RNA–Protein interactions for RNA: ENST00000339488.8

PTCHD4-201, Transcript of patched domain containing 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PTCHD4, Length 2,850 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4-201ENST00000339488 PRR36Q9H6K5 1346 aa10.22□□□□□ -0.77
PTCHD4-201ENST00000339488 H3BRJ5 948 aa10.21□□□□□ -0.77
PTCHD4-201ENST00000339488 TRAFD1O14545 582 aaPredicted RBP10.21□□□□□ -0.77
PTCHD4-201ENST00000339488 PCYT1AP49585 367 aa10.21□□□□□ -0.77
PTCHD4-201ENST00000339488 GRAMD1BQ3KR37 738 aa10.21□□□□□ -0.77
PTCHD4-201ENST00000339488 TMEM67Q5HYA8 995 aa10.21□□□□□ -0.77
PTCHD4-201ENST00000339488 VPS36Q86VN1 386 aa10.21□□□□□ -0.77
PTCHD4-201ENST00000339488 SFR1Q86XK3 245 aa10.21□□□□□ -0.77
PTCHD4-201ENST00000339488 GOLM1Q8NBJ4 401 aa10.21□□□□□ -0.77
PTCHD4-201ENST00000339488 CNBD2Q96M20 576 aa10.21□□□□□ -0.77
PTCHD4-201ENST00000339488 CRNKL1Q9BZJ0 848 aaKnown RBP10.21□□□□□ -0.77
PTCHD4-201ENST00000339488 PUS7LQ9H0K6 701 aaKnown RBP10.21□□□□□ -0.77
PTCHD4-201ENST00000339488 STMN4Q9H169 189 aaPredicted RBP10.21□□□□□ -0.77
PTCHD4-201ENST00000339488 RRN3Q9NYV6 651 aa10.21□□□□□ -0.77
PTCHD4-201ENST00000339488 KANSL3Q9P2N6 904 aa10.21□□□□□ -0.77
PTCHD4-201ENST00000339488 DMTF1Q9Y222 760 aa10.21□□□□□ -0.77
PTCHD4-201ENST00000339488 AK5Q9Y6K8 562 aa10.21□□□□□ -0.77
PTCHD4-201ENST00000339488 EMSYQ7Z589 1322 aa10.21□□□□□ -0.77
PTCHD4-201ENST00000339488 CAPN8A6NHC0 703 aa10.21□□□□□ -0.78
PTCHD4-201ENST00000339488 MEI4A8MW99 385 aa10.21□□□□□ -0.78
PTCHD4-201ENST00000339488 WASLO00401 505 aaPredicted RBP10.21□□□□□ -0.78
PTCHD4-201ENST00000339488 KDM1AO60341 852 aa10.21□□□□□ -0.78
PTCHD4-201ENST00000339488 LDHBP07195 334 aaKnown RBP10.21□□□□□ -0.78
PTCHD4-201ENST00000339488 RBP3P10745 1247 aa10.21□□□□□ -0.78
PTCHD4-201ENST00000339488 ENPP1P22413 925 aa10.21□□□□□ -0.78
PTCHD4-201ENST00000339488 BTDP43251 543 aa10.21□□□□□ -0.78
PTCHD4-201ENST00000339488 TMED2Q15363 201 aa10.21□□□□□ -0.78
PTCHD4-201ENST00000339488 TLR1Q15399 786 aa10.21□□□□□ -0.78
PTCHD4-201ENST00000339488 CLUL1Q15846 466 aa10.21□□□□□ -0.78
PTCHD4-201ENST00000339488 SLC9C1Q4G0N8 1177 aa10.21□□□□□ -0.78
PTCHD4-201ENST00000339488 DCAF12L1Q5VU92 463 aa10.21□□□□□ -0.78
PTCHD4-201ENST00000339488 USP43Q70EL4 1123 aa10.21□□□□□ -0.78
PTCHD4-201ENST00000339488 C4orf33Q8N1A6 199 aa10.21□□□□□ -0.78
PTCHD4-201ENST00000339488 SKA1Q96BD8 255 aa10.21□□□□□ -0.78
PTCHD4-201ENST00000339488 VPS50Q96JG6 964 aa10.21□□□□□ -0.78
PTCHD4-201ENST00000339488 HEY2Q9UBP5 337 aa10.21□□□□□ -0.78
PTCHD4-201ENST00000339488 ADAMTS6Q9UKP5 1117 aa10.21□□□□□ -0.78
PTCHD4-201ENST00000339488 TTLL3Q9Y4R7 772 aa10.21□□□□□ -0.78
PTCHD4-201ENST00000339488 ARIH1Q9Y4X5 557 aaPredicted RBP10.21□□□□□ -0.78
PTCHD4-201ENST00000339488 A0A1W2PRG0 241 aa10.2□□□□□ -0.78
PTCHD4-201ENST00000339488 CCDC188H7C350 402 aa10.2□□□□□ -0.78
PTCHD4-201ENST00000339488 XPO1O14980 1071 aaKnown RBP10.2□□□□□ -0.78
PTCHD4-201ENST00000339488 ADAMTS3O15072 1205 aa10.2□□□□□ -0.78
PTCHD4-201ENST00000339488 CNOT3O75175 753 aaKnown RBP10.2□□□□□ -0.78
PTCHD4-201ENST00000339488 ZBTB48P10074 688 aaPredicted RBP10.2□□□□□ -0.78
PTCHD4-201ENST00000339488 PIK3CAP42336 1068 aa10.2□□□□□ -0.78
PTCHD4-201ENST00000339488 GSSP48637 474 aa10.2□□□□□ -0.78
PTCHD4-201ENST00000339488 ADAM17P78536 824 aa10.2□□□□□ -0.78
PTCHD4-201ENST00000339488 ASPHQ12797 758 aa10.2□□□□□ -0.78
PTCHD4-201ENST00000339488 STRN3Q13033 797 aa10.2□□□□□ -0.78
PTCHD4-201ENST00000339488 RRP1BQ14684 758 aaKnown RBP10.2□□□□□ -0.78
PTCHD4-201ENST00000339488 PDK1Q15118 436 aa10.2□□□□□ -0.78
PTCHD4-201ENST00000339488 EDRF1Q3B7T1 1238 aa10.2□□□□□ -0.78
PTCHD4-201ENST00000339488 C1orf146Q5VVC0 180 aa10.2□□□□□ -0.78
PTCHD4-201ENST00000339488 OTOAQ7RTW8 1153 aa10.2□□□□□ -0.78
PTCHD4-201ENST00000339488 GRAMD2AQ8IUY3 354 aa10.2□□□□□ -0.78
PTCHD4-201ENST00000339488 HELQQ8TDG4 1101 aa10.2□□□□□ -0.78
PTCHD4-201ENST00000339488 LRRC15Q8TF66 581 aa10.2□□□□□ -0.78
PTCHD4-201ENST00000339488 PTCD3Q96EY7 689 aaKnown RBP10.2□□□□□ -0.78
PTCHD4-201ENST00000339488 ANKRD36BP1Q96IX9 119 aa10.2□□□□□ -0.78
PTCHD4-201ENST00000339488 THTPAQ9BU02 230 aa10.2□□□□□ -0.78
PTCHD4-201ENST00000339488 METTL22Q9BUU2 404 aaPredicted RBP10.2□□□□□ -0.78
PTCHD4-201ENST00000339488 WNT8AQ9H1J5 351 aa10.2□□□□□ -0.78
PTCHD4-201ENST00000339488 PLGRKTQ9HBL7 147 aa10.2□□□□□ -0.78
PTCHD4-201ENST00000339488 PALMDQ9NP74 551 aa10.2□□□□□ -0.78
PTCHD4-201ENST00000339488 KCNQ5Q9NR82 932 aa10.2□□□□□ -0.78
PTCHD4-201ENST00000339488 ZBTB1Q9Y2K1 713 aa10.2□□□□□ -0.78
PTCHD4-201ENST00000339488 ZNF536O15090 1300 aa10.2□□□□□ -0.78
PTCHD4-201ENST00000339488 XIRP1Q702N8 1843 aaKnown RBP10.2□□□□□ -0.78
PTCHD4-201ENST00000339488 TESPA1A2RU30 521 aaPredicted RBP10.2□□□□□ -0.78
PTCHD4-201ENST00000339488 CDH2P19022 906 aaPredicted RBP10.2□□□□□ -0.78
PTCHD4-201ENST00000339488 CHKAP35790 457 aa10.2□□□□□ -0.78
PTCHD4-201ENST00000339488 KCNJ1P48048 391 aa10.2□□□□□ -0.78
PTCHD4-201ENST00000339488 CLK3P49761 638 aaKnown RBP10.2□□□□□ -0.78
PTCHD4-201ENST00000339488 YWHAGP61981 247 aaKnown RBP eCLIP10.2□□□□□ -0.78
PTCHD4-201ENST00000339488 FOLH1Q04609 750 aa10.2□□□□□ -0.78
PTCHD4-201ENST00000339488 TRIP10Q15642 601 aa10.2□□□□□ -0.78
PTCHD4-201ENST00000339488 PHKG1Q16816 387 aa10.2□□□□□ -0.78
PTCHD4-201ENST00000339488 TIGD2Q4W5G0 525 aa10.2□□□□□ -0.78
PTCHD4-201ENST00000339488 ARSHQ5FYA8 562 aa10.2□□□□□ -0.78
PTCHD4-201ENST00000339488 POTEHQ6S545 545 aa10.2□□□□□ -0.78
PTCHD4-201ENST00000339488 XKR5Q6UX68 686 aa10.2□□□□□ -0.78
PTCHD4-201ENST00000339488 EFCAB3Q8N7B9 438 aa10.2□□□□□ -0.78
PTCHD4-201ENST00000339488 GSTCDQ8NEC7 633 aa10.2□□□□□ -0.78
PTCHD4-201ENST00000339488 RAB3IL1Q8TBN0 382 aa10.2□□□□□ -0.78
PTCHD4-201ENST00000339488 GDPD5Q8WTR4 605 aa10.2□□□□□ -0.78
PTCHD4-201ENST00000339488 PYROXD1Q8WU10 500 aa10.2□□□□□ -0.78
PTCHD4-201ENST00000339488 HPS1Q92902 700 aa10.2□□□□□ -0.78
PTCHD4-201ENST00000339488 P2RX5Q93086 422 aa10.2□□□□□ -0.78
PTCHD4-201ENST00000339488 ZNF496Q96IT1 587 aaPredicted RBP10.2□□□□□ -0.78
PTCHD4-201ENST00000339488 FOXP1Q9H334 677 aaPredicted RBP10.2□□□□□ -0.78
PTCHD4-201ENST00000339488 ANLNQ9NQW6 1124 aa10.2□□□□□ -0.78
PTCHD4-201ENST00000339488 USP40Q9NVE5 1235 aa10.2□□□□□ -0.78
PTCHD4-201ENST00000339488 GPRC5DQ9NZD1 345 aa10.2□□□□□ -0.78
PTCHD4-201ENST00000339488 NWD2Q9ULI1 1742 aa10.2□□□□□ -0.78
PTCHD4-201ENST00000339488 RGPD8O14715 1765 aaPredicted RBP10.2□□□□□ -0.78
PTCHD4-201ENST00000339488 NDC80O14777 642 aa10.2□□□□□ -0.78
PTCHD4-201ENST00000339488 TOM1O60784 492 aa10.2□□□□□ -0.78
PTCHD4-201ENST00000339488 CHEK2O96017 543 aa10.2□□□□□ -0.78
PTCHD4-201ENST00000339488 ZBTB16Q05516 673 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 81.9 ms