RNA–Protein interactions for RNA: ENST00000300590.7

SNX20-201, Transcript of sorting nexin 20, humanhuman

TSL 2 BASIC

Gene SNX20, Length 3,304 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX20-201ENST00000300590 CYP2W1Q8TAV3 490 aa11.65□□□□□ -0.54
SNX20-201ENST00000300590 CLPTM1LQ96KA5 538 aa11.65□□□□□ -0.54
SNX20-201ENST00000300590 TRAIPQ9BWF2 469 aa11.65□□□□□ -0.54
SNX20-201ENST00000300590 LRRC4BQ9NT99 713 aa11.65□□□□□ -0.54
SNX20-201ENST00000300590 GALNT8Q9NY28 637 aa11.65□□□□□ -0.54
SNX20-201ENST00000300590 USTQ9Y2C2 406 aa11.65□□□□□ -0.54
SNX20-201ENST00000300590 SBDSQ9Y3A5 250 aaKnown RBP eCLIP11.65□□□□□ -0.54
SNX20-201ENST00000300590 ADGRA3Q8IWK6 1321 aa11.65□□□□□ -0.54
SNX20-201ENST00000300590 COL4A1P02462 1669 aa11.65□□□□□ -0.54
SNX20-201ENST00000300590 GGPS1O95749 300 aa11.65□□□□□ -0.54
SNX20-201ENST00000300590 TROVE2P10155 538 aaKnown RBP eCLIP11.65□□□□□ -0.54
SNX20-201ENST00000300590 KRT4P19013 534 aa11.65□□□□□ -0.54
SNX20-201ENST00000300590 IVDP26440 423 aa11.65□□□□□ -0.54
SNX20-201ENST00000300590 NOP14P78316 857 aaKnown RBP11.65□□□□□ -0.54
SNX20-201ENST00000300590 MTMR2Q13614 643 aa11.65□□□□□ -0.54
SNX20-201ENST00000300590 P3H1Q32P28 736 aa11.65□□□□□ -0.54
SNX20-201ENST00000300590 ANKMY2Q8IV38 441 aa11.65□□□□□ -0.54
SNX20-201ENST00000300590 SYT2Q8N9I0 419 aaPredicted RBP11.65□□□□□ -0.54
SNX20-201ENST00000300590 MAML1Q92585 1016 aa11.65□□□□□ -0.54
SNX20-201ENST00000300590 NMD3Q96D46 503 aaKnown RBP11.65□□□□□ -0.54
SNX20-201ENST00000300590 IFT43Q96FT9 208 aa11.65□□□□□ -0.54
SNX20-201ENST00000300590 TRAPPC9Q96Q05 1148 aa11.65□□□□□ -0.54
SNX20-201ENST00000300590 ZNF184Q99676 751 aaPredicted RBP11.65□□□□□ -0.54
SNX20-201ENST00000300590 SYT11Q9BT88 431 aa11.65□□□□□ -0.54
SNX20-201ENST00000300590 KRT82Q9NSB4 513 aa11.65□□□□□ -0.54
SNX20-201ENST00000300590 KLHL11Q9NVR0 708 aa11.65□□□□□ -0.54
SNX20-201ENST00000300590 ANAPC7Q9UJX3 599 aa11.65□□□□□ -0.54
SNX20-201ENST00000300590 RABGAP1Q9Y3P9 1069 aa11.65□□□□□ -0.54
SNX20-201ENST00000300590 EMSYQ7Z589 1322 aa11.65□□□□□ -0.54
SNX20-201ENST00000300590 PNMA6FA0A0J9YX94 578 aa11.65□□□□□ -0.55
SNX20-201ENST00000300590 A6NJR5 290 aa11.65□□□□□ -0.55
SNX20-201ENST00000300590 SPATA31C1P0DKV0 1188 aa11.65□□□□□ -0.55
SNX20-201ENST00000300590 PGM1P36871 562 aa11.65□□□□□ -0.55
SNX20-201ENST00000300590 STAT4Q14765 748 aa11.65□□□□□ -0.55
SNX20-201ENST00000300590 WDR72Q3MJ13 1102 aa11.65□□□□□ -0.55
SNX20-201ENST00000300590 PCNX4Q63HM2 1172 aa11.65□□□□□ -0.55
SNX20-201ENST00000300590 INTS5Q6P9B9 1019 aaKnown RBP11.65□□□□□ -0.55
SNX20-201ENST00000300590 ZNF804AQ7Z570 1209 aa11.65□□□□□ -0.55
SNX20-201ENST00000300590 ERMNQ8TAM6 284 aa11.65□□□□□ -0.55
SNX20-201ENST00000300590 BICD1Q96G01 975 aa11.65□□□□□ -0.55
SNX20-201ENST00000300590 MKNK1Q9BUB5 465 aa11.65□□□□□ -0.55
SNX20-201ENST00000300590 LRRC19Q9H756 370 aa11.65□□□□□ -0.55
SNX20-201ENST00000300590 CCDC160A6NGH7 325 aa11.64□□□□□ -0.55
SNX20-201ENST00000300590 PFDN1O60925 122 aa11.64□□□□□ -0.55
SNX20-201ENST00000300590 SSTR3P32745 418 aaPredicted RBP11.64□□□□□ -0.55
SNX20-201ENST00000300590 ZNF76P36508 570 aa11.64□□□□□ -0.55
SNX20-201ENST00000300590 PDK4Q16654 411 aa11.64□□□□□ -0.55
SNX20-201ENST00000300590 CYP1B1Q16678 543 aa11.64□□□□□ -0.55
SNX20-201ENST00000300590 ZNF568Q3ZCX4 644 aa11.64□□□□□ -0.55
SNX20-201ENST00000300590 USH1GQ495M9 461 aa11.64□□□□□ -0.55
SNX20-201ENST00000300590 NOP9Q86U38 636 aaKnown RBP11.64□□□□□ -0.55
SNX20-201ENST00000300590 GATA6Q92908 595 aa11.64□□□□□ -0.55
SNX20-201ENST00000300590 VCX3BQ9H321 246 aa11.64□□□□□ -0.55
SNX20-201ENST00000300590 SYNCQ9H7C4 482 aa11.64□□□□□ -0.55
SNX20-201ENST00000300590 VCX3AQ9NNX9 186 aa11.64□□□□□ -0.55
SNX20-201ENST00000300590 DMAP1Q9NPF5 467 aaPredicted RBP11.64□□□□□ -0.55
SNX20-201ENST00000300590 ETNK2Q9NVF9 386 aa11.64□□□□□ -0.55
SNX20-201ENST00000300590 TAS2R1Q9NYW7 299 aa11.64□□□□□ -0.55
SNX20-201ENST00000300590 PCDHA1Q9Y5I3 950 aa11.64□□□□□ -0.55
SNX20-201ENST00000300590 SLC16A3O15427 465 aaKnown RBP11.64□□□□□ -0.55
SNX20-201ENST00000300590 BMP3P12645 472 aa11.64□□□□□ -0.55
SNX20-201ENST00000300590 EEF2P13639 858 aaKnown RBP11.64□□□□□ -0.55
SNX20-201ENST00000300590 ETS1P14921 441 aa11.64□□□□□ -0.55
SNX20-201ENST00000300590 AKR1B1P15121 316 aa11.64□□□□□ -0.55
SNX20-201ENST00000300590 OCRLQ01968 901 aa11.64□□□□□ -0.55
SNX20-201ENST00000300590 FAM178BQ8IXR5 827 aa11.64□□□□□ -0.55
SNX20-201ENST00000300590 SH3TC2Q8TF17 1288 aa11.64□□□□□ -0.55
SNX20-201ENST00000300590 NSL1Q96IY1 281 aa11.64□□□□□ -0.55
SNX20-201ENST00000300590 ANO3Q9BYT9 981 aa11.64□□□□□ -0.55
SNX20-201ENST00000300590 GTPBP10A4D1E9 387 aaKnown RBP11.63□□□□□ -0.55
SNX20-201ENST00000300590 TXNDC9O14530 226 aa11.63□□□□□ -0.55
SNX20-201ENST00000300590 HNRNPRO43390 633 aaKnown RBP11.63□□□□□ -0.55
SNX20-201ENST00000300590 IFNB1P01574 187 aa11.63□□□□□ -0.55
SNX20-201ENST00000300590 RALAP11233 206 aa11.63□□□□□ -0.55
SNX20-201ENST00000300590 MAPK4P31152 587 aa11.63□□□□□ -0.55
SNX20-201ENST00000300590 ARFIP2P53365 341 aa11.63□□□□□ -0.55
SNX20-201ENST00000300590 LARP7Q4G0J3 582 aaKnown RBP eCLIP11.63□□□□□ -0.55
SNX20-201ENST00000300590 SLC45A4Q5BKX6 768 aa11.63□□□□□ -0.55
SNX20-201ENST00000300590 HYIQ5T013 277 aa11.63□□□□□ -0.55
SNX20-201ENST00000300590 FAM182AQ5T1J6 154 aa11.63□□□□□ -0.55
SNX20-201ENST00000300590 CCDC62Q6P9F0 684 aa11.63□□□□□ -0.55
SNX20-201ENST00000300590 ZBED8Q8IZ13 594 aa11.63□□□□□ -0.55
SNX20-201ENST00000300590 PTPRN2Q92932 1015 aa11.63□□□□□ -0.55
SNX20-201ENST00000300590 HAUS1Q96CS2 278 aa11.63□□□□□ -0.55
SNX20-201ENST00000300590 DNAJC1Q96KC8 554 aaKnown RBP11.63□□□□□ -0.55
SNX20-201ENST00000300590 PLVAPQ9BX97 442 aa11.63□□□□□ -0.55
SNX20-201ENST00000300590 MAK16Q9BXY0 300 aaKnown RBP11.63□□□□□ -0.55
SNX20-201ENST00000300590 CLIC5Q9NZA1 410 aa11.63□□□□□ -0.55
SNX20-201ENST00000300590 B2RBV5 119 aa11.63□□□□□ -0.55
SNX20-201ENST00000300590 H3BRJ5 948 aa11.63□□□□□ -0.55
SNX20-201ENST00000300590 STK10O94804 968 aaKnown RBP11.63□□□□□ -0.55
SNX20-201ENST00000300590 HOXA7P31268 230 aaPredicted RBP11.63□□□□□ -0.55
SNX20-201ENST00000300590 KDSRQ06136 332 aa11.63□□□□□ -0.55
SNX20-201ENST00000300590 NR1H3Q13133 447 aa11.63□□□□□ -0.55
SNX20-201ENST00000300590 ODR4Q5SWX8 454 aa11.63□□□□□ -0.55
SNX20-201ENST00000300590 OLFML2BQ68BL8 750 aa11.63□□□□□ -0.55
SNX20-201ENST00000300590 GLIS1Q8NBF1 620 aa11.63□□□□□ -0.55
SNX20-201ENST00000300590 HIPK4Q8NE63 616 aa11.63□□□□□ -0.55
SNX20-201ENST00000300590 ATL2Q8NHH9 583 aa11.63□□□□□ -0.55
SNX20-201ENST00000300590 FNBP1Q96RU3 617 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms