RNA–Protein interactions for RNA: ENST00000321117.9

DNMT3A-202, Transcript of DNA methyltransferase 3 alpha, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene DNMT3A, Length 4,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-202ENST00000321117 MAP7D3Q8IWC1 876 aa13.49□□□□□ -0.25
DNMT3A-202ENST00000321117 DTX3LQ8TDB6 740 aa13.49□□□□□ -0.25
DNMT3A-202ENST00000321117 CFAP36Q96G28 342 aa13.49□□□□□ -0.25
DNMT3A-202ENST00000321117 NAF1Q96HR8 494 aaKnown RBP13.49□□□□□ -0.25
DNMT3A-202ENST00000321117 RMDN3Q96TC7 470 aa13.49□□□□□ -0.25
DNMT3A-202ENST00000321117 CYP3A7-CYP3A51PA0A087WV96 503 aa13.49□□□□□ -0.25
DNMT3A-202ENST00000321117 NVLO15381 856 aaKnown RBP13.49□□□□□ -0.25
DNMT3A-202ENST00000321117 TGFB1I1O43294 461 aa13.49□□□□□ -0.25
DNMT3A-202ENST00000321117 SPATA31C1P0DKV0 1188 aa13.49□□□□□ -0.25
DNMT3A-202ENST00000321117 CYP3A7P24462 503 aa13.49□□□□□ -0.25
DNMT3A-202ENST00000321117 BMT2Q1RMZ1 405 aa13.49□□□□□ -0.25
DNMT3A-202ENST00000321117 SEPT14Q6ZU15 432 aa13.49□□□□□ -0.25
DNMT3A-202ENST00000321117 SLFN11Q7Z7L1 901 aa13.49□□□□□ -0.25
DNMT3A-202ENST00000321117 RCOR2Q8IZ40 523 aa13.49□□□□□ -0.25
DNMT3A-202ENST00000321117 SLC5A5Q92911 643 aa13.49□□□□□ -0.25
DNMT3A-202ENST00000321117 CTNNAL1Q9UBT7 734 aa13.49□□□□□ -0.25
DNMT3A-202ENST00000321117 DDX3YO15523 660 aaKnown RBP13.48□□□□□ -0.25
DNMT3A-202ENST00000321117 TFAMQ00059 246 aaKnown RBP13.48□□□□□ -0.25
DNMT3A-202ENST00000321117 MAP7Q14244 749 aa13.48□□□□□ -0.25
DNMT3A-202ENST00000321117 CKAP2Q8WWK9 683 aa13.48□□□□□ -0.25
DNMT3A-202ENST00000321117 TIPINQ9BVW5 301 aa13.48□□□□□ -0.25
DNMT3A-202ENST00000321117 VCX3AQ9NNX9 186 aa13.48□□□□□ -0.25
DNMT3A-202ENST00000321117 NXF1Q9UBU9 619 aaKnown RBP13.48□□□□□ -0.25
DNMT3A-202ENST00000321117 NWD2Q9ULI1 1742 aa13.48□□□□□ -0.25
DNMT3A-202ENST00000321117 LAMB4A4D0S4 1761 aa13.48□□□□□ -0.25
DNMT3A-202ENST00000321117 SPECC1L-ADORA2AF8WAN1 911 aa13.48□□□□□ -0.25
DNMT3A-202ENST00000321117 PPP1R11O60927 126 aaPredicted RBP13.48□□□□□ -0.25
DNMT3A-202ENST00000321117 MUTP22033 750 aa13.48□□□□□ -0.25
DNMT3A-202ENST00000321117 RRM1P23921 792 aa13.48□□□□□ -0.25
DNMT3A-202ENST00000321117 CNGA1P29973 690 aa13.48□□□□□ -0.25
DNMT3A-202ENST00000321117 SFNP31947 248 aa13.48□□□□□ -0.25
DNMT3A-202ENST00000321117 MAP3K21Q5TCX8 1036 aa13.48□□□□□ -0.25
DNMT3A-202ENST00000321117 SLFN12LQ6IEE8 588 aa13.48□□□□□ -0.25
DNMT3A-202ENST00000321117 SCARA5Q6ZMJ2 495 aa13.48□□□□□ -0.25
DNMT3A-202ENST00000321117 CCDC125Q86Z20 511 aa13.48□□□□□ -0.25
DNMT3A-202ENST00000321117 MXRA8Q9BRK3 442 aa13.48□□□□□ -0.25
DNMT3A-202ENST00000321117 TSSK1BQ9BXA7 367 aa13.48□□□□□ -0.25
DNMT3A-202ENST00000321117 PPCSQ9HAB8 311 aa13.48□□□□□ -0.25
DNMT3A-202ENST00000321117 FEM1BQ9UK73 627 aa13.48□□□□□ -0.25
DNMT3A-202ENST00000321117 COL1A1P02452 1464 aaPredicted RBP13.48□□□□□ -0.25
DNMT3A-202ENST00000321117 MEIS2O14770 477 aa13.48□□□□□ -0.25
DNMT3A-202ENST00000321117 PSAPP07602 524 aa13.48□□□□□ -0.25
DNMT3A-202ENST00000321117 ARP10275 920 aa13.48□□□□□ -0.25
DNMT3A-202ENST00000321117 TBXAS1P24557 533 aaPredicted RBP13.48□□□□□ -0.25
DNMT3A-202ENST00000321117 SLC30A9Q6PML9 568 aa13.48□□□□□ -0.25
DNMT3A-202ENST00000321117 C1orf186Q6ZWK4 172 aa13.48□□□□□ -0.25
DNMT3A-202ENST00000321117 OTOP1Q7RTM1 612 aa13.48□□□□□ -0.25
DNMT3A-202ENST00000321117 NOP9Q86U38 636 aaKnown RBP13.48□□□□□ -0.25
DNMT3A-202ENST00000321117 CRLF3Q8IUI8 442 aa13.48□□□□□ -0.25
DNMT3A-202ENST00000321117 ZBTB8OSQ8IWT0 167 aa13.48□□□□□ -0.25
DNMT3A-202ENST00000321117 KAT5Q92993 513 aa13.48□□□□□ -0.25
DNMT3A-202ENST00000321117 MPHOSPH6Q99547 160 aaKnown RBP13.48□□□□□ -0.25
DNMT3A-202ENST00000321117 POP1Q99575 1024 aaKnown RBP13.48□□□□□ -0.25
DNMT3A-202ENST00000321117 KLF6Q99612 283 aaPredicted RBP13.48□□□□□ -0.25
DNMT3A-202ENST00000321117 NINJ2Q9NZG7 142 aa13.48□□□□□ -0.25
DNMT3A-202ENST00000321117 C5orf60A6NFR6 353 aa13.47□□□□□ -0.25
DNMT3A-202ENST00000321117 TOM1L1O75674 476 aa13.47□□□□□ -0.25
DNMT3A-202ENST00000321117 VCAM1P19320 739 aa13.47□□□□□ -0.25
DNMT3A-202ENST00000321117 SH3BGRP55822 239 aaPredicted RBP13.47□□□□□ -0.25
DNMT3A-202ENST00000321117 RFX8Q6ZV50 586 aa13.47□□□□□ -0.25
DNMT3A-202ENST00000321117 NLRP9Q7RTR0 991 aa13.47□□□□□ -0.25
DNMT3A-202ENST00000321117 MAGEC3Q8TD91 643 aa13.47□□□□□ -0.25
DNMT3A-202ENST00000321117 IKZF4Q9H2S9 585 aa13.47□□□□□ -0.25
DNMT3A-202ENST00000321117 GAKO14976 1311 aa13.47□□□□□ -0.25
DNMT3A-202ENST00000321117 FRMPD4Q14CM0 1322 aa13.47□□□□□ -0.25
DNMT3A-202ENST00000321117 STK10O94804 968 aaKnown RBP13.47□□□□□ -0.25
DNMT3A-202ENST00000321117 LDHAP00338 332 aaKnown RBP13.47□□□□□ -0.25
DNMT3A-202ENST00000321117 PGM1P36871 562 aa13.47□□□□□ -0.25
DNMT3A-202ENST00000321117 SNRPFP62306 86 aaKnown RBP13.47□□□□□ -0.25
DNMT3A-202ENST00000321117 TMEM154Q6P9G4 183 aa13.47□□□□□ -0.25
DNMT3A-202ENST00000321117 PPM1NQ8N819 430 aa13.47□□□□□ -0.25
DNMT3A-202ENST00000321117 ETNPPLQ8TBG4 499 aa13.47□□□□□ -0.25
DNMT3A-202ENST00000321117 SENP7Q9BQF6 1050 aa13.47□□□□□ -0.25
DNMT3A-202ENST00000321117 ZNF341Q9BYN7 854 aa13.47□□□□□ -0.25
DNMT3A-202ENST00000321117 CHST7Q9NS84 486 aa13.47□□□□□ -0.25
DNMT3A-202ENST00000321117 GABBR1Q9UBS5 961 aa13.47□□□□□ -0.25
DNMT3A-202ENST00000321117 SPATA31A5Q5VU36 1347 aa13.47□□□□□ -0.25
DNMT3A-202ENST00000321117 SPATA31A7Q8IWB4 1347 aa13.47□□□□□ -0.25
DNMT3A-202ENST00000321117 RGL2O15211 777 aa13.47□□□□□ -0.25
DNMT3A-202ENST00000321117 PLA2G4FQ68DD2 849 aa13.47□□□□□ -0.25
DNMT3A-202ENST00000321117 NAIF1Q69YI7 327 aaPredicted RBP13.47□□□□□ -0.25
DNMT3A-202ENST00000321117 EPS8L1Q8TE68 723 aa13.47□□□□□ -0.25
DNMT3A-202ENST00000321117 DHX38Q92620 1227 aaKnown RBP13.47□□□□□ -0.25
DNMT3A-202ENST00000321117 TTC1Q99614 292 aa13.47□□□□□ -0.25
DNMT3A-202ENST00000321117 LRRC4BQ9NT99 713 aa13.47□□□□□ -0.25
DNMT3A-202ENST00000321117 HERC5Q9UII4 1024 aaKnown RBP13.47□□□□□ -0.25
DNMT3A-202ENST00000321117 IGSF9BQ9UPX0 1349 aa13.47□□□□□ -0.25
DNMT3A-202ENST00000321117 NCALDP61601 193 aa13.47□□□□□ -0.25
DNMT3A-202ENST00000321117 ANKRD20A2Q5SQ80 823 aa13.47□□□□□ -0.25
DNMT3A-202ENST00000321117 ANKRD20A1Q5TYW2 823 aa13.47□□□□□ -0.25
DNMT3A-202ENST00000321117 AEBP2Q6ZN18 517 aaPredicted RBP13.47□□□□□ -0.25
DNMT3A-202ENST00000321117 TAS1R2Q8TE23 839 aa13.47□□□□□ -0.25
DNMT3A-202ENST00000321117 ART4Q93070 314 aa13.47□□□□□ -0.25
DNMT3A-202ENST00000321117 ALKBH8Q96BT7 664 aaKnown RBP13.47□□□□□ -0.25
DNMT3A-202ENST00000321117 FAF2Q96CS3 445 aa13.47□□□□□ -0.25
DNMT3A-202ENST00000321117 GMCL1Q96IK5 515 aa13.47□□□□□ -0.25
DNMT3A-202ENST00000321117 DCLK3Q9C098 648 aa13.47□□□□□ -0.25
DNMT3A-202ENST00000321117 GPRC5CQ9NQ84 441 aa13.47□□□□□ -0.25
DNMT3A-202ENST00000321117 KCNH7Q9NS40 1196 aa13.47□□□□□ -0.25
DNMT3A-202ENST00000321117 DDX56Q9NY93 547 aaKnown RBP13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 89.8 ms