RNA–Protein interactions for RNA: ENST00000262395.9

TRAF4-201, Transcript of TNF receptor associated factor 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF4, Length 2,923 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-201ENST00000262395 SPP2Q13103 211 aa19.11■□□□□ 0.65
TRAF4-201ENST00000262395 FASTKD3Q14CZ7 662 aaKnown RBP19.11■□□□□ 0.65
TRAF4-201ENST00000262395 VPS72Q15906 364 aa19.11■□□□□ 0.65
TRAF4-201ENST00000262395 UGCGQ16739 394 aa19.11■□□□□ 0.65
TRAF4-201ENST00000262395 NT5C1BQ96P26 610 aa19.11■□□□□ 0.65
TRAF4-201ENST00000262395 KCND2Q9NZV8 630 aa19.11■□□□□ 0.65
TRAF4-201ENST00000262395 TCP10L2B9ZVM9 353 aa19.11■□□□□ 0.65
TRAF4-201ENST00000262395 SLC8A3P57103 927 aa19.11■□□□□ 0.65
TRAF4-201ENST00000262395 STRN3Q13033 797 aa19.11■□□□□ 0.65
TRAF4-201ENST00000262395 P3H1Q32P28 736 aa19.11■□□□□ 0.65
TRAF4-201ENST00000262395 ATP13A4Q4VNC1 1196 aa19.11■□□□□ 0.65
TRAF4-201ENST00000262395 KRT39Q6A163 491 aa19.11■□□□□ 0.65
TRAF4-201ENST00000262395 MAB21L3Q8N8X9 362 aa19.11■□□□□ 0.65
TRAF4-201ENST00000262395 ATL2Q8NHH9 583 aa19.11■□□□□ 0.65
TRAF4-201ENST00000262395 AGBL1Q96MI9 1066 aa19.11■□□□□ 0.65
TRAF4-201ENST00000262395 RBM15Q96T37 977 aaKnown RBP eCLIP19.11■□□□□ 0.651e-6■■■■□ 25.2
TRAF4-201ENST00000262395 SAYSD1Q9NPB0 183 aa19.11■□□□□ 0.65
TRAF4-201ENST00000262395 AHDC1Q5TGY3 1603 aaPredicted RBP19.1■□□□□ 0.65
TRAF4-201ENST00000262395 CDH16O75309 829 aa19.1■□□□□ 0.65
TRAF4-201ENST00000262395 CCNHP51946 323 aaPredicted RBP19.1■□□□□ 0.65
TRAF4-201ENST00000262395 TAS2R40P59535 323 aa19.1■□□□□ 0.65
TRAF4-201ENST00000262395 CLEC16AQ2KHT3 1053 aa19.1■□□□□ 0.65
TRAF4-201ENST00000262395 HOMER2Q9NSB8 354 aa19.1■□□□□ 0.65
TRAF4-201ENST00000262395 P4HA2O15460 535 aa19.1■□□□□ 0.65
TRAF4-201ENST00000262395 UNC5CO95185 931 aa19.1■□□□□ 0.65
TRAF4-201ENST00000262395 KRT10P13645 584 aa19.1■□□□□ 0.65
TRAF4-201ENST00000262395 TAB3Q8N5C8 712 aaPredicted RBP19.1■□□□□ 0.65
TRAF4-201ENST00000262395 PARD3BQ8TEW8 1205 aa19.1■□□□□ 0.65
TRAF4-201ENST00000262395 DDX27Q96GQ7 796 aaKnown RBP19.1■□□□□ 0.65
TRAF4-201ENST00000262395 XPO5Q9HAV4 1204 aaKnown RBP eCLIP19.1■□□□□ 0.65
TRAF4-201ENST00000262395 RAB20Q9NX57 234 aa19.1■□□□□ 0.65
TRAF4-201ENST00000262395 COL20A1Q9P218 1284 aa19.1■□□□□ 0.65
TRAF4-201ENST00000262395 GRID1Q9ULK0 1009 aa19.1■□□□□ 0.65
TRAF4-201ENST00000262395 EXOC1LA0A1B0GW35 172 aa19.09■□□□□ 0.65
TRAF4-201ENST00000262395 MAGEA4P43358 317 aa19.09■□□□□ 0.65
TRAF4-201ENST00000262395 TAF11Q15544 211 aa19.09■□□□□ 0.65
TRAF4-201ENST00000262395 PKN2Q16513 984 aaKnown RBP19.09■□□□□ 0.65
TRAF4-201ENST00000262395 FBF1Q8TES7 1133 aa19.09■□□□□ 0.65
TRAF4-201ENST00000262395 HAUS1Q96CS2 278 aa19.09■□□□□ 0.65
TRAF4-201ENST00000262395 MXRA8Q9BRK3 442 aa19.09■□□□□ 0.65
TRAF4-201ENST00000262395 C11orf70Q9BRQ4 267 aa19.09■□□□□ 0.65
TRAF4-201ENST00000262395 IDI2Q9BXS1 227 aa19.09■□□□□ 0.65
TRAF4-201ENST00000262395 PHTF1Q9UMS5 762 aa19.09■□□□□ 0.65
TRAF4-201ENST00000262395 CHKBQ9Y259 395 aa19.09■□□□□ 0.65
TRAF4-201ENST00000262395 BANF1O75531 89 aa19.09■□□□□ 0.65
TRAF4-201ENST00000262395 CBX6O95503 412 aa19.09■□□□□ 0.65
TRAF4-201ENST00000262395 KRT15P19012 456 aa19.09■□□□□ 0.65
TRAF4-201ENST00000262395 GCKP35557 465 aa19.09■□□□□ 0.65
TRAF4-201ENST00000262395 IL9RQ01113 521 aa19.09■□□□□ 0.65
TRAF4-201ENST00000262395 LDHDQ86WU2 507 aa19.09■□□□□ 0.65
TRAF4-201ENST00000262395 MCOLN2Q8IZK6 566 aa19.09■□□□□ 0.65
TRAF4-201ENST00000262395 FBXL13Q8NEE6 735 aa19.09■□□□□ 0.65
TRAF4-201ENST00000262395 SLCO2A1Q92959 643 aa19.09■□□□□ 0.65
TRAF4-201ENST00000262395 FHDC1Q9C0D6 1143 aaPredicted RBP19.09■□□□□ 0.65
TRAF4-201ENST00000262395 ZNFX1Q9P2E3 1918 aaKnown RBP19.08■□□□□ 0.65
TRAF4-201ENST00000262395 CLRN2A0PK11 232 aa19.08■□□□□ 0.65
TRAF4-201ENST00000262395 FAM47DPA6NHR8 397 aa19.08■□□□□ 0.65
TRAF4-201ENST00000262395 P4HBP07237 508 aaKnown RBP19.08■□□□□ 0.65
TRAF4-201ENST00000262395 B3GNT9Q6UX72 402 aa19.08■□□□□ 0.65
TRAF4-201ENST00000262395 SV2AQ7L0J3 742 aa19.08■□□□□ 0.65
TRAF4-201ENST00000262395 KCTD17Q8N5Z5 321 aa19.08■□□□□ 0.65
TRAF4-201ENST00000262395 KIFAP3Q92845 792 aa19.08■□□□□ 0.65
TRAF4-201ENST00000262395 ACSF2Q96CM8 615 aaPredicted RBP19.08■□□□□ 0.65
TRAF4-201ENST00000262395 PRMT6Q96LA8 375 aaPredicted RBP19.08■□□□□ 0.65
TRAF4-201ENST00000262395 GLIS2Q9BZE0 524 aaPredicted RBP19.08■□□□□ 0.65
TRAF4-201ENST00000262395 KIAA1683Q9H0B3 1180 aa19.08■□□□□ 0.65
TRAF4-201ENST00000262395 C12orf65Q9H3J6 166 aaKnown RBP19.08■□□□□ 0.65
TRAF4-201ENST00000262395 ADGRA3Q8IWK6 1321 aa19.08■□□□□ 0.65
TRAF4-201ENST00000262395 WDR91A4D1P6 747 aa19.08■□□□□ 0.64
TRAF4-201ENST00000262395 GOLGA8SH3BPF8 625 aa19.08■□□□□ 0.64
TRAF4-201ENST00000262395 GOLGA8MH3BSY2 632 aa19.08■□□□□ 0.64
TRAF4-201ENST00000262395 CNGA1P29973 690 aa19.08■□□□□ 0.64
TRAF4-201ENST00000262395 YWHABP31946 246 aaKnown RBP19.08■□□□□ 0.64
TRAF4-201ENST00000262395 SPOPLQ6IQ16 392 aa19.08■□□□□ 0.64
TRAF4-201ENST00000262395 MIS18BP1Q6P0N0 1132 aa19.08■□□□□ 0.64
TRAF4-201ENST00000262395 GRK7Q8WTQ7 553 aa19.08■□□□□ 0.64
TRAF4-201ENST00000262395 CCDC77Q9BR77 488 aa19.08■□□□□ 0.64
TRAF4-201ENST00000262395 TCF4P15884 667 aa19.07■□□□□ 0.64
TRAF4-201ENST00000262395 GM2AP17900 193 aa19.07■□□□□ 0.64
TRAF4-201ENST00000262395 RPA3P35244 121 aaPredicted RBP19.07■□□□□ 0.64
TRAF4-201ENST00000262395 ABL2P42684 1182 aa19.07■□□□□ 0.64
TRAF4-201ENST00000262395 MYBPC2Q14324 1141 aa19.07■□□□□ 0.64
TRAF4-201ENST00000262395 XKR9Q5GH70 373 aa19.07■□□□□ 0.64
TRAF4-201ENST00000262395 RNF43Q68DV7 783 aa19.07■□□□□ 0.64
TRAF4-201ENST00000262395 SORBS3O60504 671 aa19.07■□□□□ 0.64
TRAF4-201ENST00000262395 FDX1P10109 184 aa19.07■□□□□ 0.64
TRAF4-201ENST00000262395 MYBL1P10243 752 aa19.07■□□□□ 0.64
TRAF4-201ENST00000262395 CCNB1P14635 433 aa19.07■□□□□ 0.64
TRAF4-201ENST00000262395 EPHB2P29323 1055 aa19.07■□□□□ 0.64
TRAF4-201ENST00000262395 GTF2BQ00403 316 aa19.07■□□□□ 0.64
TRAF4-201ENST00000262395 BIRC2Q13490 618 aa19.07■□□□□ 0.64
TRAF4-201ENST00000262395 SETDB1Q15047 1291 aa19.07■□□□□ 0.64
TRAF4-201ENST00000262395 CPXCR1Q8N123 301 aa19.07■□□□□ 0.64
TRAF4-201ENST00000262395 ANKRD35Q8N283 1001 aa19.07■□□□□ 0.64
TRAF4-201ENST00000262395 VPS37BQ9H9H4 285 aa19.07■□□□□ 0.64
TRAF4-201ENST00000262395 A0A1W2PPM1 405 aa19.07■□□□□ 0.64
TRAF4-201ENST00000262395 NFIBO00712 420 aa19.07■□□□□ 0.64
TRAF4-201ENST00000262395 PSMC4P43686 418 aa19.07■□□□□ 0.64
TRAF4-201ENST00000262395 FAM182AQ5T1J6 154 aa19.07■□□□□ 0.64
TRAF4-201ENST00000262395 PCNX4Q63HM2 1172 aa19.07■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms