RNA–Protein interactions for RNA: ENST00000342245.8

SMPD1-201, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMPD1, Length 2,452 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-201ENST00000342245 HARSP12081 509 aaKnown RBP19.62■□□□□ 0.73
SMPD1-201ENST00000342245 ACTR3P61158 418 aa19.62■□□□□ 0.73
SMPD1-201ENST00000342245 TNIP1Q15025 636 aa19.62■□□□□ 0.73
SMPD1-201ENST00000342245 BRINP3Q76B58 766 aa19.62■□□□□ 0.73
SMPD1-201ENST00000342245 ZBED8Q8IZ13 594 aa19.62■□□□□ 0.73
SMPD1-201ENST00000342245 LARGE2Q8N3Y3 721 aa19.62■□□□□ 0.73
SMPD1-201ENST00000342245 ARHGEF26Q96DR7 871 aa19.62■□□□□ 0.73
SMPD1-201ENST00000342245 SYT11Q9BT88 431 aa19.62■□□□□ 0.73
SMPD1-201ENST00000342245 FAIMQ9NVQ4 179 aa19.62■□□□□ 0.73
SMPD1-201ENST00000342245 PLK2Q9NYY3 685 aa19.62■□□□□ 0.73
SMPD1-201ENST00000342245 HEY2Q9UBP5 337 aa19.62■□□□□ 0.73
SMPD1-201ENST00000342245 BAZ2BQ9UIF8 2168 aaKnown RBP19.62■□□□□ 0.73
SMPD1-201ENST00000342245 CALUO43852 315 aaPredicted RBP19.62■□□□□ 0.73
SMPD1-201ENST00000342245 CDK4P11802 303 aa19.62■□□□□ 0.73
SMPD1-201ENST00000342245 PORP16435 677 aaPredicted RBP19.62■□□□□ 0.73
SMPD1-201ENST00000342245 GRIA2P42262 883 aa19.62■□□□□ 0.73
SMPD1-201ENST00000342245 CHN2P52757 468 aa19.62■□□□□ 0.73
SMPD1-201ENST00000342245 HSPA2P54652 639 aa19.62■□□□□ 0.73
SMPD1-201ENST00000342245 EMP3P54852 163 aa19.62■□□□□ 0.73
SMPD1-201ENST00000342245 IRX4P78413 519 aa19.62■□□□□ 0.73
SMPD1-201ENST00000342245 SIX1Q15475 284 aaPredicted RBP19.62■□□□□ 0.73
SMPD1-201ENST00000342245 OLIG1Q8TAK6 271 aa19.62■□□□□ 0.73
SMPD1-201ENST00000342245 SKA1Q96BD8 255 aa19.62■□□□□ 0.73
SMPD1-201ENST00000342245 ZFRQ96KR1 1074 aaKnown RBP19.62■□□□□ 0.73
SMPD1-201ENST00000342245 PRICKLE1Q96MT3 831 aaPredicted RBP19.62■□□□□ 0.73
SMPD1-201ENST00000342245 GCNT4Q9P109 453 aa19.62■□□□□ 0.73
SMPD1-201ENST00000342245 ERVV-2B6SEH9 535 aa19.61■□□□□ 0.73
SMPD1-201ENST00000342245 SPAG7O75391 227 aa19.61■□□□□ 0.73
SMPD1-201ENST00000342245 TGDSO95455 350 aa19.61■□□□□ 0.73
SMPD1-201ENST00000342245 ATF2P15336 505 aa19.61■□□□□ 0.73
SMPD1-201ENST00000342245 ITGA8P53708 1063 aa19.61■□□□□ 0.73
SMPD1-201ENST00000342245 CDK16Q00536 496 aa19.61■□□□□ 0.73
SMPD1-201ENST00000342245 GSTM4Q03013 218 aa19.61■□□□□ 0.73
SMPD1-201ENST00000342245 ZBTB16Q05516 673 aa19.61■□□□□ 0.73
SMPD1-201ENST00000342245 RASA2Q15283 850 aa19.61■□□□□ 0.73
SMPD1-201ENST00000342245 AADACL2Q6P093 401 aa19.61■□□□□ 0.73
SMPD1-201ENST00000342245 GAB3Q8WWW8 586 aa19.61■□□□□ 0.73
SMPD1-201ENST00000342245 FAM161BQ96MY7 647 aa19.61■□□□□ 0.73
SMPD1-201ENST00000342245 THAP2Q9H0W7 228 aa19.61■□□□□ 0.73
SMPD1-201ENST00000342245 EBF3Q9H4W6 596 aa19.61■□□□□ 0.73
SMPD1-201ENST00000342245 STK24Q9Y6E0 443 aa19.61■□□□□ 0.73
SMPD1-201ENST00000342245 KDM3AQ9Y4C1 1321 aa19.61■□□□□ 0.73
SMPD1-201ENST00000342245 KCPQ6ZWJ8 1503 aa19.61■□□□□ 0.73
SMPD1-201ENST00000342245 CA4P22748 312 aa19.61■□□□□ 0.73
SMPD1-201ENST00000342245 ARFIP2P53365 341 aa19.61■□□□□ 0.73
SMPD1-201ENST00000342245 PLCB3Q01970 1234 aa19.61■□□□□ 0.73
SMPD1-201ENST00000342245 ADCY1Q08828 1119 aa19.61■□□□□ 0.73
SMPD1-201ENST00000342245 DNAL1Q4LDG9 190 aa19.61■□□□□ 0.73
SMPD1-201ENST00000342245 SH3RF3Q8TEJ3 882 aaPredicted RBP19.61■□□□□ 0.73
SMPD1-201ENST00000342245 SPIRE2Q8WWL2 714 aa19.61■□□□□ 0.73
SMPD1-201ENST00000342245 KRT35Q92764 455 aa19.61■□□□□ 0.73
SMPD1-201ENST00000342245 ARHGEF1Q92888 912 aaKnown RBP19.61■□□□□ 0.73
SMPD1-201ENST00000342245 TSPYL2Q9H2G4 693 aaPredicted RBP19.61■□□□□ 0.73
SMPD1-201ENST00000342245 C17orf75Q9HAS0 396 aa19.61■□□□□ 0.73
SMPD1-201ENST00000342245 COG5Q9UP83 839 aa19.61■□□□□ 0.73
SMPD1-201ENST00000342245 DMTF1Q9Y222 760 aa19.61■□□□□ 0.73
SMPD1-201ENST00000342245 TSPY2A6NKD2 308 aa19.6■□□□□ 0.73
SMPD1-201ENST00000342245 VILLO15195 856 aa19.6■□□□□ 0.73
SMPD1-201ENST00000342245 ALOX15P16050 662 aaPredicted RBP19.6■□□□□ 0.73
SMPD1-201ENST00000342245 AMPD1P23109 780 aa19.6■□□□□ 0.73
SMPD1-201ENST00000342245 GTF2H1P32780 548 aa19.6■□□□□ 0.73
SMPD1-201ENST00000342245 NAPAP54920 295 aa19.6■□□□□ 0.73
SMPD1-201ENST00000342245 PDE1BQ01064 536 aa19.6■□□□□ 0.73
SMPD1-201ENST00000342245 TCERG1LQ5VWI1 586 aa19.6■□□□□ 0.73
SMPD1-201ENST00000342245 FNDC8Q8TC99 324 aa19.6■□□□□ 0.73
SMPD1-201ENST00000342245 SIKE1Q9BRV8 207 aa19.6■□□□□ 0.73
SMPD1-201ENST00000342245 DNAJC18Q9H819 358 aa19.6■□□□□ 0.73
SMPD1-201ENST00000342245 BUD23O43709 281 aaKnown RBP19.6■□□□□ 0.73
SMPD1-201ENST00000342245 NMT2O60551 498 aa19.6■□□□□ 0.73
SMPD1-201ENST00000342245 ZBED4O75132 1171 aa19.6■□□□□ 0.73
SMPD1-201ENST00000342245 MTA2O94776 668 aa19.6■□□□□ 0.73
SMPD1-201ENST00000342245 HERC4Q5GLZ8 1057 aaPredicted RBP19.6■□□□□ 0.73
SMPD1-201ENST00000342245 SH3D19Q5HYK7 790 aa19.6■□□□□ 0.73
SMPD1-201ENST00000342245 PNMA1Q8ND90 353 aa19.6■□□□□ 0.73
SMPD1-201ENST00000342245 TBCKQ8TEA7 893 aa19.6■□□□□ 0.73
SMPD1-201ENST00000342245 CYP2D7A0A087X1C5 515 aa19.59■□□□□ 0.73
SMPD1-201ENST00000342245 EXOC1LA0A1B0GW35 172 aa19.59■□□□□ 0.73
SMPD1-201ENST00000342245 PLSCR1O15162 318 aa19.59■□□□□ 0.73
SMPD1-201ENST00000342245 TPD52L2O43399 206 aaKnown RBP19.59■□□□□ 0.73
SMPD1-201ENST00000342245 TM7SF2O76062 418 aa19.59■□□□□ 0.73
SMPD1-201ENST00000342245 PYGMP11217 842 aa19.59■□□□□ 0.73
SMPD1-201ENST00000342245 KCNJ1P48048 391 aa19.59■□□□□ 0.73
SMPD1-201ENST00000342245 BTBD9Q96Q07 612 aa19.59■□□□□ 0.73
SMPD1-201ENST00000342245 PRDM16Q9HAZ2 1276 aa19.59■□□□□ 0.73
SMPD1-201ENST00000342245 MAD2L2Q9UI95 211 aa19.59■□□□□ 0.73
SMPD1-201ENST00000342245 LAMB1P07942 1786 aa19.59■□□□□ 0.73
SMPD1-201ENST00000342245 TMEM247A6NEH6 219 aa19.59■□□□□ 0.73
SMPD1-201ENST00000342245 ZNF862O60290 1169 aa19.59■□□□□ 0.73
SMPD1-201ENST00000342245 PDE8AO60658 829 aa19.59■□□□□ 0.73
SMPD1-201ENST00000342245 IVDP26440 423 aa19.59■□□□□ 0.73
SMPD1-201ENST00000342245 RPA3P35244 121 aaPredicted RBP19.59■□□□□ 0.73
SMPD1-201ENST00000342245 HOXD12P35452 270 aa19.59■□□□□ 0.73
SMPD1-201ENST00000342245 MTTPP55157 894 aa19.59■□□□□ 0.73
SMPD1-201ENST00000342245 BORAQ6PGQ7 559 aa19.59■□□□□ 0.73
SMPD1-201ENST00000342245 RBM44Q6ZP01 1051 aaKnown RBP19.59■□□□□ 0.73
SMPD1-201ENST00000342245 RIPOR1Q6ZS17 1223 aa19.59■□□□□ 0.73
SMPD1-201ENST00000342245 C3orf62Q6ZUJ4 267 aa19.59■□□□□ 0.73
SMPD1-201ENST00000342245 SNRNP27Q8WVK2 155 aaKnown RBP19.59■□□□□ 0.73
SMPD1-201ENST00000342245 KLHL4Q9C0H6 718 aa19.59■□□□□ 0.73
SMPD1-201ENST00000342245 UBA5Q9GZZ9 404 aa19.59■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms