RNA–Protein interactions for RNA: ENST00000334389.5

LINC00643-201, long intergenic non-protein coding RNA 643, humanhuman

TSL 2 BASIC

Gene LINC00643, Length 3,247 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00643-201ENST00000334389 CTNNB1P35222 781 aa1.82□□□□□ -2.12
LINC00643-201ENST00000334389 RECQLP46063 649 aaPredicted RBP1.82□□□□□ -2.12
LINC00643-201ENST00000334389 HMGCS2P54868 508 aa1.82□□□□□ -2.12
LINC00643-201ENST00000334389 DEFB103AP81534 67 aa1.82□□□□□ -2.12
LINC00643-201ENST00000334389 PEX6Q13608 980 aa1.82□□□□□ -2.12
LINC00643-201ENST00000334389 ECM1Q16610 540 aa1.82□□□□□ -2.12
LINC00643-201ENST00000334389 ANO6Q4KMQ2 910 aa1.82□□□□□ -2.12
LINC00643-201ENST00000334389 HSP90AB4PQ58FF6 505 aa1.82□□□□□ -2.12
LINC00643-201ENST00000334389 LRRC73Q5JTD7 316 aa1.82□□□□□ -2.12
LINC00643-201ENST00000334389 HDGFL1Q5TGJ6 251 aa1.82□□□□□ -2.12
LINC00643-201ENST00000334389 LARP1BQ659C4 914 aaKnown RBP1.82□□□□□ -2.12
LINC00643-201ENST00000334389 PARS2Q7L3T8 475 aaKnown RBP1.82□□□□□ -2.12
LINC00643-201ENST00000334389 BEND5Q7L4P6 421 aa1.82□□□□□ -2.12
LINC00643-201ENST00000334389 VSIG10LQ86VR7 867 aa1.82□□□□□ -2.12
LINC00643-201ENST00000334389 DTX1Q86Y01 620 aa1.82□□□□□ -2.12
LINC00643-201ENST00000334389 CCDC82Q8N4S0 544 aa1.82□□□□□ -2.12
LINC00643-201ENST00000334389 SIMC1Q8NDZ2 872 aa1.82□□□□□ -2.12
LINC00643-201ENST00000334389 OR6J1Q8NGC5 347 aa1.82□□□□□ -2.12
LINC00643-201ENST00000334389 SSC4DQ8WTU2 575 aa1.82□□□□□ -2.12
LINC00643-201ENST00000334389 POF1BQ8WVV4 589 aa1.82□□□□□ -2.12
LINC00643-201ENST00000334389 GOLGA1Q92805 767 aa1.82□□□□□ -2.12
LINC00643-201ENST00000334389 MARK4Q96L34 752 aa1.82□□□□□ -2.12
LINC00643-201ENST00000334389 TEFMQ96QE5 360 aaKnown RBP1.82□□□□□ -2.12
LINC00643-201ENST00000334389 MMS19Q96T76 1030 aa1.82□□□□□ -2.12
LINC00643-201ENST00000334389 C17orf80Q9BSJ5 609 aa1.82□□□□□ -2.12
LINC00643-201ENST00000334389 GNL3Q9BVP2 549 aaKnown RBP eCLIP1.82□□□□□ -2.12
LINC00643-201ENST00000334389 NUSAP1Q9BXS6 441 aaKnown RBP1.82□□□□□ -2.12
LINC00643-201ENST00000334389 RNF32Q9H0A6 362 aa1.82□□□□□ -2.12
LINC00643-201ENST00000334389 IGFLR1Q9H665 355 aa1.82□□□□□ -2.12
LINC00643-201ENST00000334389 TLE6Q9H808 572 aa1.82□□□□□ -2.12
LINC00643-201ENST00000334389 SEC31BQ9NQW1 1179 aa1.82□□□□□ -2.12
LINC00643-201ENST00000334389 ARHGAP20Q9P2F6 1191 aa1.82□□□□□ -2.12
LINC00643-201ENST00000334389 TNNQ9UQP3 1299 aa1.82□□□□□ -2.12
LINC00643-201ENST00000334389 ZNF510Q9Y2H8 683 aa1.82□□□□□ -2.12
LINC00643-201ENST00000334389 MAP4K5Q9Y4K4 846 aa1.82□□□□□ -2.12
LINC00643-201ENST00000334389 SF3B1O75533 1304 aaKnown RBP eCLIP1.82□□□□□ -2.12
LINC00643-201ENST00000334389 A0A1B0GTW7 788 aa1.81□□□□□ -2.12
LINC00643-201ENST00000334389 SSU72P8A0A1W2PR75 194 aa1.81□□□□□ -2.12
LINC00643-201ENST00000334389 FAM92AA1XBS5 289 aa1.81□□□□□ -2.12
LINC00643-201ENST00000334389 C1QTNF9BB2RNN3 333 aa1.81□□□□□ -2.12
LINC00643-201ENST00000334389 NCKAP5O14513 1909 aa1.81□□□□□ -2.12
LINC00643-201ENST00000334389 GPR32O75388 356 aa1.81□□□□□ -2.12
LINC00643-201ENST00000334389 RFPL3O75679 317 aa1.81□□□□□ -2.12
LINC00643-201ENST00000334389 HEXAP06865 529 aa1.81□□□□□ -2.12
LINC00643-201ENST00000334389 C1QTNF9P0C862 333 aa1.81□□□□□ -2.12
LINC00643-201ENST00000334389 HCLS1P14317 486 aaPredicted RBP1.81□□□□□ -2.12
LINC00643-201ENST00000334389 MZF1P28698 734 aaPredicted RBP1.81□□□□□ -2.12
LINC00643-201ENST00000334389 GRK6P43250 576 aa1.81□□□□□ -2.12
LINC00643-201ENST00000334389 NOTCH1P46531 2555 aa1.81□□□□□ -2.12
LINC00643-201ENST00000334389 CLCNKAP51800 687 aa1.81□□□□□ -2.12
LINC00643-201ENST00000334389 TMEM62Q0P6H9 643 aa1.81□□□□□ -2.12
LINC00643-201ENST00000334389 GRIK3Q13003 919 aa1.81□□□□□ -2.12
LINC00643-201ENST00000334389 SEPT7Q16181 437 aaKnown RBP1.81□□□□□ -2.12
LINC00643-201ENST00000334389 CCDC57Q2TAC2 916 aa1.81□□□□□ -2.12
LINC00643-201ENST00000334389 PAN2Q504Q3 1202 aaKnown RBP1.81□□□□□ -2.12
LINC00643-201ENST00000334389 MYSM1Q5VVJ2 828 aa1.81□□□□□ -2.12
LINC00643-201ENST00000334389 DUSP27Q5VZP5 1158 aa1.81□□□□□ -2.12
LINC00643-201ENST00000334389 CDCA2Q69YH5 1023 aaPredicted RBP1.81□□□□□ -2.12
LINC00643-201ENST00000334389 CD300LGQ6UXG3 332 aa1.81□□□□□ -2.12
LINC00643-201ENST00000334389 C17orf82Q86X59 251 aaPredicted RBP1.81□□□□□ -2.12
LINC00643-201ENST00000334389 DGKHQ86XP1 1220 aa1.81□□□□□ -2.12
LINC00643-201ENST00000334389 ECHDC2Q86YB7 292 aa1.81□□□□□ -2.12
LINC00643-201ENST00000334389 FMNL3Q8IVF7 1028 aa1.81□□□□□ -2.12
LINC00643-201ENST00000334389 AVL9Q8NBF6 648 aa1.81□□□□□ -2.12
LINC00643-201ENST00000334389 NSUN6Q8TEA1 469 aaKnown RBP1.81□□□□□ -2.12
LINC00643-201ENST00000334389 FGF11Q92914 225 aa1.81□□□□□ -2.12
LINC00643-201ENST00000334389 KISS1RQ969F8 398 aaPredicted RBP1.81□□□□□ -2.12
LINC00643-201ENST00000334389 ASB16Q96NS5 453 aa1.81□□□□□ -2.12
LINC00643-201ENST00000334389 CTRCQ99895 268 aa1.81□□□□□ -2.12
LINC00643-201ENST00000334389 UBXN6Q9BZV1 441 aa1.81□□□□□ -2.12
LINC00643-201ENST00000334389 TMEM245Q9H330 911 aa1.81□□□□□ -2.12
LINC00643-201ENST00000334389 TMX1Q9H3N1 280 aa1.81□□□□□ -2.12
LINC00643-201ENST00000334389 SMARCAD1Q9H4L7 1026 aa1.81□□□□□ -2.12
LINC00643-201ENST00000334389 SGK2Q9HBY8 427 aa1.81□□□□□ -2.12
LINC00643-201ENST00000334389 KCND1Q9NSA2 647 aa1.81□□□□□ -2.12
LINC00643-201ENST00000334389 RPH3AQ9Y2J0 694 aaPredicted RBP1.81□□□□□ -2.12
LINC00643-201ENST00000334389 MAFBQ9Y5Q3 323 aaPredicted RBP1.81□□□□□ -2.12
LINC00643-201ENST00000334389 FAT3Q8TDW7 4589 aa1.81□□□□□ -2.12
LINC00643-201ENST00000334389 ATXN2Q99700 1313 aaKnown RBP1.81□□□□□ -2.12
LINC00643-201ENST00000334389 CYP3A7-CYP3A51PA0A087WV96 503 aa1.81□□□□□ -2.12
LINC00643-201ENST00000334389 DRGXA6NNA5 263 aa1.81□□□□□ -2.12
LINC00643-201ENST00000334389 IDSB3KWA1 339 aa1.81□□□□□ -2.12
LINC00643-201ENST00000334389 HGSO14964 777 aaPredicted RBP1.81□□□□□ -2.12
LINC00643-201ENST00000334389 AP5Z1O43299 807 aa1.81□□□□□ -2.12
LINC00643-201ENST00000334389 RAB11FIP3O75154 756 aa1.81□□□□□ -2.12
LINC00643-201ENST00000334389 RPP40O75818 363 aaKnown RBP1.81□□□□□ -2.12
LINC00643-201ENST00000334389 POLR3DP05423 398 aaPredicted RBP1.81□□□□□ -2.12
LINC00643-201ENST00000334389 RAB40ALP0C0E4 278 aa1.81□□□□□ -2.12
LINC00643-201ENST00000334389 HMGA1P17096 107 aaKnown RBP1.81□□□□□ -2.12
LINC00643-201ENST00000334389 CD72P21854 359 aa1.81□□□□□ -2.12
LINC00643-201ENST00000334389 IDSP22304 550 aa1.81□□□□□ -2.12
LINC00643-201ENST00000334389 FSHRP23945 695 aa1.81□□□□□ -2.12
LINC00643-201ENST00000334389 CYP3A7P24462 503 aa1.81□□□□□ -2.12
LINC00643-201ENST00000334389 TARSP26639 723 aaKnown RBP1.81□□□□□ -2.12
LINC00643-201ENST00000334389 RFC5P40937 340 aa1.81□□□□□ -2.12
LINC00643-201ENST00000334389 ERVFC1P60507 584 aa1.81□□□□□ -2.12
LINC00643-201ENST00000334389 SETQ01105 290 aaPredicted RBP1.81□□□□□ -2.12
LINC00643-201ENST00000334389 SPP2Q13103 211 aa1.81□□□□□ -2.12
LINC00643-201ENST00000334389 PLCB4Q15147 1175 aa1.81□□□□□ -2.12
LINC00643-201ENST00000334389 CERKLQ49MI3 558 aaPredicted RBP1.81□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms