RNA–Protein interactions for RNA: ENST00000301935.9

UBXN1-202, Transcript of UBX domain protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene UBXN1, Length 1,153 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-202ENST00000301935 KYAT1Q16773 422 aa16.44■□□□□ 0.22
UBXN1-202ENST00000301935 FILIP1Q7Z7B0 1213 aa16.44■□□□□ 0.22
UBXN1-202ENST00000301935 ZBTB33Q86T24 672 aa16.44■□□□□ 0.22
UBXN1-202ENST00000301935 ZNF598Q86UK7 904 aaKnown RBP16.44■□□□□ 0.22
UBXN1-202ENST00000301935 ZC3H3Q8IXZ2 948 aaKnown RBP16.44■□□□□ 0.22
UBXN1-202ENST00000301935 ANKRD20A12PQ8NF67 263 aa16.44■□□□□ 0.22
UBXN1-202ENST00000301935 HELQQ8TDG4 1101 aa16.44■□□□□ 0.22
UBXN1-202ENST00000301935 ACO2Q99798 780 aaKnown RBP16.44■□□□□ 0.22
UBXN1-202ENST00000301935 DUSP9Q99956 384 aaKnown RBP16.44■□□□□ 0.22
UBXN1-202ENST00000301935 MRPL9Q9BYD2 267 aaKnown RBP16.44■□□□□ 0.22
UBXN1-202ENST00000301935 CDH22Q9UJ99 828 aa16.44■□□□□ 0.22
UBXN1-202ENST00000301935 DENND4AQ7Z401 1863 aa16.44■□□□□ 0.22
UBXN1-202ENST00000301935 CNTNAP2Q9UHC6 1331 aa16.44■□□□□ 0.22
UBXN1-202ENST00000301935 ZMYM2Q9UBW7 1377 aa16.43■□□□□ 0.22
UBXN1-202ENST00000301935 C2orf71A6NGG8 1288 aa16.43■□□□□ 0.22
UBXN1-202ENST00000301935 EOMESO95936 686 aa16.43■□□□□ 0.22
UBXN1-202ENST00000301935 NR3C1P04150 777 aa16.43■□□□□ 0.22
UBXN1-202ENST00000301935 FGFR4P22455 802 aa16.43■□□□□ 0.22
UBXN1-202ENST00000301935 AVPR2P30518 371 aa16.43■□□□□ 0.22
UBXN1-202ENST00000301935 NCAPHQ15003 741 aa16.43■□□□□ 0.22
UBXN1-202ENST00000301935 ARMCX5Q6P1M9 558 aa16.43■□□□□ 0.22
UBXN1-202ENST00000301935 CATSPER4Q7RTX7 472 aa16.43■□□□□ 0.22
UBXN1-202ENST00000301935 LUZP1Q86V48 1076 aa16.43■□□□□ 0.22
UBXN1-202ENST00000301935 MRPL43Q8N983 215 aaKnown RBP16.43■□□□□ 0.22
UBXN1-202ENST00000301935 CCDC51Q96ER9 411 aa16.43■□□□□ 0.22
UBXN1-202ENST00000301935 NECTIN4Q96NY8 510 aa16.43■□□□□ 0.22
UBXN1-202ENST00000301935 MKNK1Q9BUB5 465 aa16.43■□□□□ 0.22
UBXN1-202ENST00000301935 SRRTQ9BXP5 876 aaKnown RBP16.43■□□□□ 0.22
UBXN1-202ENST00000301935 RBSNQ9H1K0 784 aa16.43■□□□□ 0.22
UBXN1-202ENST00000301935 POMKQ9H5K3 350 aa16.43■□□□□ 0.22
UBXN1-202ENST00000301935 CHST12Q9NRB3 414 aa16.43■□□□□ 0.22
UBXN1-202ENST00000301935 DMAC2Q9NW81 257 aa16.43■□□□□ 0.22
UBXN1-202ENST00000301935 MAGEC2Q9UBF1 373 aaPredicted RBP16.43■□□□□ 0.22
UBXN1-202ENST00000301935 TNFSF13BQ9Y275 285 aa16.43■□□□□ 0.22
UBXN1-202ENST00000301935 FRMD4BQ9Y2L6 1034 aa16.43■□□□□ 0.22
UBXN1-202ENST00000301935 NR2E1Q9Y466 385 aa16.43■□□□□ 0.22
UBXN1-202ENST00000301935 ZDBF2Q9HCK1 2354 aa16.42■□□□□ 0.22
UBXN1-202ENST00000301935 MYO15AQ9UKN7 3530 aa16.42■□□□□ 0.22
UBXN1-202ENST00000301935 N4BP3O15049 544 aa16.42■□□□□ 0.22
UBXN1-202ENST00000301935 MAPK13O15264 365 aa16.42■□□□□ 0.22
UBXN1-202ENST00000301935 SLC16A3O15427 465 aaKnown RBP16.42■□□□□ 0.22
UBXN1-202ENST00000301935 CLDN3O15551 220 aa16.42■□□□□ 0.22
UBXN1-202ENST00000301935 NR2F2P24468 414 aa16.42■□□□□ 0.22
UBXN1-202ENST00000301935 PMS1P54277 932 aaKnown RBP16.42■□□□□ 0.22
UBXN1-202ENST00000301935 POU5F1Q01860 360 aaKnown RBP16.42■□□□□ 0.22
UBXN1-202ENST00000301935 ITIH3Q06033 890 aa16.42■□□□□ 0.22
UBXN1-202ENST00000301935 AMHR2Q16671 573 aa16.42■□□□□ 0.22
UBXN1-202ENST00000301935 TMEM132AQ24JP5 1023 aa16.42■□□□□ 0.22
UBXN1-202ENST00000301935 ATF7IP2Q5U623 682 aa16.42■□□□□ 0.22
UBXN1-202ENST00000301935 CES5AQ6NT32 575 aa16.42■□□□□ 0.22
UBXN1-202ENST00000301935 POMGNT1Q8WZA1 660 aa16.42■□□□□ 0.22
UBXN1-202ENST00000301935 MED15Q96RN5 788 aa16.42■□□□□ 0.22
UBXN1-202ENST00000301935 ADPGKQ9BRR6 497 aa16.42■□□□□ 0.22
UBXN1-202ENST00000301935 ADAM7Q9H2U9 754 aa16.42■□□□□ 0.22
UBXN1-202ENST00000301935 MINDY3Q9H8M7 445 aa16.42■□□□□ 0.22
UBXN1-202ENST00000301935 METTL14Q9HCE5 456 aaKnown RBP16.42■□□□□ 0.22
UBXN1-202ENST00000301935 PLXNA3P51805 1871 aa16.42■□□□□ 0.22
UBXN1-202ENST00000301935 A0A1B0GUA9 196 aa16.41■□□□□ 0.22
UBXN1-202ENST00000301935 TRIM49BA6NDI0 452 aa16.41■□□□□ 0.22
UBXN1-202ENST00000301935 C2CD4DB7Z1M9 353 aa16.41■□□□□ 0.22
UBXN1-202ENST00000301935 CLASP2O75122 1294 aaKnown RBP16.41■□□□□ 0.22
UBXN1-202ENST00000301935 PDGFBP01127 241 aaPredicted RBP16.41■□□□□ 0.22
UBXN1-202ENST00000301935 CDK11BP21127 795 aaKnown RBP16.41■□□□□ 0.22
UBXN1-202ENST00000301935 EEF1GP26641 437 aaKnown RBP16.41■□□□□ 0.22
UBXN1-202ENST00000301935 PSMC2P35998 433 aaKnown RBP16.41■□□□□ 0.22
UBXN1-202ENST00000301935 BCAR1P56945 870 aa16.41■□□□□ 0.22
UBXN1-202ENST00000301935 ENPEPQ07075 957 aa16.41■□□□□ 0.22
UBXN1-202ENST00000301935 MCL1Q07820 350 aa16.41■□□□□ 0.22
UBXN1-202ENST00000301935 MTMR3Q13615 1198 aa16.41■□□□□ 0.22
UBXN1-202ENST00000301935 NOTUMQ6P988 496 aa16.41■□□□□ 0.22
UBXN1-202ENST00000301935 MPZL3Q6UWV2 235 aa16.41■□□□□ 0.22
UBXN1-202ENST00000301935 XXYLT1Q8NBI6 393 aa16.41■□□□□ 0.22
UBXN1-202ENST00000301935 KREMEN2Q8NCW0 462 aa16.41■□□□□ 0.22
UBXN1-202ENST00000301935 RNF214Q8ND24 703 aa16.41■□□□□ 0.22
UBXN1-202ENST00000301935 RSPH1Q8WYR4 309 aa16.41■□□□□ 0.22
UBXN1-202ENST00000301935 TMEM169Q96HH4 297 aa16.41■□□□□ 0.22
UBXN1-202ENST00000301935 RIPOR3Q96MK2 946 aa16.41■□□□□ 0.22
UBXN1-202ENST00000301935 TCHPQ9BT92 498 aa16.41■□□□□ 0.22
UBXN1-202ENST00000301935 TARS2Q9BW92 718 aaKnown RBP16.41■□□□□ 0.22
UBXN1-202ENST00000301935 FAM86C1Q9NVL1 165 aa16.41■□□□□ 0.22
UBXN1-202ENST00000301935 FANCLQ9NW38 375 aa16.41■□□□□ 0.22
UBXN1-202ENST00000301935 SORCS3Q9UPU3 1222 aa16.41■□□□□ 0.22
UBXN1-202ENST00000301935 A0A0B4J269 797 aa16.4■□□□□ 0.22
UBXN1-202ENST00000301935 NT5C1B-RDH14C9J2C7 533 aa16.4■□□□□ 0.22
UBXN1-202ENST00000301935 ANKRD63C9JTQ0 380 aa16.4■□□□□ 0.22
UBXN1-202ENST00000301935 CLIC2O15247 247 aa16.4■□□□□ 0.22
UBXN1-202ENST00000301935 TSPAN1O60635 241 aa16.4■□□□□ 0.22
UBXN1-202ENST00000301935 CSDE1O75534 798 aaKnown RBP16.4■□□□□ 0.22
UBXN1-202ENST00000301935 TPM2P07951 284 aa16.4■□□□□ 0.22
UBXN1-202ENST00000301935 MCF2P10911 925 aa16.4■□□□□ 0.22
UBXN1-202ENST00000301935 EPB41P11171 864 aaKnown RBP16.4■□□□□ 0.22
UBXN1-202ENST00000301935 PROZP22891 400 aa16.4■□□□□ 0.22
UBXN1-202ENST00000301935 CA8P35219 290 aa16.4■□□□□ 0.22
UBXN1-202ENST00000301935 MATR3P43243 847 aaKnown RBP eCLIP16.4■□□□□ 0.22
UBXN1-202ENST00000301935 ALDH7A1P49419 539 aaKnown RBP16.4■□□□□ 0.22
UBXN1-202ENST00000301935 MARSP56192 900 aaKnown RBP16.4■□□□□ 0.22
UBXN1-202ENST00000301935 PPP2R3AQ06190 1150 aa16.4■□□□□ 0.22
UBXN1-202ENST00000301935 DCAF4L1Q3SXM0 396 aa16.4■□□□□ 0.22
UBXN1-202ENST00000301935 CDKAL1Q5VV42 579 aa16.4■□□□□ 0.22
UBXN1-202ENST00000301935 FRMD5Q7Z6J6 570 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms