RNA–Protein interactions for RNA: ENST00000266546.10

CLSTN3-201, Transcript of calsyntenin 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CLSTN3, Length 4,185 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-201ENST00000266546 PYROXD1Q8WU10 500 aa12.23□□□□□ -0.45
CLSTN3-201ENST00000266546 C12orf42Q96LP6 360 aa12.23□□□□□ -0.45
CLSTN3-201ENST00000266546 SH3GL2Q99962 352 aa12.23□□□□□ -0.45
CLSTN3-201ENST00000266546 NUP85Q9BW27 656 aa12.23□□□□□ -0.45
CLSTN3-201ENST00000266546 KCNH7Q9NS40 1196 aa12.23□□□□□ -0.45
CLSTN3-201ENST00000266546 TRPC6Q9Y210 931 aa12.23□□□□□ -0.45
CLSTN3-201ENST00000266546 L3MBTL1Q9Y468 752 aa12.23□□□□□ -0.45
CLSTN3-201ENST00000266546 F8VZ95 297 aa12.23□□□□□ -0.45
CLSTN3-201ENST00000266546 PPP1R11O60927 126 aaPredicted RBP12.23□□□□□ -0.45
CLSTN3-201ENST00000266546 HADHQ16836 314 aaKnown RBP12.23□□□□□ -0.45
CLSTN3-201ENST00000266546 CATSPERGQ6ZRH7 1159 aa12.23□□□□□ -0.45
CLSTN3-201ENST00000266546 FBXO25Q8TCJ0 367 aa12.23□□□□□ -0.45
CLSTN3-201ENST00000266546 MORC4Q8TE76 937 aa12.23□□□□□ -0.45
CLSTN3-201ENST00000266546 POMGNT1Q8WZA1 660 aa12.23□□□□□ -0.45
CLSTN3-201ENST00000266546 TAAR1Q96RJ0 339 aa12.23□□□□□ -0.45
CLSTN3-201ENST00000266546 MMP19Q99542 508 aa12.23□□□□□ -0.45
CLSTN3-201ENST00000266546 INTS2Q9H0H0 1204 aaKnown RBP12.23□□□□□ -0.45
CLSTN3-201ENST00000266546 MRPL47Q9HD33 250 aaKnown RBP12.23□□□□□ -0.45
CLSTN3-201ENST00000266546 SEPT9Q9UHD8 586 aaPredicted RBP12.23□□□□□ -0.45
CLSTN3-201ENST00000266546 PJA2O43164 708 aa12.23□□□□□ -0.45
CLSTN3-201ENST00000266546 CREB3O43889 395 aa12.23□□□□□ -0.45
CLSTN3-201ENST00000266546 GCLMP48507 274 aa12.23□□□□□ -0.45
CLSTN3-201ENST00000266546 ITGB3BPQ13352 177 aaPredicted RBP12.23□□□□□ -0.45
CLSTN3-201ENST00000266546 BBS9Q3SYG4 887 aa12.23□□□□□ -0.45
CLSTN3-201ENST00000266546 LARP7Q4G0J3 582 aaKnown RBP eCLIP12.23□□□□□ -0.45
CLSTN3-201ENST00000266546 CATSPER3Q86XQ3 398 aa12.23□□□□□ -0.45
CLSTN3-201ENST00000266546 CD302Q8IX05 232 aa12.23□□□□□ -0.45
CLSTN3-201ENST00000266546 DNERQ8NFT8 737 aa12.23□□□□□ -0.45
CLSTN3-201ENST00000266546 DNAJC9Q8WXX5 260 aa12.23□□□□□ -0.45
CLSTN3-201ENST00000266546 ZBTB10Q96DT7 871 aa12.23□□□□□ -0.45
CLSTN3-201ENST00000266546 SLC9A2Q9UBY0 812 aa12.23□□□□□ -0.45
CLSTN3-201ENST00000266546 UBE4BO95155 1302 aa12.23□□□□□ -0.45
CLSTN3-201ENST00000266546 TNFRSF8P28908 595 aa12.22□□□□□ -0.45
CLSTN3-201ENST00000266546 MAPK7Q13164 816 aa12.22□□□□□ -0.45
CLSTN3-201ENST00000266546 TMEM154Q6P9G4 183 aa12.22□□□□□ -0.45
CLSTN3-201ENST00000266546 ZBTB8OSQ8IWT0 167 aa12.22□□□□□ -0.45
CLSTN3-201ENST00000266546 GSDMBQ8TAX9 411 aa12.22□□□□□ -0.45
CLSTN3-201ENST00000266546 SLC5A5Q92911 643 aa12.22□□□□□ -0.45
CLSTN3-201ENST00000266546 TTC17Q96AE7 1141 aa12.22□□□□□ -0.45
CLSTN3-201ENST00000266546 PDCD2LQ9BRP1 358 aa12.22□□□□□ -0.45
CLSTN3-201ENST00000266546 ANKEF1Q9NU02 776 aa12.22□□□□□ -0.45
CLSTN3-201ENST00000266546 LAMB1P07942 1786 aa12.22□□□□□ -0.45
CLSTN3-201ENST00000266546 KRT1P04264 644 aa12.22□□□□□ -0.45
CLSTN3-201ENST00000266546 TMEM253P0C7T8 217 aa12.22□□□□□ -0.45
CLSTN3-201ENST00000266546 KCNJ1P48048 391 aa12.22□□□□□ -0.45
CLSTN3-201ENST00000266546 MAP3K10Q02779 954 aa12.22□□□□□ -0.45
CLSTN3-201ENST00000266546 STAT4Q14765 748 aa12.22□□□□□ -0.45
CLSTN3-201ENST00000266546 CDCA5Q96FF9 252 aa12.22□□□□□ -0.45
CLSTN3-201ENST00000266546 STK33Q9BYT3 514 aa12.22□□□□□ -0.45
CLSTN3-201ENST00000266546 PPARGC1AQ9UBK2 798 aaKnown RBP12.22□□□□□ -0.45
CLSTN3-201ENST00000266546 FAF1Q9UNN5 650 aaPredicted RBP12.22□□□□□ -0.45
CLSTN3-201ENST00000266546 ALG6Q9Y672 507 aa12.22□□□□□ -0.45
CLSTN3-201ENST00000266546 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.22□□□□□ -0.45
CLSTN3-201ENST00000266546 SRRM3A6NNA2 597 aaPredicted RBP12.22□□□□□ -0.45
CLSTN3-201ENST00000266546 NFIBO00712 420 aa12.22□□□□□ -0.45
CLSTN3-201ENST00000266546 HNRNPDLO14979 420 aaKnown RBP12.22□□□□□ -0.45
CLSTN3-201ENST00000266546 PPIL2Q13356 520 aa12.22□□□□□ -0.45
CLSTN3-201ENST00000266546 PPP2R5CQ13362 524 aa12.22□□□□□ -0.45
CLSTN3-201ENST00000266546 TAF12Q16514 161 aa12.22□□□□□ -0.45
CLSTN3-201ENST00000266546 KYNUQ16719 465 aa12.22□□□□□ -0.45
CLSTN3-201ENST00000266546 EPS8L3Q8TE67 593 aaKnown RBP12.22□□□□□ -0.45
CLSTN3-201ENST00000266546 KAT2BQ92831 832 aa12.22□□□□□ -0.45
CLSTN3-201ENST00000266546 TTC25Q96NG3 672 aa12.22□□□□□ -0.45
CLSTN3-201ENST00000266546 AGPAT1Q99943 283 aa12.22□□□□□ -0.45
CLSTN3-201ENST00000266546 LBHD1Q9BQE6 289 aaPredicted RBP12.22□□□□□ -0.45
CLSTN3-201ENST00000266546 JPH1Q9HDC5 661 aaPredicted RBP12.22□□□□□ -0.45
CLSTN3-201ENST00000266546 IRAK4Q9NWZ3 460 aa12.22□□□□□ -0.45
CLSTN3-201ENST00000266546 TTC7AQ9ULT0 858 aaPredicted RBP12.22□□□□□ -0.45
CLSTN3-201ENST00000266546 C15orf41Q9Y2V0 281 aa12.22□□□□□ -0.45
CLSTN3-201ENST00000266546 COL4A1P02462 1669 aa12.22□□□□□ -0.45
CLSTN3-201ENST00000266546 AGPSO00116 658 aa12.22□□□□□ -0.45
CLSTN3-201ENST00000266546 PPFIA2O75334 1257 aa12.22□□□□□ -0.45
CLSTN3-201ENST00000266546 ITGA4P13612 1032 aa12.22□□□□□ -0.45
CLSTN3-201ENST00000266546 GTF2A2P52657 109 aa12.22□□□□□ -0.45
CLSTN3-201ENST00000266546 ARFIP2P53365 341 aa12.22□□□□□ -0.45
CLSTN3-201ENST00000266546 SLC35G1Q2M3R5 365 aa12.22□□□□□ -0.45
CLSTN3-201ENST00000266546 HP1BP3Q5SSJ5 553 aaPredicted RBP12.22□□□□□ -0.45
CLSTN3-201ENST00000266546 TMC3Q7Z5M5 1100 aa12.22□□□□□ -0.45
CLSTN3-201ENST00000266546 IQCKQ8N0W5 287 aa12.22□□□□□ -0.45
CLSTN3-201ENST00000266546 PDIK1LQ8N165 341 aa12.22□□□□□ -0.45
CLSTN3-201ENST00000266546 MREGQ8N565 214 aa12.22□□□□□ -0.45
CLSTN3-201ENST00000266546 KIAA0895Q8NCT3 520 aa12.22□□□□□ -0.45
CLSTN3-201ENST00000266546 MOV10L1Q9BXT6 1211 aaKnown RBP12.22□□□□□ -0.45
CLSTN3-201ENST00000266546 GLIS2Q9BZE0 524 aaPredicted RBP12.22□□□□□ -0.45
CLSTN3-201ENST00000266546 MROH8Q9H579 483 aa12.22□□□□□ -0.45
CLSTN3-201ENST00000266546 KMT5AQ9NQR1 393 aa12.22□□□□□ -0.45
CLSTN3-201ENST00000266546 PXMP2Q9NR77 195 aa12.22□□□□□ -0.45
CLSTN3-201ENST00000266546 NVLO15381 856 aaKnown RBP12.21□□□□□ -0.45
CLSTN3-201ENST00000266546 CTCFP49711 727 aaPredicted RBP12.21□□□□□ -0.45
CLSTN3-201ENST00000266546 LIG4P49917 911 aa12.21□□□□□ -0.45
CLSTN3-201ENST00000266546 MKRN4PQ13434 485 aaPredicted RBP12.21□□□□□ -0.45
CLSTN3-201ENST00000266546 SIAH1Q8IUQ4 282 aa12.21□□□□□ -0.45
CLSTN3-201ENST00000266546 C9orf72Q96LT7 481 aa12.21□□□□□ -0.45
CLSTN3-201ENST00000266546 FAM161BQ96MY7 647 aa12.21□□□□□ -0.45
CLSTN3-201ENST00000266546 PNMA5Q96PV4 448 aa12.21□□□□□ -0.45
CLSTN3-201ENST00000266546 DLGAP2Q9P1A6 1054 aa12.21□□□□□ -0.45
CLSTN3-201ENST00000266546 LRRC37AA6NMS7 1700 aa12.21□□□□□ -0.45
CLSTN3-201ENST00000266546 MYH6P13533 1939 aa12.21□□□□□ -0.45
CLSTN3-201ENST00000266546 LRRIQ4A6NIV6 560 aa12.21□□□□□ -0.45
CLSTN3-201ENST00000266546 ASAP2O43150 1006 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms