RNA–Protein interactions for RNA: ENST00000357732.8

RTN4-204, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 2,390 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-204ENST00000357732 RGS9BPQ6ZS82 235 aa18.84■□□□□ 0.61
RTN4-204ENST00000357732 ZNF365Q70YC5 407 aa18.84■□□□□ 0.61
RTN4-204ENST00000357732 TDRPQ86YL5 185 aa18.84■□□□□ 0.61
RTN4-204ENST00000357732 CPNE8Q86YQ8 564 aa18.84■□□□□ 0.61
RTN4-204ENST00000357732 TBC1D31Q96DN5 1066 aa18.84■□□□□ 0.61
RTN4-204ENST00000357732 TTC25Q96NG3 672 aa18.84■□□□□ 0.61
RTN4-204ENST00000357732 SENP1Q9P0U3 644 aa18.84■□□□□ 0.61
RTN4-204ENST00000357732 ZBTB21Q9ULJ3 1066 aa18.84■□□□□ 0.61
RTN4-204ENST00000357732 PCDHB2Q9Y5E7 798 aa18.84■□□□□ 0.61
RTN4-204ENST00000357732 MROH7Q68CQ1 1323 aa18.84■□□□□ 0.61
RTN4-204ENST00000357732 DDX39AO00148 427 aaKnown RBP18.84■□□□□ 0.61
RTN4-204ENST00000357732 SLC16A4O15374 487 aa18.84■□□□□ 0.61
RTN4-204ENST00000357732 ICAM1P05362 532 aa18.84■□□□□ 0.61
RTN4-204ENST00000357732 CNGA1P29973 690 aa18.84■□□□□ 0.61
RTN4-204ENST00000357732 ADSSP30520 456 aa18.84■□□□□ 0.61
RTN4-204ENST00000357732 SFNP31947 248 aa18.84■□□□□ 0.61
RTN4-204ENST00000357732 JAK3P52333 1124 aa18.84■□□□□ 0.61
RTN4-204ENST00000357732 KCNJ2P63252 427 aa18.84■□□□□ 0.61
RTN4-204ENST00000357732 NSMFQ6X4W1 530 aa18.84■□□□□ 0.61
RTN4-204ENST00000357732 TRIM72Q6ZMU5 477 aa18.84■□□□□ 0.61
RTN4-204ENST00000357732 ANKRD42Q8N9B4 389 aa18.84■□□□□ 0.61
RTN4-204ENST00000357732 TMEM161BQ8NDZ6 487 aa18.84■□□□□ 0.61
RTN4-204ENST00000357732 SPIRE2Q8WWL2 714 aa18.84■□□□□ 0.61
RTN4-204ENST00000357732 VCPIP1Q96JH7 1222 aa18.84■□□□□ 0.61
RTN4-204ENST00000357732 TXLNGQ9NUQ3 528 aa18.84■□□□□ 0.61
RTN4-204ENST00000357732 SUFUQ9UMX1 484 aa18.84■□□□□ 0.61
RTN4-204ENST00000357732 CLRN2A0PK11 232 aa18.83■□□□□ 0.61
RTN4-204ENST00000357732 PROSCO94903 275 aa18.83■□□□□ 0.61
RTN4-204ENST00000357732 ANP32DO95626 131 aa18.83■□□□□ 0.61
RTN4-204ENST00000357732 MSH2P43246 934 aa18.83■□□□□ 0.61
RTN4-204ENST00000357732 CCNG1P51959 295 aa18.83■□□□□ 0.61
RTN4-204ENST00000357732 PSMC5P62195 406 aa18.83■□□□□ 0.61
RTN4-204ENST00000357732 SNX1Q13596 522 aa18.83■□□□□ 0.61
RTN4-204ENST00000357732 TKFCQ3LXA3 575 aa18.83■□□□□ 0.61
RTN4-204ENST00000357732 SPDYAQ5MJ70 313 aa18.83■□□□□ 0.61
RTN4-204ENST00000357732 RHOT1Q8IXI2 618 aa18.83■□□□□ 0.61
RTN4-204ENST00000357732 KATNAL2Q8IYT4 538 aa18.83■□□□□ 0.61
RTN4-204ENST00000357732 ZCCHC9Q8N567 271 aaKnown RBP18.83■□□□□ 0.61
RTN4-204ENST00000357732 FITM2Q8N6M3 262 aa18.83■□□□□ 0.61
RTN4-204ENST00000357732 GADD45GIP1Q8TAE8 222 aaPredicted RBP18.83■□□□□ 0.61
RTN4-204ENST00000357732 AGAP11Q8TF27 550 aa18.83■□□□□ 0.61
RTN4-204ENST00000357732 CFAP57Q96MR6 1250 aa18.83■□□□□ 0.61
RTN4-204ENST00000357732 NTPCRQ9BSD7 190 aaKnown RBP18.83■□□□□ 0.61
RTN4-204ENST00000357732 ACP6Q9NPH0 428 aa18.83■□□□□ 0.61
RTN4-204ENST00000357732 NAALADL1Q9UQQ1 740 aa18.83■□□□□ 0.61
RTN4-204ENST00000357732 STARD13Q9Y3M8 1113 aa18.83■□□□□ 0.61
RTN4-204ENST00000357732 FAM47DPA6NHR8 397 aa18.83■□□□□ 0.6
RTN4-204ENST00000357732 UNC5CO95185 931 aa18.83■□□□□ 0.6
RTN4-204ENST00000357732 ATP11AP98196 1134 aa18.83■□□□□ 0.6
RTN4-204ENST00000357732 DMP1Q13316 513 aaPredicted RBP18.83■□□□□ 0.6
RTN4-204ENST00000357732 GRIPAP1Q4V328 841 aa18.83■□□□□ 0.6
RTN4-204ENST00000357732 RDM1Q8NG50 284 aa18.83■□□□□ 0.6
RTN4-204ENST00000357732 TAS1R2Q8TE23 839 aa18.83■□□□□ 0.6
RTN4-204ENST00000357732 STAMBPL1Q96FJ0 436 aa18.83■□□□□ 0.6
RTN4-204ENST00000357732 MRPL47Q9HD33 250 aaKnown RBP18.83■□□□□ 0.6
RTN4-204ENST00000357732 PKD2L1Q9P0L9 805 aa18.83■□□□□ 0.6
RTN4-204ENST00000357732 ASTN2O75129 1339 aaPredicted RBP18.82■□□□□ 0.6
RTN4-204ENST00000357732 YDJCA8MPS7 323 aa18.82■□□□□ 0.6
RTN4-204ENST00000357732 CREB1P16220 341 aa18.82■□□□□ 0.6
RTN4-204ENST00000357732 CHRNA5P30532 468 aa18.82■□□□□ 0.6
RTN4-204ENST00000357732 CETN2P41208 172 aa18.82■□□□□ 0.6
RTN4-204ENST00000357732 CYP24A1Q07973 514 aa18.82■□□□□ 0.6
RTN4-204ENST00000357732 RASA2Q15283 850 aa18.82■□□□□ 0.6
RTN4-204ENST00000357732 PARP6Q2NL67 630 aa18.82■□□□□ 0.6
RTN4-204ENST00000357732 ZSWIM2Q8NEG5 633 aa18.82■□□□□ 0.6
RTN4-204ENST00000357732 NSMCE1Q8WV22 266 aa18.82■□□□□ 0.6
RTN4-204ENST00000357732 FBXO28Q9NVF7 368 aa18.82■□□□□ 0.6
RTN4-204ENST00000357732 CTNNAL1Q9UBT7 734 aa18.82■□□□□ 0.6
RTN4-204ENST00000357732 GOLGA8IPA6NC78 632 aa18.82■□□□□ 0.6
RTN4-204ENST00000357732 GOLGA8JA6NMD2 632 aa18.82■□□□□ 0.6
RTN4-204ENST00000357732 H0YIN7 160 aa18.82■□□□□ 0.6
RTN4-204ENST00000357732 PRPF4O43172 522 aaKnown RBP eCLIP18.82■□□□□ 0.6
RTN4-204ENST00000357732 CYP1A1P04798 512 aaPredicted RBP18.82■□□□□ 0.6
RTN4-204ENST00000357732 GARTP22102 1010 aa18.82■□□□□ 0.6
RTN4-204ENST00000357732 MPP2Q14168 576 aa18.82■□□□□ 0.6
RTN4-204ENST00000357732 LIN9Q5TKA1 542 aa18.82■□□□□ 0.6
RTN4-204ENST00000357732 DRICH1Q6PGQ1 229 aaPredicted RBP18.82■□□□□ 0.6
RTN4-204ENST00000357732 SV2AQ7L0J3 742 aa18.82■□□□□ 0.6
RTN4-204ENST00000357732 EXD1Q8NHP7 514 aa18.82■□□□□ 0.6
RTN4-204ENST00000357732 CCDC127Q96BQ5 260 aa18.82■□□□□ 0.6
RTN4-204ENST00000357732 C1orf112Q9NSG2 853 aa18.82■□□□□ 0.6
RTN4-204ENST00000357732 NFASCO94856 1347 aa18.81■□□□□ 0.6
RTN4-204ENST00000357732 MYPNQ86TC9 1320 aa18.81■□□□□ 0.6
RTN4-204ENST00000357732 KRT5P13647 590 aa18.81■□□□□ 0.6
RTN4-204ENST00000357732 TAC1P20366 129 aa18.81■□□□□ 0.6
RTN4-204ENST00000357732 PTGER2P43116 358 aa18.81■□□□□ 0.6
RTN4-204ENST00000357732 NSFP46459 744 aaKnown RBP18.81■□□□□ 0.6
RTN4-204ENST00000357732 YARSP54577 528 aaKnown RBP18.81■□□□□ 0.6
RTN4-204ENST00000357732 MYO1EQ12965 1108 aa18.81■□□□□ 0.6
RTN4-204ENST00000357732 MTMR1Q13613 665 aa18.81■□□□□ 0.6
RTN4-204ENST00000357732 OGFOD1Q8N543 542 aa18.81■□□□□ 0.6
RTN4-204ENST00000357732 FAM151AQ8WW52 585 aa18.81■□□□□ 0.6
RTN4-204ENST00000357732 ATG4AQ8WYN0 398 aa18.81■□□□□ 0.6
RTN4-204ENST00000357732 PITPNM3Q9BZ71 974 aa18.81■□□□□ 0.6
RTN4-204ENST00000357732 SMG5Q9UPR3 1016 aaKnown RBP18.81■□□□□ 0.6
RTN4-204ENST00000357732 KRT16P08779 473 aa18.81■□□□□ 0.6
RTN4-204ENST00000357732 SETDB1Q15047 1291 aa18.81■□□□□ 0.6
RTN4-204ENST00000357732 IZUMO3Q5VZ72 239 aa18.81■□□□□ 0.6
RTN4-204ENST00000357732 STYK1Q6J9G0 422 aa18.81■□□□□ 0.6
RTN4-204ENST00000357732 ANKS1BQ7Z6G8 1248 aa18.81■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms