RNA–Protein interactions for RNA: ENST00000312989.11

PPP1CA-201, Transcript of protein phosphatase 1 catalytic subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene PPP1CA, Length 1,389 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CA-201ENST00000312989 RCOR1Q9UKL0 485 aa15.92■□□□□ 0.14
PPP1CA-201ENST00000312989 LACTBL1A8MY62 500 aa15.91■□□□□ 0.14
PPP1CA-201ENST00000312989 ALADP13716 330 aa15.91■□□□□ 0.14
PPP1CA-201ENST00000312989 SP100P23497 879 aaPredicted RBP15.91■□□□□ 0.14
PPP1CA-201ENST00000312989 AARSP49588 968 aaKnown RBP eCLIP15.91■□□□□ 0.14
PPP1CA-201ENST00000312989 GUCY2FP51841 1108 aa15.91■□□□□ 0.14
PPP1CA-201ENST00000312989 EHHADHQ08426 723 aa15.91■□□□□ 0.14
PPP1CA-201ENST00000312989 CES5AQ6NT32 575 aa15.91■□□□□ 0.14
PPP1CA-201ENST00000312989 CNNM4Q6P4Q7 775 aa15.91■□□□□ 0.14
PPP1CA-201ENST00000312989 GLYCTKQ8IVS8 523 aa15.91■□□□□ 0.14
PPP1CA-201ENST00000312989 ZSWIM2Q8NEG5 633 aa15.91■□□□□ 0.14
PPP1CA-201ENST00000312989 BICD1Q96G01 975 aa15.91■□□□□ 0.14
PPP1CA-201ENST00000312989 TRIM9Q9C026 710 aa15.91■□□□□ 0.14
PPP1CA-201ENST00000312989 TNMDQ9H2S6 317 aa15.91■□□□□ 0.14
PPP1CA-201ENST00000312989 BACE2Q9Y5Z0 518 aa15.91■□□□□ 0.14
PPP1CA-201ENST00000312989 PPEF2O14830 753 aa15.9■□□□□ 0.14
PPP1CA-201ENST00000312989 GAP43P17677 238 aa15.9■□□□□ 0.14
PPP1CA-201ENST00000312989 RPL9P32969 192 aaKnown RBP15.9■□□□□ 0.14
PPP1CA-201ENST00000312989 HOXD13P35453 343 aa15.9■□□□□ 0.14
PPP1CA-201ENST00000312989 CREMQ03060 361 aa15.9■□□□□ 0.14
PPP1CA-201ENST00000312989 RAB33AQ14088 237 aa15.9■□□□□ 0.14
PPP1CA-201ENST00000312989 TMEM31Q5JXX7 168 aa15.9■□□□□ 0.14
PPP1CA-201ENST00000312989 ATAT1Q5SQI0 421 aa15.9■□□□□ 0.14
PPP1CA-201ENST00000312989 L1TD1Q5T7N2 865 aaKnown RBP15.9■□□□□ 0.14
PPP1CA-201ENST00000312989 RESP18Q5W5W9 173 aa15.9■□□□□ 0.14
PPP1CA-201ENST00000312989 ATL3Q6DD88 541 aa15.9■□□□□ 0.14
PPP1CA-201ENST00000312989 CEP57Q86XR8 500 aa15.9■□□□□ 0.14
PPP1CA-201ENST00000312989 TMEM87AQ8NBN3 555 aa15.9■□□□□ 0.14
PPP1CA-201ENST00000312989 KREMEN2Q8NCW0 462 aa15.9■□□□□ 0.14
PPP1CA-201ENST00000312989 KCNG4Q8TDN1 519 aa15.9■□□□□ 0.14
PPP1CA-201ENST00000312989 HPS3Q969F9 1004 aa15.9■□□□□ 0.14
PPP1CA-201ENST00000312989 SUSD3Q96L08 255 aa15.9■□□□□ 0.14
PPP1CA-201ENST00000312989 RIPOR3Q96MK2 946 aa15.9■□□□□ 0.14
PPP1CA-201ENST00000312989 MSTO1Q9BUK6 570 aa15.9■□□□□ 0.14
PPP1CA-201ENST00000312989 PLEKHA4Q9H4M7 779 aa15.9■□□□□ 0.14
PPP1CA-201ENST00000312989 TBC1D7Q9P0N9 293 aa15.9■□□□□ 0.14
PPP1CA-201ENST00000312989 CCDC195A0A1B0GUA6 201 aa15.89■□□□□ 0.13
PPP1CA-201ENST00000312989 ZMYND10O75800 440 aa15.89■□□□□ 0.13
PPP1CA-201ENST00000312989 HSP90AA1P07900 732 aaKnown RBP15.89■□□□□ 0.13
PPP1CA-201ENST00000312989 NFICP08651 508 aa15.89■□□□□ 0.13
PPP1CA-201ENST00000312989 CYP3A5P20815 502 aa15.89■□□□□ 0.13
PPP1CA-201ENST00000312989 ACOT2P49753 483 aa15.89■□□□□ 0.13
PPP1CA-201ENST00000312989 SLC8B1Q6J4K2 584 aa15.89■□□□□ 0.13
PPP1CA-201ENST00000312989 EDAQ92838 391 aa15.89■□□□□ 0.13
PPP1CA-201ENST00000312989 DHX58Q96C10 678 aa15.89■□□□□ 0.13
PPP1CA-201ENST00000312989 CUEDC2Q9H467 287 aa15.89■□□□□ 0.13
PPP1CA-201ENST00000312989 WDR6Q9NNW5 1121 aaKnown RBP15.89■□□□□ 0.13
PPP1CA-201ENST00000312989 ZDHHC7Q9NXF8 308 aa15.89■□□□□ 0.13
PPP1CA-201ENST00000312989 USTQ9Y2C2 406 aa15.89■□□□□ 0.13
PPP1CA-201ENST00000312989 PRR33A8MZF0 331 aa15.88■□□□□ 0.13
PPP1CA-201ENST00000312989 M0QZQ0 153 aa15.88■□□□□ 0.13
PPP1CA-201ENST00000312989 SYN3O14994 580 aa15.88■□□□□ 0.13
PPP1CA-201ENST00000312989 CASP1P29466 404 aa15.88■□□□□ 0.13
PPP1CA-201ENST00000312989 ABCD1P33897 745 aa15.88■□□□□ 0.13
PPP1CA-201ENST00000312989 ZXDAP98168 799 aa15.88■□□□□ 0.13
PPP1CA-201ENST00000312989 KYAT1Q16773 422 aa15.88■□□□□ 0.13
PPP1CA-201ENST00000312989 PTPN21Q16825 1174 aa15.88■□□□□ 0.13
PPP1CA-201ENST00000312989 VARS2Q5ST30 1063 aaKnown RBP15.88■□□□□ 0.13
PPP1CA-201ENST00000312989 SPATA1Q5VX52 437 aa15.88■□□□□ 0.13
PPP1CA-201ENST00000312989 CYP26C1Q6V0L0 522 aa15.88■□□□□ 0.13
PPP1CA-201ENST00000312989 EPM2AIP1Q7L775 607 aaPredicted RBP15.88■□□□□ 0.13
PPP1CA-201ENST00000312989 EFCAB13Q8IY85 973 aa15.88■□□□□ 0.13
PPP1CA-201ENST00000312989 ZDHHC14Q8IZN3 488 aa15.88■□□□□ 0.13
PPP1CA-201ENST00000312989 KIF12Q96FN5 646 aa15.88■□□□□ 0.13
PPP1CA-201ENST00000312989 ASIC4Q96FT7 647 aa15.88■□□□□ 0.13
PPP1CA-201ENST00000312989 PRKD2Q9BZL6 878 aa15.88■□□□□ 0.13
PPP1CA-201ENST00000312989 SMOC2Q9H3U7 446 aa15.88■□□□□ 0.13
PPP1CA-201ENST00000312989 MRPL44Q9H9J2 332 aaKnown RBP15.88■□□□□ 0.13
PPP1CA-201ENST00000312989 PANK4Q9NVE7 773 aa15.88■□□□□ 0.13
PPP1CA-201ENST00000312989 UBQLN1Q9UMX0 589 aaKnown RBP15.88■□□□□ 0.13
PPP1CA-201ENST00000312989 CDY1Q9Y6F8 540 aa15.88■□□□□ 0.13
PPP1CA-201ENST00000312989 MYH11P35749 1972 aa15.88■□□□□ 0.13
PPP1CA-201ENST00000312989 TECTAO75443 2155 aa15.88■□□□□ 0.13
PPP1CA-201ENST00000312989 PDCD11Q14690 1871 aaKnown RBP15.88■□□□□ 0.13
PPP1CA-201ENST00000312989 TRIP11Q15643 1979 aa15.88■□□□□ 0.13
PPP1CA-201ENST00000312989 ANO9A1A5B4 782 aa15.87■□□□□ 0.13
PPP1CA-201ENST00000312989 WDR27A2RRH5 827 aa15.87■□□□□ 0.13
PPP1CA-201ENST00000312989 SPTLC1O15269 473 aa15.87■□□□□ 0.13
PPP1CA-201ENST00000312989 IDEP14735 1019 aa15.87■□□□□ 0.13
PPP1CA-201ENST00000312989 COL9A1P20849 921 aa15.87■□□□□ 0.13
PPP1CA-201ENST00000312989 OR1D2P34982 312 aa15.87■□□□□ 0.13
PPP1CA-201ENST00000312989 POU5F1Q01860 360 aaKnown RBP15.87■□□□□ 0.13
PPP1CA-201ENST00000312989 ROR1Q01973 937 aa15.87■□□□□ 0.13
PPP1CA-201ENST00000312989 PPP2R3AQ06190 1150 aa15.87■□□□□ 0.13
PPP1CA-201ENST00000312989 SCARA3Q6AZY7 606 aa15.87■□□□□ 0.13
PPP1CA-201ENST00000312989 JADE1Q6IE81 842 aa15.87■□□□□ 0.13
PPP1CA-201ENST00000312989 PDXDC1Q6P996 788 aa15.87■□□□□ 0.13
PPP1CA-201ENST00000312989 C7orf25Q9BPX7 421 aa15.87■□□□□ 0.13
PPP1CA-201ENST00000312989 RPF1Q9H9Y2 349 aaKnown RBP15.87■□□□□ 0.13
PPP1CA-201ENST00000312989 AGO2Q9UKV8 859 aaKnown RBP15.87■□□□□ 0.13
PPP1CA-201ENST00000312989 C2orf16Q68DN1 1984 aa15.87■□□□□ 0.13
PPP1CA-201ENST00000312989 TRAPPC3O43617 180 aa15.87■□□□□ 0.13
PPP1CA-201ENST00000312989 PRPF6O94906 941 aaKnown RBP15.87■□□□□ 0.13
PPP1CA-201ENST00000312989 ABLIM3O94929 683 aa15.87■□□□□ 0.13
PPP1CA-201ENST00000312989 GCNT3O95395 438 aa15.87■□□□□ 0.13
PPP1CA-201ENST00000312989 VNN2O95498 520 aa15.87■□□□□ 0.13
PPP1CA-201ENST00000312989 POU2F2P09086 479 aa15.87■□□□□ 0.13
PPP1CA-201ENST00000312989 HOXA9P31269 272 aa15.87■□□□□ 0.13
PPP1CA-201ENST00000312989 MATR3P43243 847 aaKnown RBP eCLIP15.87■□□□□ 0.13
PPP1CA-201ENST00000312989 ADALQ6DHV7 355 aa15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms