RNA–Protein interactions for RNA: ENST00000347559.6

LMNA-201, Transcript of lamin A/C, humanhuman

TSL 5 BASIC

Gene LMNA, Length 3,137 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-201ENST00000347559 R3HDM2Q9Y2K5 976 aaKnown RBP16.28■□□□□ 0.2
LMNA-201ENST00000347559 GOLGA8RI6L899 631 aa16.28■□□□□ 0.2
LMNA-201ENST00000347559 USP1O94782 785 aa16.28■□□□□ 0.2
LMNA-201ENST00000347559 NTSR2O95665 410 aa16.28■□□□□ 0.2
LMNA-201ENST00000347559 INHBCP55103 352 aa16.28■□□□□ 0.2
LMNA-201ENST00000347559 LCA5Q86VQ0 697 aa16.28■□□□□ 0.2
LMNA-201ENST00000347559 MYCT1Q8N699 235 aa16.28■□□□□ 0.2
LMNA-201ENST00000347559 SYT2Q8N9I0 419 aaPredicted RBP16.28■□□□□ 0.2
LMNA-201ENST00000347559 CFAP61Q8NHU2 1237 aa16.28■□□□□ 0.2
LMNA-201ENST00000347559 FNBP1Q96RU3 617 aa16.28■□□□□ 0.2
LMNA-201ENST00000347559 PCDHB18PQ96TA0 734 aa16.28■□□□□ 0.2
LMNA-201ENST00000347559 RIOX1Q9H6W3 641 aa16.28■□□□□ 0.2
LMNA-201ENST00000347559 PSTPIP2Q9H939 334 aa16.28■□□□□ 0.2
LMNA-201ENST00000347559 ARMCX1Q9P291 453 aa16.28■□□□□ 0.2
LMNA-201ENST00000347559 COL18A1P39060 1754 aa16.27■□□□□ 0.2
LMNA-201ENST00000347559 IMPDH2P12268 514 aa16.27■□□□□ 0.2
LMNA-201ENST00000347559 ADRA1DP25100 572 aa16.27■□□□□ 0.2
LMNA-201ENST00000347559 POLD1P28340 1107 aa16.27■□□□□ 0.2
LMNA-201ENST00000347559 CCDC62Q6P9F0 684 aa16.27■□□□□ 0.2
LMNA-201ENST00000347559 KAT5Q92993 513 aa16.27■□□□□ 0.2
LMNA-201ENST00000347559 CD101Q93033 1021 aa16.27■□□□□ 0.2
LMNA-201ENST00000347559 AZIN2Q96A70 460 aa16.27■□□□□ 0.2
LMNA-201ENST00000347559 PLEKHG4BQ96PX9 1271 aa16.27■□□□□ 0.2
LMNA-201ENST00000347559 KLF6Q99612 283 aaPredicted RBP16.27■□□□□ 0.2
LMNA-201ENST00000347559 HERPUD2Q9BSE4 406 aa16.27■□□□□ 0.2
LMNA-201ENST00000347559 ANKFY1Q9P2R3 1169 aa16.27■□□□□ 0.2
LMNA-201ENST00000347559 ZNF212Q9UDV6 495 aa16.27■□□□□ 0.2
LMNA-201ENST00000347559 NUP98P52948 1817 aa16.27■□□□□ 0.2
LMNA-201ENST00000347559 SGPL1O95470 568 aa16.27■□□□□ 0.19
LMNA-201ENST00000347559 GJC1P36383 396 aa16.27■□□□□ 0.19
LMNA-201ENST00000347559 LARP7Q4G0J3 582 aaKnown RBP eCLIP16.27■□□□□ 0.19
LMNA-201ENST00000347559 PRR16Q569H4 304 aa16.27■□□□□ 0.19
LMNA-201ENST00000347559 MDH1BQ5I0G3 518 aa16.27■□□□□ 0.19
LMNA-201ENST00000347559 ACBD5Q5T8D3 534 aaPredicted RBP16.27■□□□□ 0.19
LMNA-201ENST00000347559 OLFML2BQ68BL8 750 aa16.27■□□□□ 0.19
LMNA-201ENST00000347559 TTC7BQ86TV6 843 aa16.27■□□□□ 0.19
LMNA-201ENST00000347559 RIBC1Q8N443 379 aaPredicted RBP16.27■□□□□ 0.19
LMNA-201ENST00000347559 LRRC4BQ9NT99 713 aa16.27■□□□□ 0.19
LMNA-201ENST00000347559 CHMP2BQ9UQN3 213 aa16.27■□□□□ 0.19
LMNA-201ENST00000347559 FRMD4BQ9Y2L6 1034 aa16.27■□□□□ 0.19
LMNA-201ENST00000347559 COL4A1P02462 1669 aa16.26■□□□□ 0.19
LMNA-201ENST00000347559 ZMYM2Q9UBW7 1377 aa16.26■□□□□ 0.19
LMNA-201ENST00000347559 BCRP11274 1271 aa16.26■□□□□ 0.19
LMNA-201ENST00000347559 MUTP22033 750 aa16.26■□□□□ 0.19
LMNA-201ENST00000347559 DSG1Q02413 1049 aa16.26■□□□□ 0.19
LMNA-201ENST00000347559 PTK6Q13882 451 aa16.26■□□□□ 0.19
LMNA-201ENST00000347559 KIF22Q14807 665 aa16.26■□□□□ 0.19
LMNA-201ENST00000347559 DAB2IPQ5VWQ8 1189 aa16.26■□□□□ 0.19
LMNA-201ENST00000347559 TTBK2Q6IQ55 1244 aa16.26■□□□□ 0.19
LMNA-201ENST00000347559 ARHGEF19Q8IW93 802 aa16.26■□□□□ 0.19
LMNA-201ENST00000347559 C12orf50Q8NA57 414 aaPredicted RBP16.26■□□□□ 0.19
LMNA-201ENST00000347559 KANSL3Q9P2N6 904 aa16.26■□□□□ 0.19
LMNA-201ENST00000347559 MYO3BQ8WXR4 1341 aa16.26■□□□□ 0.19
LMNA-201ENST00000347559 PPP1R11O60927 126 aaPredicted RBP16.26■□□□□ 0.19
LMNA-201ENST00000347559 LDHBP07195 334 aaKnown RBP16.26■□□□□ 0.19
LMNA-201ENST00000347559 SETSIPP0DME0 302 aa16.26■□□□□ 0.19
LMNA-201ENST00000347559 KRT4P19013 534 aa16.26■□□□□ 0.19
LMNA-201ENST00000347559 RXRBP28702 533 aa16.26■□□□□ 0.19
LMNA-201ENST00000347559 EAPPQ56P03 285 aaPredicted RBP16.26■□□□□ 0.19
LMNA-201ENST00000347559 SLC25A41Q8N5S1 370 aa16.26■□□□□ 0.19
LMNA-201ENST00000347559 NR1H4Q96RI1 486 aaPredicted RBP16.26■□□□□ 0.19
LMNA-201ENST00000347559 PLVAPQ9BX97 442 aa16.26■□□□□ 0.19
LMNA-201ENST00000347559 ANGPTL2Q9UKU9 493 aa16.26■□□□□ 0.19
LMNA-201ENST00000347559 ATAD5Q96QE3 1844 aa16.26■□□□□ 0.19
LMNA-201ENST00000347559 ATP6V1G1O75348 118 aa16.25■□□□□ 0.19
LMNA-201ENST00000347559 FAM13AO94988 1023 aa16.25■□□□□ 0.19
LMNA-201ENST00000347559 ARFIP2P53365 341 aa16.25■□□□□ 0.19
LMNA-201ENST00000347559 HADHBP55084 474 aaKnown RBP16.25■□□□□ 0.19
LMNA-201ENST00000347559 FASTKD3Q14CZ7 662 aaKnown RBP16.25■□□□□ 0.19
LMNA-201ENST00000347559 GSTA3Q16772 222 aa16.25■□□□□ 0.19
LMNA-201ENST00000347559 ERFEQ4G0M1 354 aa16.25■□□□□ 0.19
LMNA-201ENST00000347559 PCNX4Q63HM2 1172 aa16.25■□□□□ 0.19
LMNA-201ENST00000347559 ZNF804AQ7Z570 1209 aa16.25■□□□□ 0.19
LMNA-201ENST00000347559 ST13P4Q8IZP2 240 aaPredicted RBP16.25■□□□□ 0.19
LMNA-201ENST00000347559 NEDD1Q8NHV4 660 aa16.25■□□□□ 0.19
LMNA-201ENST00000347559 DNAJC1Q96KC8 554 aaKnown RBP16.25■□□□□ 0.19
LMNA-201ENST00000347559 ZNF287Q9HBT7 754 aa16.25■□□□□ 0.19
LMNA-201ENST00000347559 CLIC5Q9NZA1 410 aa16.25■□□□□ 0.19
LMNA-201ENST00000347559 SMG5Q9UPR3 1016 aaKnown RBP16.25■□□□□ 0.19
LMNA-201ENST00000347559 FRMPD4Q14CM0 1322 aa16.25■□□□□ 0.19
LMNA-201ENST00000347559 ANKRD36CQ5JPF3 1778 aa16.25■□□□□ 0.19
LMNA-201ENST00000347559 ROBO3Q96MS0 1386 aa16.25■□□□□ 0.19
LMNA-201ENST00000347559 FSCN2O14926 492 aa16.25■□□□□ 0.19
LMNA-201ENST00000347559 HNRNPCL1O60812 293 aaKnown RBP16.25■□□□□ 0.19
LMNA-201ENST00000347559 CDK7P50613 346 aa16.25■□□□□ 0.19
LMNA-201ENST00000347559 NR1H3Q13133 447 aa16.25■□□□□ 0.19
LMNA-201ENST00000347559 GRIK5Q16478 980 aa16.25■□□□□ 0.19
LMNA-201ENST00000347559 ISLR2Q6UXK2 745 aa16.25■□□□□ 0.19
LMNA-201ENST00000347559 SPATA24Q86W54 205 aa16.25■□□□□ 0.19
LMNA-201ENST00000347559 LRRC6Q86X45 466 aa16.25■□□□□ 0.19
LMNA-201ENST00000347559 CLPTM1LQ96KA5 538 aa16.25■□□□□ 0.19
LMNA-201ENST00000347559 CFAP57Q96MR6 1250 aa16.25■□□□□ 0.19
LMNA-201ENST00000347559 UMODL1Q5DID0 1318 aa16.25■□□□□ 0.19
LMNA-201ENST00000347559 RNASEH1O60930 286 aaKnown RBP16.25■□□□□ 0.19
LMNA-201ENST00000347559 GCAP28676 217 aa16.25■□□□□ 0.19
LMNA-201ENST00000347559 CAV1Q03135 178 aa16.25■□□□□ 0.19
LMNA-201ENST00000347559 LSAMPQ13449 338 aa16.25■□□□□ 0.19
LMNA-201ENST00000347559 DBN1Q16643 649 aa16.25■□□□□ 0.19
LMNA-201ENST00000347559 P3H1Q32P28 736 aa16.25■□□□□ 0.19
LMNA-201ENST00000347559 PARP10Q53GL7 1025 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms