RNA–Protein interactions for RNA: ENST00000262213.6

TRAM1-201, Transcript of translocation associated membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAM1, Length 2,785 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1-201ENST00000262213 POLRMTO00411 1230 aaKnown RBP18.56■□□□□ 0.56
TRAM1-201ENST00000262213 RARRES1P49788 294 aa18.56■□□□□ 0.56
TRAM1-201ENST00000262213 MYBPC2Q14324 1141 aa18.56■□□□□ 0.56
TRAM1-201ENST00000262213 CLEC16AQ2KHT3 1053 aa18.56■□□□□ 0.56
TRAM1-201ENST00000262213 P3H1Q32P28 736 aa18.56■□□□□ 0.56
TRAM1-201ENST00000262213 PLA2G4FQ68DD2 849 aa18.56■□□□□ 0.56
TRAM1-201ENST00000262213 FAM47DPA6NHR8 397 aa18.56■□□□□ 0.56
TRAM1-201ENST00000262213 PI4K2BG5E9Z4 385 aa18.56■□□□□ 0.56
TRAM1-201ENST00000262213 CCNHP51946 323 aaPredicted RBP18.56■□□□□ 0.56
TRAM1-201ENST00000262213 SETDB1Q15047 1291 aa18.56■□□□□ 0.56
TRAM1-201ENST00000262213 RNF43Q68DV7 783 aa18.56■□□□□ 0.56
TRAM1-201ENST00000262213 PPP1R21Q6ZMI0 780 aa18.56■□□□□ 0.56
TRAM1-201ENST00000262213 IL31RAQ8NI17 732 aa18.56■□□□□ 0.56
TRAM1-201ENST00000262213 DDX1Q92499 740 aaKnown RBP18.56■□□□□ 0.56
TRAM1-201ENST00000262213 SLCO2A1Q92959 643 aa18.56■□□□□ 0.56
TRAM1-201ENST00000262213 PHTF1Q9UMS5 762 aa18.56■□□□□ 0.56
TRAM1-201ENST00000262213 ONECUT3O60422 494 aaPredicted RBP18.55■□□□□ 0.56
TRAM1-201ENST00000262213 MYCNP04198 464 aaPredicted RBP18.55■□□□□ 0.56
TRAM1-201ENST00000262213 ZSCAN5DPP0CG00 497 aa18.55■□□□□ 0.56
TRAM1-201ENST00000262213 KRT15P19012 456 aa18.55■□□□□ 0.56
TRAM1-201ENST00000262213 ADSSP30520 456 aa18.55■□□□□ 0.56
TRAM1-201ENST00000262213 MAGEA4P43358 317 aa18.55■□□□□ 0.56
TRAM1-201ENST00000262213 SOX10P56693 466 aa18.55■□□□□ 0.56
TRAM1-201ENST00000262213 MKRN3Q13064 507 aaKnown RBP18.55■□□□□ 0.56
TRAM1-201ENST00000262213 ANKRD35Q8N283 1001 aa18.55■□□□□ 0.56
TRAM1-201ENST00000262213 EHMT1Q9H9B1 1298 aa18.55■□□□□ 0.56
TRAM1-201ENST00000262213 KCNH7Q9NS40 1196 aa18.55■□□□□ 0.56
TRAM1-201ENST00000262213 ADGRA3Q8IWK6 1321 aa18.55■□□□□ 0.56
TRAM1-201ENST00000262213 CCDC189A1A4V9 331 aa18.55■□□□□ 0.56
TRAM1-201ENST00000262213 GRIN3BO60391 1043 aa18.55■□□□□ 0.56
TRAM1-201ENST00000262213 SORBS3O60504 671 aa18.55■□□□□ 0.56
TRAM1-201ENST00000262213 GLIS1Q8NBF1 620 aa18.55■□□□□ 0.56
TRAM1-201ENST00000262213 RAB20Q9NX57 234 aa18.55■□□□□ 0.56
TRAM1-201ENST00000262213 TRPC5Q9UL62 973 aaPredicted RBP18.55■□□□□ 0.56
TRAM1-201ENST00000262213 SBDSQ9Y3A5 250 aaKnown RBP eCLIP18.55■□□□□ 0.56
TRAM1-201ENST00000262213 PIAS1O75925 651 aa18.54■□□□□ 0.56
TRAM1-201ENST00000262213 FASTKD3Q14CZ7 662 aaKnown RBP18.54■□□□□ 0.56
TRAM1-201ENST00000262213 ANKS1BQ7Z6G8 1248 aa18.54■□□□□ 0.56
TRAM1-201ENST00000262213 MCOLN2Q8IZK6 566 aa18.54■□□□□ 0.56
TRAM1-201ENST00000262213 FBXL13Q8NEE6 735 aa18.54■□□□□ 0.56
TRAM1-201ENST00000262213 DDX27Q96GQ7 796 aaKnown RBP18.54■□□□□ 0.56
TRAM1-201ENST00000262213 RAB3IPQ96QF0 476 aaPredicted RBP18.54■□□□□ 0.56
TRAM1-201ENST00000262213 LBHD1Q9BQE6 289 aaPredicted RBP18.54■□□□□ 0.56
TRAM1-201ENST00000262213 MXRA8Q9BRK3 442 aa18.54■□□□□ 0.56
TRAM1-201ENST00000262213 C11orf70Q9BRQ4 267 aa18.54■□□□□ 0.56
TRAM1-201ENST00000262213 XPO5Q9HAV4 1204 aaKnown RBP eCLIP18.54■□□□□ 0.56
TRAM1-201ENST00000262213 TXLNGQ9NUQ3 528 aa18.54■□□□□ 0.56
TRAM1-201ENST00000262213 ZMYND8Q9ULU4 1186 aaPredicted RBP18.54■□□□□ 0.56
TRAM1-201ENST00000262213 CHKBQ9Y259 395 aa18.54■□□□□ 0.56
TRAM1-201ENST00000262213 CBX6O95503 412 aa18.54■□□□□ 0.56
TRAM1-201ENST00000262213 P4HBP07237 508 aaKnown RBP18.54■□□□□ 0.56
TRAM1-201ENST00000262213 CCNB1P14635 433 aa18.54■□□□□ 0.56
TRAM1-201ENST00000262213 ETS1P14921 441 aa18.54■□□□□ 0.56
TRAM1-201ENST00000262213 TAS2R40P59535 323 aa18.54■□□□□ 0.56
TRAM1-201ENST00000262213 PKN2Q16513 984 aaKnown RBP18.54■□□□□ 0.56
TRAM1-201ENST00000262213 UGCGQ16739 394 aa18.54■□□□□ 0.56
TRAM1-201ENST00000262213 CAPRIN2Q6IMN6 1127 aaKnown RBP18.54■□□□□ 0.56
TRAM1-201ENST00000262213 PARD3BQ8TEW8 1205 aa18.54■□□□□ 0.56
TRAM1-201ENST00000262213 IDI2Q9BXS1 227 aa18.54■□□□□ 0.56
TRAM1-201ENST00000262213 KIAA1683Q9H0B3 1180 aa18.54■□□□□ 0.56
TRAM1-201ENST00000262213 VPS37BQ9H9H4 285 aa18.54■□□□□ 0.56
TRAM1-201ENST00000262213 BATF3Q9NR55 127 aa18.54■□□□□ 0.56
TRAM1-201ENST00000262213 LGALS13Q9UHV8 139 aa18.54■□□□□ 0.56
TRAM1-201ENST00000262213 TCP10L2B9ZVM9 353 aa18.53■□□□□ 0.56
TRAM1-201ENST00000262213 CHRM1P11229 460 aaPredicted RBP18.53■□□□□ 0.56
TRAM1-201ENST00000262213 KRT10P13645 584 aa18.53■□□□□ 0.56
TRAM1-201ENST00000262213 HAUS1Q96CS2 278 aa18.53■□□□□ 0.56
TRAM1-201ENST00000262213 LRRC37BQ96QE4 947 aa18.53■□□□□ 0.56
TRAM1-201ENST00000262213 TMX4Q9H1E5 349 aaPredicted RBP18.53■□□□□ 0.56
TRAM1-201ENST00000262213 TRABDQ9H4I3 376 aa18.53■□□□□ 0.56
TRAM1-201ENST00000262213 MRPL11Q9Y3B7 192 aaKnown RBP18.53■□□□□ 0.56
TRAM1-201ENST00000262213 RBBP6Q7Z6E9 1792 aaKnown RBP18.53■□□□□ 0.56
TRAM1-201ENST00000262213 WDR91A4D1P6 747 aa18.53■□□□□ 0.56
TRAM1-201ENST00000262213 CFHP08603 1231 aa18.53■□□□□ 0.56
TRAM1-201ENST00000262213 YWHABP31946 246 aaKnown RBP18.53■□□□□ 0.56
TRAM1-201ENST00000262213 MAN1A1P33908 653 aa18.53■□□□□ 0.56
TRAM1-201ENST00000262213 POLGP54098 1239 aaPredicted RBP18.53■□□□□ 0.56
TRAM1-201ENST00000262213 CAV1Q03135 178 aa18.53■□□□□ 0.56
TRAM1-201ENST00000262213 SPP2Q13103 211 aa18.53■□□□□ 0.56
TRAM1-201ENST00000262213 STAT4Q14765 748 aa18.53■□□□□ 0.56
TRAM1-201ENST00000262213 ATP13A4Q4VNC1 1196 aa18.53■□□□□ 0.56
TRAM1-201ENST00000262213 MIS18BP1Q6P0N0 1132 aa18.53■□□□□ 0.56
TRAM1-201ENST00000262213 SV2AQ7L0J3 742 aa18.53■□□□□ 0.56
TRAM1-201ENST00000262213 LDHDQ86WU2 507 aa18.53■□□□□ 0.56
TRAM1-201ENST00000262213 MAIP1Q8WWC4 291 aa18.53■□□□□ 0.56
TRAM1-201ENST00000262213 POMGNT1Q8WZA1 660 aa18.53■□□□□ 0.56
TRAM1-201ENST00000262213 AGBL1Q96MI9 1066 aa18.53■□□□□ 0.56
TRAM1-201ENST00000262213 FHDC1Q9C0D6 1143 aaPredicted RBP18.53■□□□□ 0.56
TRAM1-201ENST00000262213 GRID1Q9ULK0 1009 aa18.53■□□□□ 0.56
TRAM1-201ENST00000262213 EPHB2P29323 1055 aa18.53■□□□□ 0.56
TRAM1-201ENST00000262213 ABL2P42684 1182 aa18.53■□□□□ 0.56
TRAM1-201ENST00000262213 RAD23BP54727 409 aa18.53■□□□□ 0.56
TRAM1-201ENST00000262213 GTF2BQ00403 316 aa18.53■□□□□ 0.56
TRAM1-201ENST00000262213 XKR9Q5GH70 373 aa18.53■□□□□ 0.56
TRAM1-201ENST00000262213 SYDE1Q6ZW31 735 aaPredicted RBP18.53■□□□□ 0.56
TRAM1-201ENST00000262213 LONP2Q86WA8 852 aa18.53■□□□□ 0.56
TRAM1-201ENST00000262213 CCDC89Q8N998 374 aa18.53■□□□□ 0.56
TRAM1-201ENST00000262213 ZNF622Q969S3 477 aaKnown RBP eCLIP18.53■□□□□ 0.56
TRAM1-201ENST00000262213 OSBPL8Q9BZF1 889 aa18.53■□□□□ 0.56
TRAM1-201ENST00000262213 TMEM8AQ9HCN3 771 aa18.53■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms