RNA–Protein interactions for RNA: ENST00000299866.12

TVP23A-201, Transcript of trans-golgi network vesicle protein 23 homolog A, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TVP23A, Length 3,360 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23A-201ENST00000299866 PLS3P13797 630 aa13.83□□□□□ -0.2
TVP23A-201ENST00000299866 TAL1P17542 331 aaPredicted RBP13.83□□□□□ -0.2
TVP23A-201ENST00000299866 CETN2P41208 172 aa13.83□□□□□ -0.2
TVP23A-201ENST00000299866 PIK3CAP42336 1068 aa13.83□□□□□ -0.2
TVP23A-201ENST00000299866 SEPT7Q16181 437 aaKnown RBP13.83□□□□□ -0.2
TVP23A-201ENST00000299866 QRICH1Q2TAL8 776 aa13.83□□□□□ -0.2
TVP23A-201ENST00000299866 MORC4Q8TE76 937 aa13.83□□□□□ -0.2
TVP23A-201ENST00000299866 P2RX7Q99572 595 aaKnown RBP13.83□□□□□ -0.2
TVP23A-201ENST00000299866 SLAIN2Q9P270 581 aa13.83□□□□□ -0.2
TVP23A-201ENST00000299866 HEY2Q9UBP5 337 aa13.83□□□□□ -0.2
TVP23A-201ENST00000299866 ITGB4P16144 1822 aa13.83□□□□□ -0.2
TVP23A-201ENST00000299866 TISP43B9A030 160 aa13.83□□□□□ -0.2
TVP23A-201ENST00000299866 GSC2O15499 205 aa13.83□□□□□ -0.2
TVP23A-201ENST00000299866 ECE2O60344 883 aa13.83□□□□□ -0.2
TVP23A-201ENST00000299866 CCDC22O60826 627 aa13.83□□□□□ -0.2
TVP23A-201ENST00000299866 POTEJP0CG39 1038 aa13.83□□□□□ -0.2
TVP23A-201ENST00000299866 SLC45A4Q5BKX6 768 aa13.83□□□□□ -0.2
TVP23A-201ENST00000299866 PPM1KQ8N3J5 372 aa13.83□□□□□ -0.2
TVP23A-201ENST00000299866 ATL2Q8NHH9 583 aa13.83□□□□□ -0.2
TVP23A-201ENST00000299866 LMO3Q8TAP4 145 aa13.83□□□□□ -0.2
TVP23A-201ENST00000299866 GRK7Q8WTQ7 553 aa13.83□□□□□ -0.2
TVP23A-201ENST00000299866 BTBD10Q9BSF8 475 aa13.83□□□□□ -0.2
TVP23A-201ENST00000299866 ANAPC7Q9UJX3 599 aa13.83□□□□□ -0.2
TVP23A-201ENST00000299866 FAM86B1E9PN63 330 aa13.82□□□□□ -0.2
TVP23A-201ENST00000299866 TRAFD1O14545 582 aaPredicted RBP13.82□□□□□ -0.2
TVP23A-201ENST00000299866 SORBS3O60504 671 aa13.82□□□□□ -0.2
TVP23A-201ENST00000299866 HAUS5O94927 633 aa13.82□□□□□ -0.2
TVP23A-201ENST00000299866 FAM86B2P0C5J1 330 aa13.82□□□□□ -0.2
TVP23A-201ENST00000299866 SLURP2P0DP57 97 aa13.82□□□□□ -0.2
TVP23A-201ENST00000299866 GAP43P17677 238 aa13.82□□□□□ -0.2
TVP23A-201ENST00000299866 OCRLQ01968 901 aa13.82□□□□□ -0.2
TVP23A-201ENST00000299866 CAV1Q03135 178 aa13.82□□□□□ -0.2
TVP23A-201ENST00000299866 THOC5Q13769 683 aaKnown RBP13.82□□□□□ -0.2
TVP23A-201ENST00000299866 MAPK6Q16659 721 aa13.82□□□□□ -0.2
TVP23A-201ENST00000299866 KBTBD2Q8IY47 623 aa13.82□□□□□ -0.2
TVP23A-201ENST00000299866 PDCD7Q8N8D1 485 aaKnown RBP13.82□□□□□ -0.2
TVP23A-201ENST00000299866 EPS8L1Q8TE68 723 aa13.82□□□□□ -0.2
TVP23A-201ENST00000299866 SH3TC2Q8TF17 1288 aa13.82□□□□□ -0.2
TVP23A-201ENST00000299866 PRR11Q96HE9 360 aaPredicted RBP13.82□□□□□ -0.2
TVP23A-201ENST00000299866 MKNK1Q9BUB5 465 aa13.82□□□□□ -0.2
TVP23A-201ENST00000299866 PARVGQ9HBI0 331 aa13.82□□□□□ -0.2
TVP23A-201ENST00000299866 OLFML3Q9NRN5 406 aa13.82□□□□□ -0.2
TVP23A-201ENST00000299866 KIF13BQ9NQT8 1826 aa13.82□□□□□ -0.2
TVP23A-201ENST00000299866 ZNF76P36508 570 aa13.82□□□□□ -0.2
TVP23A-201ENST00000299866 NEK3P51956 506 aa13.82□□□□□ -0.2
TVP23A-201ENST00000299866 PPP3CAQ08209 521 aa13.82□□□□□ -0.2
TVP23A-201ENST00000299866 FASTKD3Q14CZ7 662 aaKnown RBP13.82□□□□□ -0.2
TVP23A-201ENST00000299866 P3H1Q32P28 736 aa13.82□□□□□ -0.2
TVP23A-201ENST00000299866 ODR4Q5SWX8 454 aa13.82□□□□□ -0.2
TVP23A-201ENST00000299866 PCNX4Q63HM2 1172 aa13.82□□□□□ -0.2
TVP23A-201ENST00000299866 ZNF526Q8TF50 670 aaPredicted RBP13.82□□□□□ -0.2
TVP23A-201ENST00000299866 RPGRQ92834 1020 aaKnown RBP13.82□□□□□ -0.2
TVP23A-201ENST00000299866 SLCO2A1Q92959 643 aa13.82□□□□□ -0.2
TVP23A-201ENST00000299866 BICD1Q96G01 975 aa13.82□□□□□ -0.2
TVP23A-201ENST00000299866 OCEL1Q9H607 264 aa13.82□□□□□ -0.2
TVP23A-201ENST00000299866 SNHG28P0DPA3 235 aa13.82□□□□□ -0.2
TVP23A-201ENST00000299866 TROVE2P10155 538 aaKnown RBP eCLIP13.82□□□□□ -0.2
TVP23A-201ENST00000299866 ETS2P15036 469 aa13.82□□□□□ -0.2
TVP23A-201ENST00000299866 GCAP28676 217 aa13.82□□□□□ -0.2
TVP23A-201ENST00000299866 MAPK4P31152 587 aa13.82□□□□□ -0.2
TVP23A-201ENST00000299866 CPA2P48052 419 aa13.82□□□□□ -0.2
TVP23A-201ENST00000299866 DYNC1I2Q13409 638 aaKnown RBP13.82□□□□□ -0.2
TVP23A-201ENST00000299866 USH1GQ495M9 461 aa13.82□□□□□ -0.2
TVP23A-201ENST00000299866 C2CD6Q53TS8 623 aa13.82□□□□□ -0.2
TVP23A-201ENST00000299866 FAM81AQ8TBF8 368 aa13.82□□□□□ -0.2
TVP23A-201ENST00000299866 TMX4Q9H1E5 349 aaPredicted RBP13.82□□□□□ -0.2
TVP23A-201ENST00000299866 TLE6Q9H808 572 aa13.82□□□□□ -0.2
TVP23A-201ENST00000299866 FBXO6Q9NRD1 293 aaPredicted RBP13.82□□□□□ -0.2
TVP23A-201ENST00000299866 EURLQ9NYK6 297 aa13.82□□□□□ -0.2
TVP23A-201ENST00000299866 C2CD2LO14523 706 aa13.81□□□□□ -0.2
TVP23A-201ENST00000299866 ZBED4O75132 1171 aa13.81□□□□□ -0.2
TVP23A-201ENST00000299866 CETN1Q12798 172 aa13.81□□□□□ -0.2
TVP23A-201ENST00000299866 RINLQ6ZS11 566 aa13.81□□□□□ -0.2
TVP23A-201ENST00000299866 NBPF5PQ86XG9 351 aaPredicted RBP13.81□□□□□ -0.2
TVP23A-201ENST00000299866 DYDC2Q96IM9 177 aa13.81□□□□□ -0.2
TVP23A-201ENST00000299866 CFAP57Q96MR6 1250 aa13.81□□□□□ -0.2
TVP23A-201ENST00000299866 ZBTB12Q9Y330 459 aaPredicted RBP13.81□□□□□ -0.2
TVP23A-201ENST00000299866 MROH7Q68CQ1 1323 aa13.81□□□□□ -0.2
TVP23A-201ENST00000299866 GOLGA8RI6L899 631 aa13.81□□□□□ -0.2
TVP23A-201ENST00000299866 EIF3DO15371 548 aaKnown RBP eCLIP13.81□□□□□ -0.2
TVP23A-201ENST00000299866 MSH4O15457 936 aa13.81□□□□□ -0.2
TVP23A-201ENST00000299866 RALAP11233 206 aa13.81□□□□□ -0.2
TVP23A-201ENST00000299866 BMP3P12645 472 aa13.81□□□□□ -0.2
TVP23A-201ENST00000299866 MUTP22033 750 aa13.81□□□□□ -0.2
TVP23A-201ENST00000299866 ADRA1DP25100 572 aa13.81□□□□□ -0.2
TVP23A-201ENST00000299866 CTC1Q2NKJ3 1217 aa13.81□□□□□ -0.2
TVP23A-201ENST00000299866 EPC2Q52LR7 807 aa13.81□□□□□ -0.2
TVP23A-201ENST00000299866 GATA6Q92908 595 aa13.81□□□□□ -0.2
TVP23A-201ENST00000299866 KLF6Q99612 283 aaPredicted RBP13.81□□□□□ -0.2
TVP23A-201ENST00000299866 SYNCQ9H7C4 482 aa13.81□□□□□ -0.2
TVP23A-201ENST00000299866 SAR1AQ9NR31 198 aa13.81□□□□□ -0.2
TVP23A-201ENST00000299866 LNPEPQ9UIQ6 1025 aa13.81□□□□□ -0.2
TVP23A-201ENST00000299866 C2orf71A6NGG8 1288 aa13.8□□□□□ -0.2
TVP23A-201ENST00000299866 KRT4P19013 534 aa13.8□□□□□ -0.2
TVP23A-201ENST00000299866 MCL1Q07820 350 aa13.8□□□□□ -0.2
TVP23A-201ENST00000299866 LLGL2Q6P1M3 1020 aa13.8□□□□□ -0.2
TVP23A-201ENST00000299866 ZNF720Q7Z2F6 126 aa13.8□□□□□ -0.2
TVP23A-201ENST00000299866 NSL1Q96IY1 281 aa13.8□□□□□ -0.2
TVP23A-201ENST00000299866 NDNQ99608 321 aa13.8□□□□□ -0.2
TVP23A-201ENST00000299866 MAK16Q9BXY0 300 aaKnown RBP13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms