RNA–Protein interactions for RNA: ENST00000300862.7

HIF3A-204, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene HIF3A, Length 2,551 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-204ENST00000300862 OSBPL7Q9BZF2 842 aa13.76□□□□□ -0.21
HIF3A-204ENST00000300862 LRRC19Q9H756 370 aa13.76□□□□□ -0.21
HIF3A-204ENST00000300862 ATP6V0A4Q9HBG4 840 aa13.76□□□□□ -0.21
HIF3A-204ENST00000300862 AAASQ9NRG9 546 aa13.76□□□□□ -0.21
HIF3A-204ENST00000300862 ARHGAP28Q9P2N2 729 aa13.76□□□□□ -0.21
HIF3A-204ENST00000300862 ANKFY1Q9P2R3 1169 aa13.76□□□□□ -0.21
HIF3A-204ENST00000300862 PARP2Q9UGN5 583 aa13.76□□□□□ -0.21
HIF3A-204ENST00000300862 MCM8Q9UJA3 840 aa13.76□□□□□ -0.21
HIF3A-204ENST00000300862 ZNF214Q9UL59 606 aaPredicted RBP13.76□□□□□ -0.21
HIF3A-204ENST00000300862 RASGRF2O14827 1237 aa13.76□□□□□ -0.21
HIF3A-204ENST00000300862 FSCN2O14926 492 aa13.76□□□□□ -0.21
HIF3A-204ENST00000300862 RARGP13631 454 aa13.76□□□□□ -0.21
HIF3A-204ENST00000300862 GTF2H1P32780 548 aa13.76□□□□□ -0.21
HIF3A-204ENST00000300862 SSR1P43307 286 aaKnown RBP13.76□□□□□ -0.21
HIF3A-204ENST00000300862 GCNT1Q02742 428 aa13.76□□□□□ -0.21
HIF3A-204ENST00000300862 USP37Q86T82 979 aa13.76□□□□□ -0.21
HIF3A-204ENST00000300862 CCDC50Q8IVM0 306 aa13.76□□□□□ -0.21
HIF3A-204ENST00000300862 MCPH1Q8NEM0 835 aa13.76□□□□□ -0.21
HIF3A-204ENST00000300862 CCDC114Q96M63 670 aa13.76□□□□□ -0.21
HIF3A-204ENST00000300862 CDC42EP4Q9H3Q1 356 aaKnown RBP13.76□□□□□ -0.21
HIF3A-204ENST00000300862 USTQ9Y2C2 406 aa13.76□□□□□ -0.21
HIF3A-204ENST00000300862 UMODL1Q5DID0 1318 aa13.75□□□□□ -0.21
HIF3A-204ENST00000300862 ZNF541Q9H0D2 1346 aa13.75□□□□□ -0.21
HIF3A-204ENST00000300862 PCNTO95613 3336 aa13.75□□□□□ -0.21
HIF3A-204ENST00000300862 LRRIQ4A6NIV6 560 aa13.75□□□□□ -0.21
HIF3A-204ENST00000300862 CREB1P16220 341 aa13.75□□□□□ -0.21
HIF3A-204ENST00000300862 GARTP22102 1010 aa13.75□□□□□ -0.21
HIF3A-204ENST00000300862 DSG3P32926 999 aa13.75□□□□□ -0.21
HIF3A-204ENST00000300862 MMP13P45452 471 aa13.75□□□□□ -0.21
HIF3A-204ENST00000300862 NSFP46459 744 aaKnown RBP13.75□□□□□ -0.21
HIF3A-204ENST00000300862 POLGP54098 1239 aaPredicted RBP13.75□□□□□ -0.21
HIF3A-204ENST00000300862 DRP2Q13474 957 aa13.75□□□□□ -0.21
HIF3A-204ENST00000300862 AUHQ13825 339 aaKnown RBP13.75□□□□□ -0.21
HIF3A-204ENST00000300862 WDR44Q5JSH3 913 aa13.75□□□□□ -0.21
HIF3A-204ENST00000300862 TMEM270Q6UE05 265 aa13.75□□□□□ -0.21
HIF3A-204ENST00000300862 C15orf39Q6ZRI6 1047 aa13.75□□□□□ -0.21
HIF3A-204ENST00000300862 CCDC121Q6ZUS5 278 aa13.75□□□□□ -0.21
HIF3A-204ENST00000300862 CACNA2D3Q8IZS8 1091 aa13.75□□□□□ -0.21
HIF3A-204ENST00000300862 REPS2Q8NFH8 660 aa13.75□□□□□ -0.21
HIF3A-204ENST00000300862 ASAP3Q8TDY4 903 aa13.75□□□□□ -0.21
HIF3A-204ENST00000300862 CHMP6Q96FZ7 201 aa13.75□□□□□ -0.21
HIF3A-204ENST00000300862 PRMT1Q99873 361 aaKnown RBP13.75□□□□□ -0.21
HIF3A-204ENST00000300862 FAM129AQ9BZQ8 928 aa13.75□□□□□ -0.21
HIF3A-204ENST00000300862 TAOK3Q9H2K8 898 aa13.75□□□□□ -0.21
HIF3A-204ENST00000300862 CNOT10Q9H9A5 744 aaKnown RBP13.75□□□□□ -0.21
HIF3A-204ENST00000300862 APOBEC3GQ9HC16 384 aaKnown RBP13.75□□□□□ -0.21
HIF3A-204ENST00000300862 KLHL11Q9NVR0 708 aa13.75□□□□□ -0.21
HIF3A-204ENST00000300862 PPP1R1BQ9UD71 204 aaPredicted RBP13.75□□□□□ -0.21
HIF3A-204ENST00000300862 PCDHB2Q9Y5E7 798 aa13.75□□□□□ -0.21
HIF3A-204ENST00000300862 GOLGA6L7A0A1B0GV03 622 aa13.75□□□□□ -0.21
HIF3A-204ENST00000300862 DNM1LO00429 736 aa13.75□□□□□ -0.21
HIF3A-204ENST00000300862 EXTL3O43909 919 aa13.75□□□□□ -0.21
HIF3A-204ENST00000300862 VNN1O95497 513 aa13.75□□□□□ -0.21
HIF3A-204ENST00000300862 RALAP11233 206 aa13.75□□□□□ -0.21
HIF3A-204ENST00000300862 ATP4AP20648 1035 aa13.75□□□□□ -0.21
HIF3A-204ENST00000300862 GMPSP49915 693 aaPredicted RBP13.75□□□□□ -0.21
HIF3A-204ENST00000300862 MCCD1P59942 119 aaPredicted RBP13.75□□□□□ -0.21
HIF3A-204ENST00000300862 EMC2Q15006 297 aa13.75□□□□□ -0.21
HIF3A-204ENST00000300862 LRRC14Q15048 493 aa13.75□□□□□ -0.21
HIF3A-204ENST00000300862 ZACNQ401N2 412 aa13.75□□□□□ -0.21
HIF3A-204ENST00000300862 GKAP1Q5VSY0 366 aaPredicted RBP13.75□□□□□ -0.21
HIF3A-204ENST00000300862 ABHD15Q6UXT9 468 aa13.75□□□□□ -0.21
HIF3A-204ENST00000300862 ZNF280CQ8ND82 737 aa13.75□□□□□ -0.21
HIF3A-204ENST00000300862 RDM1Q8NG50 284 aa13.75□□□□□ -0.21
HIF3A-204ENST00000300862 MGARPQ8TDB4 240 aa13.75□□□□□ -0.21
HIF3A-204ENST00000300862 ATXN2LQ8WWM7 1075 aaKnown RBP13.75□□□□□ -0.21
HIF3A-204ENST00000300862 SENP7Q9BQF6 1050 aa13.75□□□□□ -0.21
HIF3A-204ENST00000300862 PLCD4Q9BRC7 762 aa13.75□□□□□ -0.21
HIF3A-204ENST00000300862 TARS2Q9BW92 718 aaKnown RBP13.75□□□□□ -0.21
HIF3A-204ENST00000300862 C17orf75Q9HAS0 396 aa13.75□□□□□ -0.21
HIF3A-204ENST00000300862 CYP39A1Q9NYL5 469 aa13.75□□□□□ -0.21
HIF3A-204ENST00000300862 DONSONQ9NYP3 566 aa13.75□□□□□ -0.21
HIF3A-204ENST00000300862 CTNNAL1Q9UBT7 734 aa13.75□□□□□ -0.21
HIF3A-204ENST00000300862 AGO2Q9UKV8 859 aaKnown RBP13.75□□□□□ -0.21
HIF3A-204ENST00000300862 C4BPAP04003 597 aaKnown RBP13.74□□□□□ -0.21
HIF3A-204ENST00000300862 PTPRAP18433 802 aa13.74□□□□□ -0.21
HIF3A-204ENST00000300862 TAS2R40P59535 323 aa13.74□□□□□ -0.21
HIF3A-204ENST00000300862 PRKG1Q13976 671 aa13.74□□□□□ -0.21
HIF3A-204ENST00000300862 SLMAPQ14BN4 828 aa13.74□□□□□ -0.21
HIF3A-204ENST00000300862 C6orf118Q5T5N4 469 aa13.74□□□□□ -0.21
HIF3A-204ENST00000300862 CRELD2Q6UXH1 353 aaPredicted RBP13.74□□□□□ -0.21
HIF3A-204ENST00000300862 ANKS1BQ7Z6G8 1248 aa13.74□□□□□ -0.21
HIF3A-204ENST00000300862 DEFB132Q7Z7B7 95 aa13.74□□□□□ -0.21
HIF3A-204ENST00000300862 RPAINQ86UA6 219 aa13.74□□□□□ -0.21
HIF3A-204ENST00000300862 FAM228AQ86W67 206 aa13.74□□□□□ -0.21
HIF3A-204ENST00000300862 C12orf50Q8NA57 414 aaPredicted RBP13.74□□□□□ -0.21
HIF3A-204ENST00000300862 DDX27Q96GQ7 796 aaKnown RBP13.74□□□□□ -0.21
HIF3A-204ENST00000300862 MLXIPLQ9NP71 852 aa13.74□□□□□ -0.21
HIF3A-204ENST00000300862 INTS9Q9NV88 658 aaKnown RBP13.74□□□□□ -0.21
HIF3A-204ENST00000300862 PCDHB4Q9Y5E5 795 aa13.74□□□□□ -0.21
HIF3A-204ENST00000300862 WDR81Q562E7 1941 aa13.74□□□□□ -0.21
HIF3A-204ENST00000300862 EDN1P05305 212 aa13.74□□□□□ -0.21
HIF3A-204ENST00000300862 CD58P19256 250 aa13.74□□□□□ -0.21
HIF3A-204ENST00000300862 CDR1P51861 262 aa13.74□□□□□ -0.21
HIF3A-204ENST00000300862 ITGA8P53708 1063 aa13.74□□□□□ -0.21
HIF3A-204ENST00000300862 ADCY2Q08462 1091 aa13.74□□□□□ -0.21
HIF3A-204ENST00000300862 NEDD9Q14511 834 aa13.74□□□□□ -0.21
HIF3A-204ENST00000300862 ANKRD20A8PQ5CZ79 823 aa13.74□□□□□ -0.21
HIF3A-204ENST00000300862 WLSQ5T9L3 541 aa13.74□□□□□ -0.21
HIF3A-204ENST00000300862 OR5B17Q8NGF7 314 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms