RNA–Protein interactions for RNA: ENST00000302528.11

CLIP1-201, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

APPRIS P4 TSL 5 BASIC

Gene CLIP1, Length 5,833 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-201ENST00000302528 TASP1Q9H6P5 420 aa10.9□□□□□ -0.67
CLIP1-201ENST00000302528 V9GYQ6 96 aa10.9□□□□□ -0.67
CLIP1-201ENST00000302528 STXBP3O00186 592 aa10.89□□□□□ -0.67
CLIP1-201ENST00000302528 KCNN4O15554 427 aa10.89□□□□□ -0.67
CLIP1-201ENST00000302528 MAP3K13O43283 966 aa10.89□□□□□ -0.67
CLIP1-201ENST00000302528 STRNO43815 780 aa10.89□□□□□ -0.67
CLIP1-201ENST00000302528 ITGAXP20702 1163 aa10.89□□□□□ -0.67
CLIP1-201ENST00000302528 MZF1P28698 734 aaPredicted RBP10.89□□□□□ -0.67
CLIP1-201ENST00000302528 PLA2G4AP47712 749 aa10.89□□□□□ -0.67
CLIP1-201ENST00000302528 TAP1Q03518 808 aa10.89□□□□□ -0.67
CLIP1-201ENST00000302528 TRIM32Q13049 653 aa10.89□□□□□ -0.67
CLIP1-201ENST00000302528 STAT4Q14765 748 aa10.89□□□□□ -0.67
CLIP1-201ENST00000302528 TRIM16LQ309B1 348 aa10.89□□□□□ -0.67
CLIP1-201ENST00000302528 NLRP10Q86W26 655 aa10.89□□□□□ -0.67
CLIP1-201ENST00000302528 C1orf131Q8NDD1 294 aaKnown RBP10.89□□□□□ -0.67
CLIP1-201ENST00000302528 RANBP17Q9H2T7 1088 aaKnown RBP10.89□□□□□ -0.67
CLIP1-201ENST00000302528 PCDHA6Q9UN73 950 aa10.89□□□□□ -0.67
CLIP1-201ENST00000302528 CDYLQ9Y232 598 aa10.89□□□□□ -0.67
CLIP1-201ENST00000302528 PCDHA8Q9Y5H6 950 aa10.89□□□□□ -0.67
CLIP1-201ENST00000302528 PREX2Q70Z35 1606 aa10.89□□□□□ -0.67
CLIP1-201ENST00000302528 LINC00854A0A1B0GVQ3 168 aa10.89□□□□□ -0.67
CLIP1-201ENST00000302528 SNTNA6NMZ2 147 aa10.89□□□□□ -0.67
CLIP1-201ENST00000302528 SH2B2O14492 632 aaPredicted RBP10.89□□□□□ -0.67
CLIP1-201ENST00000302528 AIM2O14862 343 aa10.89□□□□□ -0.67
CLIP1-201ENST00000302528 TRIM13O60858 407 aa10.89□□□□□ -0.67
CLIP1-201ENST00000302528 RFX3P48380 749 aa10.89□□□□□ -0.67
CLIP1-201ENST00000302528 RGS4P49798 205 aa10.89□□□□□ -0.67
CLIP1-201ENST00000302528 KCNH2Q12809 1159 aa10.89□□□□□ -0.67
CLIP1-201ENST00000302528 TRIP10Q15642 601 aa10.89□□□□□ -0.67
CLIP1-201ENST00000302528 TSC22D1Q15714 1073 aa10.89□□□□□ -0.67
CLIP1-201ENST00000302528 PTRHD1Q6GMV3 140 aaKnown RBP10.89□□□□□ -0.67
CLIP1-201ENST00000302528 TRIM72Q6ZMU5 477 aa10.89□□□□□ -0.67
CLIP1-201ENST00000302528 LCORLQ8N3X6 602 aa10.89□□□□□ -0.67
CLIP1-201ENST00000302528 CHAMP1Q96JM3 812 aa10.89□□□□□ -0.67
CLIP1-201ENST00000302528 LBHD1Q9BQE6 289 aaPredicted RBP10.89□□□□□ -0.67
CLIP1-201ENST00000302528 MRPL4Q9BYD3 311 aaKnown RBP10.89□□□□□ -0.67
CLIP1-201ENST00000302528 INTS2Q9H0H0 1204 aaKnown RBP10.89□□□□□ -0.67
CLIP1-201ENST00000302528 PARVAQ9NVD7 372 aa10.89□□□□□ -0.67
CLIP1-201ENST00000302528 ADCY10Q96PN6 1610 aa10.89□□□□□ -0.67
CLIP1-201ENST00000302528 USP17L3A6NCW0 530 aa10.89□□□□□ -0.67
CLIP1-201ENST00000302528 USP17L4A6NCW7 530 aa10.89□□□□□ -0.67
CLIP1-201ENST00000302528 NCK2O43639 380 aa10.89□□□□□ -0.67
CLIP1-201ENST00000302528 PRKAB2O43741 272 aa10.89□□□□□ -0.67
CLIP1-201ENST00000302528 IFNAR1P17181 557 aa10.89□□□□□ -0.67
CLIP1-201ENST00000302528 RGS2P41220 211 aa10.89□□□□□ -0.67
CLIP1-201ENST00000302528 ATP12AP54707 1039 aa10.89□□□□□ -0.67
CLIP1-201ENST00000302528 BTKQ06187 659 aa10.89□□□□□ -0.67
CLIP1-201ENST00000302528 LAMB3Q13751 1172 aa10.89□□□□□ -0.67
CLIP1-201ENST00000302528 C11orf88Q6PI97 169 aa10.89□□□□□ -0.67
CLIP1-201ENST00000302528 USP17L1Q7RTZ2 530 aa10.89□□□□□ -0.67
CLIP1-201ENST00000302528 HS6ST3Q8IZP7 471 aa10.89□□□□□ -0.67
CLIP1-201ENST00000302528 PROM2Q8N271 834 aa10.89□□□□□ -0.67
CLIP1-201ENST00000302528 RSPH1Q8WYR4 309 aa10.89□□□□□ -0.67
CLIP1-201ENST00000302528 KIF12Q96FN5 646 aa10.89□□□□□ -0.67
CLIP1-201ENST00000302528 PUS3Q9BZE2 481 aaKnown RBP10.89□□□□□ -0.67
CLIP1-201ENST00000302528 TBC1D22BQ9NU19 505 aa10.89□□□□□ -0.67
CLIP1-201ENST00000302528 ABHD10Q9NUJ1 306 aa10.89□□□□□ -0.67
CLIP1-201ENST00000302528 CDC42BPAQ5VT25 1732 aa10.89□□□□□ -0.67
CLIP1-201ENST00000302528 POTEFA5A3E0 1075 aa10.89□□□□□ -0.67
CLIP1-201ENST00000302528 TCP11X1B4DZS4 312 aa10.89□□□□□ -0.67
CLIP1-201ENST00000302528 CFAP99D6REC4 459 aa10.89□□□□□ -0.67
CLIP1-201ENST00000302528 PGK2P07205 417 aa10.89□□□□□ -0.67
CLIP1-201ENST00000302528 KLC1Q07866 573 aa10.89□□□□□ -0.67
CLIP1-201ENST00000302528 TTLL4Q14679 1199 aa10.89□□□□□ -0.67
CLIP1-201ENST00000302528 FAM45BPQ6NSW5 357 aa10.89□□□□□ -0.67
CLIP1-201ENST00000302528 NFRKBQ6P4R8 1299 aa10.89□□□□□ -0.67
CLIP1-201ENST00000302528 TNIP3Q96KP6 325 aa10.89□□□□□ -0.67
CLIP1-201ENST00000302528 OSBPL9Q96SU4 736 aa10.89□□□□□ -0.67
CLIP1-201ENST00000302528 APOL5Q9BWW9 433 aa10.89□□□□□ -0.67
CLIP1-201ENST00000302528 GGT7Q9UJ14 662 aa10.89□□□□□ -0.67
CLIP1-201ENST00000302528 ARL2BPQ9Y2Y0 163 aa10.89□□□□□ -0.67
CLIP1-201ENST00000302528 MTRF1O75570 445 aaKnown RBP10.89□□□□□ -0.67
CLIP1-201ENST00000302528 GGPS1O95749 300 aa10.89□□□□□ -0.67
CLIP1-201ENST00000302528 ALBP02768 609 aa10.89□□□□□ -0.67
CLIP1-201ENST00000302528 CYP21A2P08686 494 aa10.89□□□□□ -0.67
CLIP1-201ENST00000302528 MYL2P10916 166 aa10.89□□□□□ -0.67
CLIP1-201ENST00000302528 FGFR4P22455 802 aa10.89□□□□□ -0.67
CLIP1-201ENST00000302528 SOX6P35712 828 aa10.89□□□□□ -0.67
CLIP1-201ENST00000302528 HIST2H2ACQ16777 129 aaPredicted RBP10.89□□□□□ -0.67
CLIP1-201ENST00000302528 HIST2H2AA3Q6FI13 130 aa10.89□□□□□ -0.67
CLIP1-201ENST00000302528 CIAPIN1Q6FI81 312 aa10.89□□□□□ -0.67
CLIP1-201ENST00000302528 AHI1Q8N157 1196 aa10.89□□□□□ -0.67
CLIP1-201ENST00000302528 USP33Q8TEY7 942 aa10.89□□□□□ -0.67
CLIP1-201ENST00000302528 ZNF668Q96K58 619 aaPredicted RBP10.89□□□□□ -0.67
CLIP1-201ENST00000302528 ORAI2Q96SN7 254 aa10.89□□□□□ -0.67
CLIP1-201ENST00000302528 TSEN34Q9BSV6 310 aaKnown RBP10.89□□□□□ -0.67
CLIP1-201ENST00000302528 IL1RL2Q9HB29 575 aa10.89□□□□□ -0.67
CLIP1-201ENST00000302528 NPHS2Q9NP85 383 aa10.89□□□□□ -0.67
CLIP1-201ENST00000302528 RIC8BQ9NVN3 520 aa10.89□□□□□ -0.67
CLIP1-201ENST00000302528 RCOR1Q9UKL0 485 aa10.89□□□□□ -0.67
CLIP1-201ENST00000302528 ARHGEF10O15013 1369 aa10.89□□□□□ -0.67
CLIP1-201ENST00000302528 MYOM2P54296 1465 aa10.88□□□□□ -0.67
CLIP1-201ENST00000302528 KIF1CO43896 1103 aaKnown RBP10.88□□□□□ -0.67
CLIP1-201ENST00000302528 BBOX1O75936 387 aa10.88□□□□□ -0.67
CLIP1-201ENST00000302528 CIAO1O76071 339 aa10.88□□□□□ -0.67
CLIP1-201ENST00000302528 FLT3P36888 993 aa10.88□□□□□ -0.67
CLIP1-201ENST00000302528 KRT76Q01546 638 aa10.88□□□□□ -0.67
CLIP1-201ENST00000302528 DRAP1Q14919 205 aaPredicted RBP10.88□□□□□ -0.67
CLIP1-201ENST00000302528 TERF2Q15554 542 aa10.88□□□□□ -0.67
CLIP1-201ENST00000302528 ANKS6Q68DC2 871 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms