RNA–Protein interactions for RNA: ENST00000306042.9

PTPRE-202, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 1 (best) BASIC

Gene PTPRE, Length 4,957 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-202ENST00000306042 ZNF214Q9UL59 606 aaPredicted RBP9.84□□□□□ -0.83
PTPRE-202ENST00000306042 PIK3R2O00459 728 aa9.83□□□□□ -0.84
PTPRE-202ENST00000306042 CTNNB1P35222 781 aa9.83□□□□□ -0.84
PTPRE-202ENST00000306042 ACADSBP45954 432 aa9.83□□□□□ -0.84
PTPRE-202ENST00000306042 EPHB3P54753 998 aa9.83□□□□□ -0.84
PTPRE-202ENST00000306042 TFDP2Q14188 446 aa9.83□□□□□ -0.84
PTPRE-202ENST00000306042 FAM171A1Q5VUB5 890 aa9.83□□□□□ -0.84
PTPRE-202ENST00000306042 ZPBP2Q6X784 338 aa9.83□□□□□ -0.84
PTPRE-202ENST00000306042 MAGOHBQ96A72 148 aaKnown RBP9.83□□□□□ -0.84
PTPRE-202ENST00000306042 ZNF558Q96NG5 402 aa9.83□□□□□ -0.84
PTPRE-202ENST00000306042 PANX2Q96RD6 677 aa9.83□□□□□ -0.84
PTPRE-202ENST00000306042 PI4K2AQ9BTU6 479 aa9.83□□□□□ -0.84
PTPRE-202ENST00000306042 RNPEPQ9H4A4 650 aa9.83□□□□□ -0.84
PTPRE-202ENST00000306042 IGFLR1Q9H665 355 aa9.83□□□□□ -0.84
PTPRE-202ENST00000306042 KCNK9Q9NPC2 374 aa9.83□□□□□ -0.84
PTPRE-202ENST00000306042 DYRK4Q9NR20 520 aa9.83□□□□□ -0.84
PTPRE-202ENST00000306042 CNTNAP1P78357 1384 aa9.83□□□□□ -0.84
PTPRE-202ENST00000306042 PLIN4Q96Q06 1357 aa9.83□□□□□ -0.84
PTPRE-202ENST00000306042 ZBED1O96006 694 aa9.83□□□□□ -0.84
PTPRE-202ENST00000306042 FTLP02792 175 aaPredicted RBP9.83□□□□□ -0.84
PTPRE-202ENST00000306042 MYBL1P10243 752 aa9.83□□□□□ -0.84
PTPRE-202ENST00000306042 IRF1P10914 325 aa9.83□□□□□ -0.84
PTPRE-202ENST00000306042 ATF2P15336 505 aa9.83□□□□□ -0.84
PTPRE-202ENST00000306042 PPIGQ13427 754 aaKnown RBP eCLIP9.83□□□□□ -0.84
PTPRE-202ENST00000306042 FBXO47Q5MNV8 452 aa9.83□□□□□ -0.84
PTPRE-202ENST00000306042 USP38Q8NB14 1042 aa9.83□□□□□ -0.84
PTPRE-202ENST00000306042 ZNF296Q8WUU4 475 aaPredicted RBP9.83□□□□□ -0.84
PTPRE-202ENST00000306042 KCNMB3Q9NPA1 279 aa9.83□□□□□ -0.84
PTPRE-202ENST00000306042 KBTBD4Q9NVX7 518 aa9.83□□□□□ -0.84
PTPRE-202ENST00000306042 CYP3A7-CYP3A51PA0A087WV96 503 aa9.83□□□□□ -0.84
PTPRE-202ENST00000306042 IGKV6D-41A0A0C4DH26 115 aa9.83□□□□□ -0.84
PTPRE-202ENST00000306042 SELPP16109 830 aa9.83□□□□□ -0.84
PTPRE-202ENST00000306042 CYP3A7P24462 503 aa9.83□□□□□ -0.84
PTPRE-202ENST00000306042 LHX1P48742 406 aa9.83□□□□□ -0.84
PTPRE-202ENST00000306042 YWHAHQ04917 246 aaPredicted RBP9.83□□□□□ -0.84
PTPRE-202ENST00000306042 ADGRF2Q8IZF7 708 aa9.83□□□□□ -0.84
PTPRE-202ENST00000306042 DHX38Q92620 1227 aaKnown RBP9.83□□□□□ -0.84
PTPRE-202ENST00000306042 RPGRIP1Q96KN7 1286 aa9.83□□□□□ -0.84
PTPRE-202ENST00000306042 OLFML3Q9NRN5 406 aa9.83□□□□□ -0.84
PTPRE-202ENST00000306042 MAPTP10636 758 aaKnown RBP9.83□□□□□ -0.84
PTPRE-202ENST00000306042 CCL5P13501 91 aa9.83□□□□□ -0.84
PTPRE-202ENST00000306042 CD52P31358 61 aa9.83□□□□□ -0.84
PTPRE-202ENST00000306042 CRYBB1P53674 252 aaPredicted RBP9.83□□□□□ -0.84
PTPRE-202ENST00000306042 RWDD2BP57060 319 aa9.83□□□□□ -0.84
PTPRE-202ENST00000306042 CCL14Q16627 93 aa9.83□□□□□ -0.84
PTPRE-202ENST00000306042 C10orf120Q5SQS8 335 aa9.83□□□□□ -0.84
PTPRE-202ENST00000306042 ARHGAP18Q8N392 663 aa9.83□□□□□ -0.84
PTPRE-202ENST00000306042 BBOF1Q8ND07 529 aa9.83□□□□□ -0.84
PTPRE-202ENST00000306042 ENGASEQ8NFI3 743 aa9.83□□□□□ -0.84
PTPRE-202ENST00000306042 PDCD6IPQ8WUM4 868 aaKnown RBP9.83□□□□□ -0.84
PTPRE-202ENST00000306042 SELENOSQ9BQE4 189 aa9.83□□□□□ -0.84
PTPRE-202ENST00000306042 CARD6Q9BX69 1037 aa9.83□□□□□ -0.84
PTPRE-202ENST00000306042 STK33Q9BYT3 514 aa9.83□□□□□ -0.84
PTPRE-202ENST00000306042 PLEKHA4Q9H4M7 779 aa9.83□□□□□ -0.84
PTPRE-202ENST00000306042 CYP4F11Q9HBI6 524 aa9.83□□□□□ -0.84
PTPRE-202ENST00000306042 WDR35Q9P2L0 1181 aa9.83□□□□□ -0.84
PTPRE-202ENST00000306042 SOWAHDA6NJG2 315 aa9.82□□□□□ -0.84
PTPRE-202ENST00000306042 FGBP02675 491 aa9.82□□□□□ -0.84
PTPRE-202ENST00000306042 CKMP06732 381 aa9.82□□□□□ -0.84
PTPRE-202ENST00000306042 ATP5DP30049 168 aa9.82□□□□□ -0.84
PTPRE-202ENST00000306042 PCBP1Q15365 356 aaKnown RBP eCLIP9.82□□□□□ -0.84
PTPRE-202ENST00000306042 OVOS1Q6IE37 1185 aa9.82□□□□□ -0.84
PTPRE-202ENST00000306042 GAD1Q99259 594 aa9.82□□□□□ -0.84
PTPRE-202ENST00000306042 CGRRF1Q99675 332 aa9.82□□□□□ -0.84
PTPRE-202ENST00000306042 DHX35Q9H5Z1 703 aaKnown RBP9.82□□□□□ -0.84
PTPRE-202ENST00000306042 COL22A1Q8NFW1 1626 aaPredicted RBP9.82□□□□□ -0.84
PTPRE-202ENST00000306042 PASKQ96RG2 1323 aa9.82□□□□□ -0.84
PTPRE-202ENST00000306042 SOWAHBA6NEL2 793 aa9.82□□□□□ -0.84
PTPRE-202ENST00000306042 ZBTB39O15060 712 aa9.82□□□□□ -0.84
PTPRE-202ENST00000306042 MAFO75444 373 aaPredicted RBP9.82□□□□□ -0.84
PTPRE-202ENST00000306042 FTCDO95954 541 aa9.82□□□□□ -0.84
PTPRE-202ENST00000306042 KRT3P12035 628 aa9.82□□□□□ -0.84
PTPRE-202ENST00000306042 TAP1Q03518 808 aa9.82□□□□□ -0.84
PTPRE-202ENST00000306042 CCDC15Q0P6D6 951 aa9.82□□□□□ -0.84
PTPRE-202ENST00000306042 ACRBPQ8NEB7 543 aa9.82□□□□□ -0.84
PTPRE-202ENST00000306042 RUNDC3BQ96NL0 473 aa9.82□□□□□ -0.84
PTPRE-202ENST00000306042 GPR20Q99678 358 aa9.82□□□□□ -0.84
PTPRE-202ENST00000306042 EDEM3Q9BZQ6 932 aa9.82□□□□□ -0.84
PTPRE-202ENST00000306042 PARVAQ9NVD7 372 aa9.82□□□□□ -0.84
PTPRE-202ENST00000306042 IP6K2Q9UHH9 426 aa9.82□□□□□ -0.84
PTPRE-202ENST00000306042 NRBP1Q9UHY1 535 aa9.82□□□□□ -0.84
PTPRE-202ENST00000306042 FRMPD4Q14CM0 1322 aa9.82□□□□□ -0.84
PTPRE-202ENST00000306042 A0A1W2PQC6 194 aa9.82□□□□□ -0.84
PTPRE-202ENST00000306042 AP1G2O75843 785 aa9.82□□□□□ -0.84
PTPRE-202ENST00000306042 ZRANB2O95218 330 aaKnown RBP eCLIP9.82□□□□□ -0.84
PTPRE-202ENST00000306042 SMPD1P17405 629 aa9.82□□□□□ -0.84
PTPRE-202ENST00000306042 HARS2P49590 506 aaKnown RBP9.82□□□□□ -0.84
PTPRE-202ENST00000306042 DDX53Q86TM3 631 aaKnown RBP9.82□□□□□ -0.84
PTPRE-202ENST00000306042 WDR49Q8IV35 697 aa9.82□□□□□ -0.84
PTPRE-202ENST00000306042 RIN2Q8WYP3 895 aaPredicted RBP9.82□□□□□ -0.84
PTPRE-202ENST00000306042 LENG1Q96BZ8 264 aaPredicted RBP9.82□□□□□ -0.84
PTPRE-202ENST00000306042 RBM41Q96IZ5 413 aaKnown RBP9.82□□□□□ -0.84
PTPRE-202ENST00000306042 TEPSINQ96N21 525 aa9.82□□□□□ -0.84
PTPRE-202ENST00000306042 EPAS1Q99814 870 aa9.82□□□□□ -0.84
PTPRE-202ENST00000306042 ASB7Q9H672 318 aa9.82□□□□□ -0.84
PTPRE-202ENST00000306042 SP110Q9HB58 689 aa9.82□□□□□ -0.84
PTPRE-202ENST00000306042 ZMYND8Q9ULU4 1186 aaPredicted RBP9.82□□□□□ -0.84
PTPRE-202ENST00000306042 PCDHB2Q9Y5E7 798 aa9.82□□□□□ -0.84
PTPRE-202ENST00000306042 KRT7P08729 469 aa9.82□□□□□ -0.84
PTPRE-202ENST00000306042 SULT1E1P49888 294 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms