RNA–Protein interactions for RNA: ENST00000263511.8

CROCCP3-201, Transcript of ciliary rootlet coiled-coil, rootletin pseudogene 3, humanhuman

TSL 1 (best) BASIC

Gene CROCCP3, Length 5,368 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP3-201ENST00000263511 ATPAF2Q8N5M1 289 aa17.75■□□□□ 0.43
CROCCP3-201ENST00000263511 SLC30A5Q8TAD4 765 aa17.75■□□□□ 0.43
CROCCP3-201ENST00000263511 GPBP1L1Q9HC44 474 aaPredicted RBP17.75■□□□□ 0.43
CROCCP3-201ENST00000263511 HNRNPCL2B2RXH8 293 aa17.75■□□□□ 0.43
CROCCP3-201ENST00000263511 HNRNPCL1O60812 293 aaKnown RBP17.75■□□□□ 0.43
CROCCP3-201ENST00000263511 SESN2P58004 480 aaPredicted RBP17.75■□□□□ 0.43
CROCCP3-201ENST00000263511 CELF2O95319 508 aaKnown RBP17.75■□□□□ 0.43
CROCCP3-201ENST00000263511 KCNA2P16389 499 aa17.75■□□□□ 0.43
CROCCP3-201ENST00000263511 STAT4Q14765 748 aa17.75■□□□□ 0.43
CROCCP3-201ENST00000263511 RBBP7Q16576 425 aa17.75■□□□□ 0.43
CROCCP3-201ENST00000263511 MMS22LQ6ZRQ5 1243 aa17.75■□□□□ 0.43
CROCCP3-201ENST00000263511 TSR3Q9UJK0 312 aaKnown RBP17.75■□□□□ 0.43
CROCCP3-201ENST00000263511 PCDHGB4Q9UN71 923 aa17.75■□□□□ 0.43
CROCCP3-201ENST00000263511 ATP1A1P05023 1023 aaKnown RBP17.74■□□□□ 0.43
CROCCP3-201ENST00000263511 PDLIM2Q96JY6 352 aa17.74■□□□□ 0.43
CROCCP3-201ENST00000263511 AGBL1Q96MI9 1066 aa17.74■□□□□ 0.43
CROCCP3-201ENST00000263511 MLXIPLQ9NP71 852 aa17.74■□□□□ 0.43
CROCCP3-201ENST00000263511 DCTN4Q9UJW0 460 aa17.74■□□□□ 0.43
CROCCP3-201ENST00000263511 PXDNLA1KZ92 1463 aa17.74■□□□□ 0.43
CROCCP3-201ENST00000263511 A0A1B0GTH6 734 aa17.74■□□□□ 0.43
CROCCP3-201ENST00000263511 GTF2H3Q13889 308 aa17.74■□□□□ 0.43
CROCCP3-201ENST00000263511 SLC15A2Q16348 729 aa17.74■□□□□ 0.43
CROCCP3-201ENST00000263511 P3H1Q32P28 736 aa17.74■□□□□ 0.43
CROCCP3-201ENST00000263511 GPRASP2Q96D09 838 aa17.74■□□□□ 0.43
CROCCP3-201ENST00000263511 TGS1Q96RS0 853 aaKnown RBP17.74■□□□□ 0.43
CROCCP3-201ENST00000263511 SEPT5Q99719 369 aaPredicted RBP17.74■□□□□ 0.43
CROCCP3-201ENST00000263511 KIFC3Q9BVG8 833 aa17.74■□□□□ 0.43
CROCCP3-201ENST00000263511 KCNH7Q9NS40 1196 aa17.74■□□□□ 0.43
CROCCP3-201ENST00000263511 MAGEA9P43362 315 aa17.74■□□□□ 0.43
CROCCP3-201ENST00000263511 LAMB3Q13751 1172 aa17.74■□□□□ 0.43
CROCCP3-201ENST00000263511 BEND6Q5SZJ8 279 aaPredicted RBP17.74■□□□□ 0.43
CROCCP3-201ENST00000263511 MTBPQ96DY7 904 aa17.74■□□□□ 0.43
CROCCP3-201ENST00000263511 ASMTLO95671 621 aa17.74■□□□□ 0.43
CROCCP3-201ENST00000263511 AARSP49588 968 aaKnown RBP eCLIP17.74■□□□□ 0.43
CROCCP3-201ENST00000263511 GALCP54803 685 aa17.74■□□□□ 0.43
CROCCP3-201ENST00000263511 STK4Q13043 487 aa17.74■□□□□ 0.43
CROCCP3-201ENST00000263511 DDIASQ8IXT1 998 aa17.74■□□□□ 0.43
CROCCP3-201ENST00000263511 TRIML2Q8N7C3 387 aa17.74■□□□□ 0.43
CROCCP3-201ENST00000263511 SLC35G2Q8TBE7 412 aa17.74■□□□□ 0.43
CROCCP3-201ENST00000263511 SCFD1Q8WVM8 642 aa17.74■□□□□ 0.43
CROCCP3-201ENST00000263511 LRRC37BQ96QE4 947 aa17.74■□□□□ 0.43
CROCCP3-201ENST00000263511 EML4Q9HC35 981 aaKnown RBP17.74■□□□□ 0.43
CROCCP3-201ENST00000263511 SENP1Q9P0U3 644 aa17.74■□□□□ 0.43
CROCCP3-201ENST00000263511 AMACRQ9UHK6 382 aa17.74■□□□□ 0.43
CROCCP3-201ENST00000263511 ZDHHC9Q9Y397 364 aa17.74■□□□□ 0.43
CROCCP3-201ENST00000263511 CNTNAP5Q8WYK1 1306 aa17.74■□□□□ 0.43
CROCCP3-201ENST00000263511 PITPNM2Q9BZ72 1349 aa17.74■□□□□ 0.43
CROCCP3-201ENST00000263511 SETBP1Q9Y6X0 1596 aa17.74■□□□□ 0.43
CROCCP3-201ENST00000263511 HLA-DRAP01903 254 aa17.73■□□□□ 0.43
CROCCP3-201ENST00000263511 FBXW4P57775 412 aa17.73■□□□□ 0.43
CROCCP3-201ENST00000263511 SMAD1Q15797 465 aaKnown RBP17.73■□□□□ 0.43
CROCCP3-201ENST00000263511 MKNK1Q9BUB5 465 aa17.73■□□□□ 0.43
CROCCP3-201ENST00000263511 TSSK1BQ9BXA7 367 aa17.73■□□□□ 0.43
CROCCP3-201ENST00000263511 SMYD3Q9H7B4 428 aa17.73■□□□□ 0.43
CROCCP3-201ENST00000263511 TMEM8AQ9HCN3 771 aa17.73■□□□□ 0.43
CROCCP3-201ENST00000263511 HMBSP08397 361 aa17.73■□□□□ 0.43
CROCCP3-201ENST00000263511 ICE2Q659A1 982 aa17.73■□□□□ 0.43
CROCCP3-201ENST00000263511 NOTUMQ6P988 496 aa17.73■□□□□ 0.43
CROCCP3-201ENST00000263511 KDELC2Q7Z4H8 507 aa17.73■□□□□ 0.43
CROCCP3-201ENST00000263511 LRRC71Q8N4P6 559 aa17.73■□□□□ 0.43
CROCCP3-201ENST00000263511 SPATA4Q8NEY3 305 aa17.73■□□□□ 0.43
CROCCP3-201ENST00000263511 SLC7A5P2Q9GIP4 190 aa17.73■□□□□ 0.43
CROCCP3-201ENST00000263511 NDE1Q9NXR1 346 aa17.73■□□□□ 0.43
CROCCP3-201ENST00000263511 PCDHB2Q9Y5E7 798 aa17.73■□□□□ 0.43
CROCCP3-201ENST00000263511 EXTL3O43909 919 aa17.73■□□□□ 0.43
CROCCP3-201ENST00000263511 ANTXR2P58335 489 aa17.73■□□□□ 0.43
CROCCP3-201ENST00000263511 FBXL5Q9UKA1 691 aa17.73■□□□□ 0.43
CROCCP3-201ENST00000263511 CFAP69A5D8W1 941 aa17.73■□□□□ 0.43
CROCCP3-201ENST00000263511 HIST1H2AGP0C0S8 130 aaPredicted RBP17.73■□□□□ 0.43
CROCCP3-201ENST00000263511 HIST1H2ADP20671 130 aa17.73■□□□□ 0.43
CROCCP3-201ENST00000263511 PPP4CP60510 307 aa17.73■□□□□ 0.43
CROCCP3-201ENST00000263511 TBC1D19Q8N5T2 526 aa17.73■□□□□ 0.43
CROCCP3-201ENST00000263511 HIST1H2AHQ96KK5 128 aa17.73■□□□□ 0.43
CROCCP3-201ENST00000263511 MCEEQ96PE7 176 aa17.73■□□□□ 0.43
CROCCP3-201ENST00000263511 HIST1H2AJQ99878 128 aa17.73■□□□□ 0.43
CROCCP3-201ENST00000263511 H2AFJQ9BTM1 129 aa17.73■□□□□ 0.43
CROCCP3-201ENST00000263511 KLHL11Q9NVR0 708 aa17.73■□□□□ 0.43
CROCCP3-201ENST00000263511 TEKT2Q9UIF3 430 aa17.73■□□□□ 0.43
CROCCP3-201ENST00000263511 GMNCA6NCL1 334 aa17.72■□□□□ 0.43
CROCCP3-201ENST00000263511 EEF2KO00418 725 aaKnown RBP17.72■□□□□ 0.43
CROCCP3-201ENST00000263511 FXR2P51116 673 aaKnown RBP eCLIP17.72■□□□□ 0.43
CROCCP3-201ENST00000263511 MAPRE2Q15555 327 aa17.72■□□□□ 0.43
CROCCP3-201ENST00000263511 UGP2Q16851 508 aa17.72■□□□□ 0.43
CROCCP3-201ENST00000263511 C1orf146Q5VVC0 180 aa17.72■□□□□ 0.43
CROCCP3-201ENST00000263511 MFN1Q8IWA4 741 aa17.72■□□□□ 0.43
CROCCP3-201ENST00000263511 GLT1D1Q96MS3 346 aa17.72■□□□□ 0.43
CROCCP3-201ENST00000263511 ITM2BQ9Y287 266 aa17.72■□□□□ 0.43
CROCCP3-201ENST00000263511 GFAPP14136 432 aa17.72■□□□□ 0.43
CROCCP3-201ENST00000263511 TRAPPC11Q7Z392 1133 aa17.72■□□□□ 0.43
CROCCP3-201ENST00000263511 RNF180Q86T96 592 aa17.72■□□□□ 0.43
CROCCP3-201ENST00000263511 KRT35Q92764 455 aa17.72■□□□□ 0.43
CROCCP3-201ENST00000263511 KDM4CQ9H3R0 1056 aa17.72■□□□□ 0.43
CROCCP3-201ENST00000263511 COG4Q9H9E3 785 aa17.72■□□□□ 0.43
CROCCP3-201ENST00000263511 P4HA2O15460 535 aa17.72■□□□□ 0.43
CROCCP3-201ENST00000263511 RPS6P62753 249 aaKnown RBP17.72■□□□□ 0.43
CROCCP3-201ENST00000263511 ZC2HC1CQ53FD0 456 aaPredicted RBP17.72■□□□□ 0.43
CROCCP3-201ENST00000263511 PABPC5Q96DU9 382 aaKnown RBP17.72■□□□□ 0.43
CROCCP3-201ENST00000263511 AGAP3Q96P47 875 aa17.72■□□□□ 0.43
CROCCP3-201ENST00000263511 ITIH6Q6UXX5 1313 aa17.72■□□□□ 0.43
CROCCP3-201ENST00000263511 GAS2O43903 313 aaKnown RBP17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms