RNA–Protein interactions for RNA: ENST00000316448.9

CALR-201, Transcript of calreticulin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CALR, Length 1,903 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALR-201ENST00000316448 JRKLQ9Y4A0 524 aa16.94■□□□□ 0.3
CALR-201ENST00000316448 PTCH2Q9Y6C5 1203 aa16.94■□□□□ 0.3
CALR-201ENST00000316448 FAM170AA1A519 330 aa16.93■□□□□ 0.3
CALR-201ENST00000316448 BTNL10A8MVZ5 291 aa16.93■□□□□ 0.3
CALR-201ENST00000316448 CYP26A1O43174 497 aa16.93■□□□□ 0.3
CALR-201ENST00000316448 MOCS3O95396 460 aa16.93■□□□□ 0.3
CALR-201ENST00000316448 GNRH1P01148 92 aa16.93■□□□□ 0.3
CALR-201ENST00000316448 CRYBB1P53674 252 aaPredicted RBP16.93■□□□□ 0.3
CALR-201ENST00000316448 MFAP3P55082 362 aa16.93■□□□□ 0.3
CALR-201ENST00000316448 MYL6P60660 151 aa16.93■□□□□ 0.3
CALR-201ENST00000316448 NCOA4Q13772 614 aa16.93■□□□□ 0.3
CALR-201ENST00000316448 DUOXA2Q1HG44 320 aa16.93■□□□□ 0.3
CALR-201ENST00000316448 FBXO38Q6PIJ6 1188 aa16.93■□□□□ 0.3
CALR-201ENST00000316448 PALB2Q86YC2 1186 aa16.93■□□□□ 0.3
CALR-201ENST00000316448 NME8Q8N427 588 aa16.93■□□□□ 0.3
CALR-201ENST00000316448 ALS2CR12Q96Q35 445 aa16.93■□□□□ 0.3
CALR-201ENST00000316448 NAGPAQ9UK23 515 aa16.93■□□□□ 0.3
CALR-201ENST00000316448 SAR1BQ9Y6B6 198 aa16.93■□□□□ 0.3
CALR-201ENST00000316448 RRP9O43818 475 aaKnown RBP16.92■□□□□ 0.3
CALR-201ENST00000316448 ZC3H11AO75152 810 aaKnown RBP eCLIP16.92■□□□□ 0.3
CALR-201ENST00000316448 PHACTR2O75167 634 aa16.92■□□□□ 0.3
CALR-201ENST00000316448 CHRNB2P17787 502 aa16.92■□□□□ 0.3
CALR-201ENST00000316448 USP8P40818 1118 aa16.92■□□□□ 0.3
CALR-201ENST00000316448 BMS1Q14692 1282 aaKnown RBP16.92■□□□□ 0.3
CALR-201ENST00000316448 SURF1Q15526 300 aa16.92■□□□□ 0.3
CALR-201ENST00000316448 NAB2Q15742 525 aa16.92■□□□□ 0.3
CALR-201ENST00000316448 JADE1Q6IE81 842 aa16.92■□□□□ 0.3
CALR-201ENST00000316448 GLYCTKQ8IVS8 523 aa16.92■□□□□ 0.3
CALR-201ENST00000316448 RABGGTAQ92696 567 aa16.92■□□□□ 0.3
CALR-201ENST00000316448 CELF4Q9BZC1 486 aaKnown RBP16.92■□□□□ 0.3
CALR-201ENST00000316448 SAGE1Q9NXZ1 904 aa16.92■□□□□ 0.3
CALR-201ENST00000316448 NOC2LQ9Y3T9 749 aaKnown RBP16.92■□□□□ 0.3
CALR-201ENST00000316448 HES2Q9Y543 173 aa16.92■□□□□ 0.3
CALR-201ENST00000316448 CHRNA1P02708 482 aa16.92■□□□□ 0.3
CALR-201ENST00000316448 ACO1P21399 889 aaKnown RBP16.92■□□□□ 0.3
CALR-201ENST00000316448 GCNT1Q02742 428 aa16.92■□□□□ 0.3
CALR-201ENST00000316448 UBXN11Q5T124 520 aa16.92■□□□□ 0.3
CALR-201ENST00000316448 TAF2Q6P1X5 1199 aa16.92■□□□□ 0.3
CALR-201ENST00000316448 NOP9Q86U38 636 aaKnown RBP16.92■□□□□ 0.3
CALR-201ENST00000316448 SERINC5Q86VE9 423 aa16.92■□□□□ 0.3
CALR-201ENST00000316448 SLC47A2Q86VL8 602 aa16.92■□□□□ 0.3
CALR-201ENST00000316448 CXorf38Q8TB03 319 aa16.92■□□□□ 0.3
CALR-201ENST00000316448 VTI1AQ96AJ9 217 aa16.92■□□□□ 0.3
CALR-201ENST00000316448 NOX5Q96PH1 765 aa16.92■□□□□ 0.3
CALR-201ENST00000316448 SNTG2Q9NY99 539 aa16.92■□□□□ 0.3
CALR-201ENST00000316448 SIX4Q9UIU6 781 aa16.92■□□□□ 0.3
CALR-201ENST00000316448 CDY2AQ9Y6F7 541 aa16.92■□□□□ 0.3
CALR-201ENST00000316448 GRK4P32298 578 aa16.91■□□□□ 0.3
CALR-201ENST00000316448 GRM5P41594 1212 aa16.91■□□□□ 0.3
CALR-201ENST00000316448 GUCY2FP51841 1108 aa16.91■□□□□ 0.3
CALR-201ENST00000316448 ACLYP53396 1101 aa16.91■□□□□ 0.3
CALR-201ENST00000316448 AP3M2P53677 418 aa16.91■□□□□ 0.3
CALR-201ENST00000316448 MRPS6P82932 125 aaKnown RBP16.91■□□□□ 0.3
CALR-201ENST00000316448 WDR44Q5JSH3 913 aa16.91■□□□□ 0.3
CALR-201ENST00000316448 ALKBH5Q6P6C2 394 aaKnown RBP16.91■□□□□ 0.3
CALR-201ENST00000316448 VPS36Q86VN1 386 aa16.91■□□□□ 0.3
CALR-201ENST00000316448 SESTD1Q86VW0 696 aa16.91■□□□□ 0.3
CALR-201ENST00000316448 FAM228AQ86W67 206 aa16.91■□□□□ 0.3
CALR-201ENST00000316448 GPR161Q8N6U8 529 aaKnown RBP16.91■□□□□ 0.3
CALR-201ENST00000316448 U2AF1L4Q8WU68 220 aaKnown RBP16.91■□□□□ 0.3
CALR-201ENST00000316448 PCDHB18PQ96TA0 734 aa16.91■□□□□ 0.3
CALR-201ENST00000316448 AGPAT1Q99943 283 aa16.91■□□□□ 0.3
CALR-201ENST00000316448 XYLT2Q9H1B5 865 aa16.91■□□□□ 0.3
CALR-201ENST00000316448 RNF19AQ9NV58 838 aa16.91■□□□□ 0.3
CALR-201ENST00000316448 TAS2R14Q9NYV8 317 aa16.91■□□□□ 0.3
CALR-201ENST00000316448 PUF60Q9UHX1 559 aaKnown RBP16.91■□□□□ 0.3
CALR-201ENST00000316448 NOCTQ9UK39 431 aaKnown RBP16.91■□□□□ 0.3
CALR-201ENST00000316448 SNX12Q9UMY4 172 aa16.91■□□□□ 0.3
CALR-201ENST00000316448 TRIM17Q9Y577 477 aa16.91■□□□□ 0.3
CALR-201ENST00000316448 PCDHGC5Q9Y5F6 944 aa16.91■□□□□ 0.3
CALR-201ENST00000316448 MROH7Q68CQ1 1323 aa16.91■□□□□ 0.3
CALR-201ENST00000316448 DNAH12Q6ZR08 3092 aa16.91■□□□□ 0.3
CALR-201ENST00000316448 IL18RAPO95256 599 aa16.9■□□□□ 0.3
CALR-201ENST00000316448 ASS1P00966 412 aaKnown RBP16.9■□□□□ 0.3
CALR-201ENST00000316448 ZSCAN20P17040 1043 aaPredicted RBP16.9■□□□□ 0.3
CALR-201ENST00000316448 TUBB4BP68371 445 aa16.9■□□□□ 0.3
CALR-201ENST00000316448 NOP14P78316 857 aaKnown RBP16.9■□□□□ 0.3
CALR-201ENST00000316448 TEX35Q5T0J7 233 aa16.9■□□□□ 0.3
CALR-201ENST00000316448 C1orf127Q8N9H9 656 aa16.9■□□□□ 0.3
CALR-201ENST00000316448 SH3TC2Q8TF17 1288 aa16.9■□□□□ 0.3
CALR-201ENST00000316448 ACAP3Q96P50 834 aa16.9■□□□□ 0.3
CALR-201ENST00000316448 PDCL3Q9H2J4 239 aa16.9■□□□□ 0.3
CALR-201ENST00000316448 C1orf112Q9NSG2 853 aa16.9■□□□□ 0.3
CALR-201ENST00000316448 BRCA2P51587 3418 aa16.9■□□□□ 0.3
CALR-201ENST00000316448 CTSHP09668 335 aa16.9■□□□□ 0.3
CALR-201ENST00000316448 CCDC172P0C7W6 258 aa16.9■□□□□ 0.3
CALR-201ENST00000316448 MGAT3Q09327 533 aa16.9■□□□□ 0.3
CALR-201ENST00000316448 CUL2Q13617 745 aa16.9■□□□□ 0.3
CALR-201ENST00000316448 ITGA7Q13683 1181 aa16.9■□□□□ 0.3
CALR-201ENST00000316448 SLC27A1Q6PCB7 646 aa16.9■□□□□ 0.3
CALR-201ENST00000316448 PCSK9Q8NBP7 692 aaKnown RBP16.9■□□□□ 0.3
CALR-201ENST00000316448 SLAIN1Q8ND83 568 aa16.9■□□□□ 0.3
CALR-201ENST00000316448 EPS8L1Q8TE68 723 aa16.9■□□□□ 0.3
CALR-201ENST00000316448 ADPGKQ9BRR6 497 aa16.9■□□□□ 0.3
CALR-201ENST00000316448 RNF39Q9H2S5 420 aa16.9■□□□□ 0.3
CALR-201ENST00000316448 NXF3Q9H4D5 531 aaKnown RBP16.9■□□□□ 0.3
CALR-201ENST00000316448 MYH10P35580 1976 aa16.89■□□□□ 0.29
CALR-201ENST00000316448 CTAGE15A4D2H0 777 aa16.89■□□□□ 0.29
CALR-201ENST00000316448 TMEM191BP0C7N4 346 aa16.89■□□□□ 0.29
CALR-201ENST00000316448 CTAGE8P0CG41 777 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms