q6XYB7 198 aa28.12■■■□□ 2.09
CUEDC1-201ENST00000360238 SYDE1Q6ZW31 735 aaPredicted RBP28.12■■■□□ 2.09
CUEDC1-201ENST00000360238 MICALCLQ6ZW33 695 aa28.12■■■□□ 2.09
CUEDC1-201ENST00000360238 TMEM109Q9BVC6 243 aa28.12■■■□□ 2.09
CUEDC1-201ENST00000360238 LRRC4CQ9HCJ2 640 aa28.12■■■□□ 2.09
CUEDC1-201ENST00000360238 GPRC5DQ9NZD1 345 aa28.12■■■□□ 2.09
CUEDC1-201ENST00000360238 WHRNQ9P202 907 aa28.12■■■□□ 2.09
CUEDC1-201ENST00000360238 GGA2Q9UJY4 613 aa28.12■■■□□ 2.09
CUEDC1-201ENST00000360238 ANKRD65E5RJM6 399 aa28.11■■■□□ 2.09
CUEDC1-201ENST00000360238 TRAPPC3O43617 180 aa28.11■■■□□ 2.09
CUEDC1-201ENST00000360238 CAND2O75155 1236 aa28.11■■■□□ 2.09
CUEDC1-201ENST00000360238 FARP2O94887 1054 aaPredicted RBP28.11■■■□□ 2.09
CUEDC1-201ENST00000360238 PROSCO94903 275 aa28.11■■■□□ 2.09
CUEDC1-201ENST00000360238 POTEJP0CG39 1038 aa28.11■■■□□ 2.09
CUEDC1-201ENST00000360238 FSTL1Q12841 308 aa28.11■■■□□ 2.09
CUEDC1-201ENST00000360238 PPP1R7Q15435 360 aa28.11■■■□□ 2.09
CUEDC1-201ENST00000360238 ABRAQ8N0Z2 381 aa28.11■■■□□ 2.09
CUEDC1-201ENST00000360238 CYFIP2Q96F07 1278 aa28.11■■■□□ 2.09
CUEDC1-201ENST00000360238 TRIM7Q9C029 511 aa28.11■■■□□ 2.09
CUEDC1-201ENST00000360238 NRBP2Q9NSY0 501 aa28.11■■■□□ 2.09
CUEDC1-201ENST00000360238 PCDHB4Q9Y5E5 795 aa28.11■■■□□ 2.09
CUEDC1-201ENST00000360238 CNTNAP2Q9UHC6 1331 aa28.11■■■□□ 2.09
CUEDC1-201ENST00000360238 POLR2AP24928 1970 aaKnown RBP28.11■■■□□ 2.09
CUEDC1-201ENST00000360238 EDNRBP24530 442 aa28.11■■■□□ 2.09
CUEDC1-201ENST00000360238 GNA15P30679 374 aa28.11■■■□□ 2.09
CUEDC1-201ENST00000360238 KCNJ1P48048 391 aa28.11■■■□□ 2.09
CUEDC1-201ENST00000360238 NOMO3P69849 1222 aa28.11■■■□□ 2.09
CUEDC1-201ENST00000360238 CALCOCO2Q13137 446 aa28.11■■■□□ 2.09
CUEDC1-201ENST00000360238 DDX27Q96GQ7 796 aaKnown RBP28.11■■■□□ 2.09
CUEDC1-201ENST00000360238 CD2APQ9Y5K6 639 aa28.11■■■□□ 2.09
CUEDC1-201ENST00000360238 GSTTP1A0A1W2PQM5 241 aa28.1■■■□□ 2.09
CUEDC1-201ENST00000360238 PSTPIP1O43586 416 aa28.1■■■□□ 2.09
CUEDC1-201ENST00000360238 NOP14P78316 857 aaKnown RBP28.1■■■□□ 2.09
CUEDC1-201ENST00000360238 ADCY2Q08462 1091 aa28.1■■■□□ 2.09
CUEDC1-201ENST00000360238 SLC29A2Q14542 456 aa28.1■■■□□ 2.09
CUEDC1-201ENST00000360238 UMODL1Q5DID0 1318 aa28.1■■■□□ 2.09
CUEDC1-201ENST00000360238 ZBTB41Q5SVQ8 909 aa28.1■■■□□ 2.09
CUEDC1-201ENST00000360238 DHX30Q7L2E3 1194 aaKnown RBP eCLIP28.1■■■□□ 2.09
CUEDC1-201ENST00000360238 PHF13Q86YI8 300 aaPredicted RBP28.1■■■□□ 2.09
CUEDC1-201ENST00000360238 RIOX2Q8IUF8 465 aa28.1■■■□□ 2.09
CUEDC1-201ENST00000360238 PCYT2Q99447 389 aa28.1■■■□□ 2.09
CUEDC1-201ENST00000360238 SEMA4AQ9H3S1 761 aa28.1■■■□□ 2.09
CUEDC1-201ENST00000360238 MRPL47Q9HD33 250 aaKnown RBP28.1■■■□□ 2.09
CUEDC1-201ENST00000360238 PPANQ9NQ55 473 aaKnown RBP28.1■■■□□ 2.09
CUEDC1-201ENST00000360238 PPME1Q9Y570 386 aa28.1■■■□□ 2.09
CUEDC1-201ENST00000360238 OTOFQ9HC10 1997 aa28.1■■■□□ 2.09
CUEDC1-201ENST00000360238 GMNCA6NCL1 334 aa28.1■■■□□ 2.09
CUEDC1-201ENST00000360238 ADCY3O60266 1144 aa28.1■■■□□ 2.09
CUEDC1-201ENST00000360238 KRT17Q04695 432 aa28.1■■■□□ 2.09
CUEDC1-201ENST00000360238 CAPSQ13938 189 aa28.1■■■□□ 2.09
CUEDC1-201ENST00000360238 FAM160B1Q5W0V3 765 aa28.1■■■□□ 2.09
CUEDC1-201ENST00000360238 TMEM270Q6UE05 265 aa28.1■■■□□ 2.09
CUEDC1-201ENST00000360238 TADA2BQ86TJ2 420 aa28.1■■■□□ 2.09
CUEDC1-201ENST00000360238 EDN1P05305 212 aa28.09■■■□□ 2.09
CUEDC1-201ENST00000360238 ZPBP2Q6X784 338 aa28.09■■■□□ 2.09
CUEDC1-201ENST00000360238 RBBP8NLQ8NC74 664 aaPredicted RBP28.09■■■□□ 2.09
CUEDC1-201ENST00000360238 GRK7Q8WTQ7 553 aa28.09■■■□□ 2.09
CUEDC1-201ENST00000360238 SNCAIPQ9Y6H5 919 aa28.09■■■□□ 2.09
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms