RNA–Protein interactions for RNA: ENST00000320280.8

SCAMP1-201, Transcript of secretory carrier membrane protein 1, humanhuman

TSL 3

Gene SCAMP1, Length 3,766 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-201ENST00000320280 SARM1Q6SZW1 724 aa3.58□□□□□ -1.84
SCAMP1-201ENST00000320280 ENOSF1Q7L5Y1 443 aa3.58□□□□□ -1.84
SCAMP1-201ENST00000320280 KCNK18Q7Z418 384 aa3.58□□□□□ -1.84
SCAMP1-201ENST00000320280 BRSK2Q8IWQ3 736 aa3.58□□□□□ -1.84
SCAMP1-201ENST00000320280 TNS4Q8IZW8 715 aa3.58□□□□□ -1.84
SCAMP1-201ENST00000320280 RHBDD1Q8TEB9 315 aa3.58□□□□□ -1.84
SCAMP1-201ENST00000320280 CACTINQ8WUQ7 758 aaKnown RBP3.58□□□□□ -1.84
SCAMP1-201ENST00000320280 PRPF31Q8WWY3 499 aaKnown RBP3.58□□□□□ -1.84
SCAMP1-201ENST00000320280 CCDC94Q9BW85 323 aaPredicted RBP3.58□□□□□ -1.84
SCAMP1-201ENST00000320280 PLVAPQ9BX97 442 aa3.58□□□□□ -1.84
SCAMP1-201ENST00000320280 MRPL44Q9H9J2 332 aaKnown RBP3.58□□□□□ -1.84
SCAMP1-201ENST00000320280 IFT122Q9HBG6 1241 aa3.58□□□□□ -1.84
SCAMP1-201ENST00000320280 CNTN3Q9P232 1028 aa3.58□□□□□ -1.84
SCAMP1-201ENST00000320280 AKT3Q9Y243 479 aa3.58□□□□□ -1.84
SCAMP1-201ENST00000320280 LZTS1Q9Y250 596 aa3.58□□□□□ -1.84
SCAMP1-201ENST00000320280 UMODL1Q5DID0 1318 aa3.58□□□□□ -1.84
SCAMP1-201ENST00000320280 TTC3P53804 2025 aa3.58□□□□□ -1.84
SCAMP1-201ENST00000320280 A0A0B4J269 797 aa3.58□□□□□ -1.84
SCAMP1-201ENST00000320280 CETN3O15182 167 aa3.58□□□□□ -1.84
SCAMP1-201ENST00000320280 RPS6KA5O75582 802 aa3.58□□□□□ -1.84
SCAMP1-201ENST00000320280 KIF4AO95239 1232 aa3.58□□□□□ -1.84
SCAMP1-201ENST00000320280 PAPLNO95428 1278 aa3.58□□□□□ -1.84
SCAMP1-201ENST00000320280 THBS1P07996 1170 aa3.58□□□□□ -1.84
SCAMP1-201ENST00000320280 TRIM21P19474 475 aaKnown RBP3.58□□□□□ -1.84
SCAMP1-201ENST00000320280 YWHAEP62258 255 aaKnown RBP3.58□□□□□ -1.84
SCAMP1-201ENST00000320280 BEX3Q00994 111 aa3.58□□□□□ -1.84
SCAMP1-201ENST00000320280 FPGSQ05932 587 aa3.58□□□□□ -1.84
SCAMP1-201ENST00000320280 SMARCB1Q12824 385 aa3.58□□□□□ -1.84
SCAMP1-201ENST00000320280 ELAVL2Q12926 359 aaKnown RBP3.58□□□□□ -1.84
SCAMP1-201ENST00000320280 GRIK3Q13003 919 aa3.58□□□□□ -1.84
SCAMP1-201ENST00000320280 PSMD6Q15008 389 aa3.58□□□□□ -1.84
SCAMP1-201ENST00000320280 SFR1Q86XK3 245 aa3.58□□□□□ -1.84
SCAMP1-201ENST00000320280 WDR49Q8IV35 697 aa3.58□□□□□ -1.84
SCAMP1-201ENST00000320280 GPD1LQ8N335 351 aa3.58□□□□□ -1.84
SCAMP1-201ENST00000320280 FAM200AQ8TCP9 573 aa3.58□□□□□ -1.84
SCAMP1-201ENST00000320280 ASAP3Q8TDY4 903 aa3.58□□□□□ -1.84
SCAMP1-201ENST00000320280 MFSD14AQ96MC6 490 aa3.58□□□□□ -1.84
SCAMP1-201ENST00000320280 SPOCK3Q9BQ16 436 aa3.58□□□□□ -1.84
SCAMP1-201ENST00000320280 RHOBTB2Q9BYZ6 727 aa3.58□□□□□ -1.84
SCAMP1-201ENST00000320280 HIPK3Q9H422 1215 aa3.58□□□□□ -1.84
SCAMP1-201ENST00000320280 HSFX1Q9UBD0 423 aa3.58□□□□□ -1.84
SCAMP1-201ENST00000320280 PCDHA5Q9Y5H7 936 aa3.58□□□□□ -1.84
SCAMP1-201ENST00000320280 A0A0U1RQF3 1178 aa3.58□□□□□ -1.84
SCAMP1-201ENST00000320280 A0A1W2PNR3 127 aa3.58□□□□□ -1.84
SCAMP1-201ENST00000320280 PP2D1A8MPX8 630 aa3.58□□□□□ -1.84
SCAMP1-201ENST00000320280 C2CD2LO14523 706 aa3.58□□□□□ -1.84
SCAMP1-201ENST00000320280 ABLIM1O14639 778 aa3.58□□□□□ -1.84
SCAMP1-201ENST00000320280 TREHO43280 583 aa3.58□□□□□ -1.84
SCAMP1-201ENST00000320280 TSPAN1O60635 241 aa3.58□□□□□ -1.84
SCAMP1-201ENST00000320280 RB1P06400 928 aa3.58□□□□□ -1.84
SCAMP1-201ENST00000320280 EPB41P11171 864 aaKnown RBP3.58□□□□□ -1.84
SCAMP1-201ENST00000320280 CDC25BP30305 580 aa3.58□□□□□ -1.84
SCAMP1-201ENST00000320280 LRPAP1P30533 357 aa3.58□□□□□ -1.84
SCAMP1-201ENST00000320280 PPM1AP35813 382 aa3.58□□□□□ -1.84
SCAMP1-201ENST00000320280 PSMC2P35998 433 aaKnown RBP3.58□□□□□ -1.84
SCAMP1-201ENST00000320280 LIG4P49917 911 aa3.58□□□□□ -1.84
SCAMP1-201ENST00000320280 YARSP54577 528 aaKnown RBP3.58□□□□□ -1.84
SCAMP1-201ENST00000320280 PSMC6P62333 389 aa3.58□□□□□ -1.84
SCAMP1-201ENST00000320280 MYL5Q02045 173 aa3.58□□□□□ -1.84
SCAMP1-201ENST00000320280 CEBPZQ03701 1054 aaKnown RBP3.58□□□□□ -1.84
SCAMP1-201ENST00000320280 CETN1Q12798 172 aa3.58□□□□□ -1.84
SCAMP1-201ENST00000320280 IKBKEQ14164 716 aa3.58□□□□□ -1.84
SCAMP1-201ENST00000320280 RAB30Q15771 203 aa3.58□□□□□ -1.84
SCAMP1-201ENST00000320280 FIGNQ5HY92 759 aa3.58□□□□□ -1.84
SCAMP1-201ENST00000320280 ATF7IP2Q5U623 682 aa3.58□□□□□ -1.84
SCAMP1-201ENST00000320280 SLC24A5Q71RS6 500 aa3.58□□□□□ -1.84
SCAMP1-201ENST00000320280 ARHGAP30Q7Z6I6 1101 aaPredicted RBP3.58□□□□□ -1.84
SCAMP1-201ENST00000320280 LRRC52Q8N7C0 313 aa3.58□□□□□ -1.84
SCAMP1-201ENST00000320280 XXYLT1Q8NBI6 393 aa3.58□□□□□ -1.84
SCAMP1-201ENST00000320280 URGCPQ8TCY9 931 aa3.58□□□□□ -1.84
SCAMP1-201ENST00000320280 PIGOQ8TEQ8 1089 aa3.58□□□□□ -1.84
SCAMP1-201ENST00000320280 NUDT8Q8WV74 236 aa3.58□□□□□ -1.84
SCAMP1-201ENST00000320280 HSH2DQ96JZ2 352 aa3.58□□□□□ -1.84
SCAMP1-201ENST00000320280 CALR3Q96L12 384 aaKnown RBP3.58□□□□□ -1.84
SCAMP1-201ENST00000320280 TMEM39AQ9NV64 488 aa3.58□□□□□ -1.84
SCAMP1-201ENST00000320280 SETD4Q9NVD3 440 aa3.58□□□□□ -1.84
SCAMP1-201ENST00000320280 LMCD1Q9NZU5 365 aa3.58□□□□□ -1.84
SCAMP1-201ENST00000320280 ITGA11Q9UKX5 1188 aa3.58□□□□□ -1.84
SCAMP1-201ENST00000320280 FRMD4BQ9Y2L6 1034 aa3.58□□□□□ -1.84
SCAMP1-201ENST00000320280 ITIH6Q6UXX5 1313 aa3.58□□□□□ -1.84
SCAMP1-201ENST00000320280 GBF1Q92538 1859 aa3.57□□□□□ -1.84
SCAMP1-201ENST00000320280 COL4A4P53420 1690 aaPredicted RBP3.57□□□□□ -1.84
SCAMP1-201ENST00000320280 SCO2A0A1W2PP80 73 aa3.57□□□□□ -1.84
SCAMP1-201ENST00000320280 A0A1W2PQC6 194 aa3.57□□□□□ -1.84
SCAMP1-201ENST00000320280 DENND3A2RUS2 1198 aa3.57□□□□□ -1.84
SCAMP1-201ENST00000320280 LRRC10BA6NIK2 292 aa3.57□□□□□ -1.84
SCAMP1-201ENST00000320280 POM121CA8CG34 1229 aa3.57□□□□□ -1.84
SCAMP1-201ENST00000320280 GADD45BO75293 160 aaPredicted RBP3.57□□□□□ -1.84
SCAMP1-201ENST00000320280 GCNT3O95395 438 aa3.57□□□□□ -1.84
SCAMP1-201ENST00000320280 ATF7P17544 494 aaPredicted RBP3.57□□□□□ -1.84
SCAMP1-201ENST00000320280 PEX3P56589 373 aa3.57□□□□□ -1.84
SCAMP1-201ENST00000320280 DOC2BQ14184 412 aa3.57□□□□□ -1.84
SCAMP1-201ENST00000320280 LPIN1Q14693 890 aa3.57□□□□□ -1.84
SCAMP1-201ENST00000320280 TRIM60Q495X7 471 aa3.57□□□□□ -1.84
SCAMP1-201ENST00000320280 PLA2G4FQ68DD2 849 aa3.57□□□□□ -1.84
SCAMP1-201ENST00000320280 FAM109BQ6ICB4 259 aaPredicted RBP3.57□□□□□ -1.84
SCAMP1-201ENST00000320280 CYP26C1Q6V0L0 522 aa3.57□□□□□ -1.84
SCAMP1-201ENST00000320280 DPH6Q7L8W6 267 aa3.57□□□□□ -1.84
SCAMP1-201ENST00000320280 FAM228AQ86W67 206 aa3.57□□□□□ -1.84
SCAMP1-201ENST00000320280 RNF149Q8NC42 400 aa3.57□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms