RNA–Protein interactions for RNA: ENST00000250559.13

RAP1B-201, Transcript of RAP1B, member of RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAP1B, Length 13,438 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAP1B-201ENST00000250559 PPWD1Q96BP3 646 aaKnown RBP4.98□□□□□ -1.61
RAP1B-201ENST00000250559 SNRNP35Q16560 246 aaKnown RBP4.98□□□□□ -1.61
RAP1B-201ENST00000250559 C6orf118Q5T5N4 469 aa4.98□□□□□ -1.61
RAP1B-201ENST00000250559 COG1Q8WTW3 980 aa4.98□□□□□ -1.61
RAP1B-201ENST00000250559 FAM151AQ8WW52 585 aa4.98□□□□□ -1.61
RAP1B-201ENST00000250559 SLC13A1Q9BZW2 595 aa4.98□□□□□ -1.61
RAP1B-201ENST00000250559 DDX4Q9NQI0 724 aaKnown RBP4.98□□□□□ -1.61
RAP1B-201ENST00000250559 FBXO40Q9UH90 709 aa4.98□□□□□ -1.61
RAP1B-201ENST00000250559 PEX19P40855 299 aa4.98□□□□□ -1.61
RAP1B-201ENST00000250559 STAT5BP51692 787 aa4.98□□□□□ -1.61
RAP1B-201ENST00000250559 CASP7P55210 303 aa4.98□□□□□ -1.61
RAP1B-201ENST00000250559 KIF19Q2TAC6 998 aa4.98□□□□□ -1.61
RAP1B-201ENST00000250559 ARMCX6Q7L4S7 300 aa4.98□□□□□ -1.61
RAP1B-201ENST00000250559 RD3Q7Z3Z2 195 aa4.98□□□□□ -1.61
RAP1B-201ENST00000250559 PLEKHH3Q7Z736 793 aa4.98□□□□□ -1.61
RAP1B-201ENST00000250559 DDX42Q86XP3 938 aaKnown RBP eCLIP4.98□□□□□ -1.61
RAP1B-201ENST00000250559 ZNF507Q8TCN5 953 aa4.98□□□□□ -1.61
RAP1B-201ENST00000250559 KLHL29Q96CT2 875 aa4.98□□□□□ -1.61
RAP1B-201ENST00000250559 TOPORSQ9NS56 1045 aaPredicted RBP4.98□□□□□ -1.61
RAP1B-201ENST00000250559 SNX9Q9Y5X1 595 aa4.98□□□□□ -1.61
RAP1B-201ENST00000250559 TISP43B9A030 160 aa4.98□□□□□ -1.61
RAP1B-201ENST00000250559 DLL1O00548 723 aa4.98□□□□□ -1.61
RAP1B-201ENST00000250559 WDR46O15213 610 aaKnown RBP4.98□□□□□ -1.61
RAP1B-201ENST00000250559 GRIK1P39086 918 aa4.98□□□□□ -1.61
RAP1B-201ENST00000250559 EPM2AIP1Q7L775 607 aaPredicted RBP4.98□□□□□ -1.61
RAP1B-201ENST00000250559 ATP6V1E2Q96A05 226 aa4.98□□□□□ -1.61
RAP1B-201ENST00000250559 SLC4A7Q9Y6M7 1214 aa4.98□□□□□ -1.61
RAP1B-201ENST00000250559 BCL9O00512 1426 aa4.98□□□□□ -1.61
RAP1B-201ENST00000250559 SYNGAP1Q96PV0 1343 aa4.98□□□□□ -1.61
RAP1B-201ENST00000250559 ZC3H4Q9UPT8 1303 aaKnown RBP4.98□□□□□ -1.61
RAP1B-201ENST00000250559 EIF3CLB5ME19 914 aaKnown RBP4.98□□□□□ -1.61
RAP1B-201ENST00000250559 BRAFP15056 766 aa4.98□□□□□ -1.61
RAP1B-201ENST00000250559 NLRP11P59045 1033 aaKnown RBP4.98□□□□□ -1.61
RAP1B-201ENST00000250559 XKR3Q5GH77 459 aa4.98□□□□□ -1.61
RAP1B-201ENST00000250559 PDIK1LQ8N165 341 aa4.98□□□□□ -1.61
RAP1B-201ENST00000250559 GPRC5AQ8NFJ5 357 aa4.98□□□□□ -1.61
RAP1B-201ENST00000250559 RBM41Q96IZ5 413 aaKnown RBP4.98□□□□□ -1.61
RAP1B-201ENST00000250559 SLC4A9Q96Q91 983 aa4.98□□□□□ -1.61
RAP1B-201ENST00000250559 EIF3CQ99613 913 aaKnown RBP4.98□□□□□ -1.61
RAP1B-201ENST00000250559 GNL1P36915 607 aaPredicted RBP4.97□□□□□ -1.61
RAP1B-201ENST00000250559 PDIA5Q14554 519 aa4.97□□□□□ -1.61
RAP1B-201ENST00000250559 EMC2Q15006 297 aa4.97□□□□□ -1.61
RAP1B-201ENST00000250559 C4orf33Q8N1A6 199 aa4.97□□□□□ -1.61
RAP1B-201ENST00000250559 THEM5Q8N1Q8 247 aa4.97□□□□□ -1.61
RAP1B-201ENST00000250559 APPL2Q8NEU8 664 aa4.97□□□□□ -1.61
RAP1B-201ENST00000250559 USP33Q8TEY7 942 aa4.97□□□□□ -1.61
RAP1B-201ENST00000250559 IFT43Q96FT9 208 aa4.97□□□□□ -1.61
RAP1B-201ENST00000250559 THAP2Q9H0W7 228 aa4.97□□□□□ -1.61
RAP1B-201ENST00000250559 SARS2Q9NP81 518 aaKnown RBP4.97□□□□□ -1.61
RAP1B-201ENST00000250559 ASTN2O75129 1339 aaPredicted RBP4.97□□□□□ -1.61
RAP1B-201ENST00000250559 ZNF541Q9H0D2 1346 aa4.97□□□□□ -1.61
RAP1B-201ENST00000250559 PHF20L1A8MW92 1017 aa4.97□□□□□ -1.61
RAP1B-201ENST00000250559 ZWINTO95229 277 aa4.97□□□□□ -1.61
RAP1B-201ENST00000250559 SHROOM1Q2M3G4 852 aaPredicted RBP4.97□□□□□ -1.61
RAP1B-201ENST00000250559 BEST2Q8NFU1 509 aa4.97□□□□□ -1.61
RAP1B-201ENST00000250559 RFFLQ8WZ73 363 aa4.97□□□□□ -1.61
RAP1B-201ENST00000250559 L3MBTL3Q96JM7 780 aaPredicted RBP4.97□□□□□ -1.61
RAP1B-201ENST00000250559 SEMA6BQ9H3T3 888 aa4.97□□□□□ -1.61
RAP1B-201ENST00000250559 AFF4Q9UHB7 1163 aaKnown RBP4.97□□□□□ -1.61
RAP1B-201ENST00000250559 FAM86B1E9PN63 330 aa4.97□□□□□ -1.61
RAP1B-201ENST00000250559 COPEO14579 308 aa4.97□□□□□ -1.61
RAP1B-201ENST00000250559 FAM86B2P0C5J1 330 aa4.97□□□□□ -1.61
RAP1B-201ENST00000250559 COL9A2Q14055 689 aaPredicted RBP4.97□□□□□ -1.61
RAP1B-201ENST00000250559 IZUMO3Q5VZ72 239 aa4.97□□□□□ -1.61
RAP1B-201ENST00000250559 MMS22LQ6ZRQ5 1243 aa4.97□□□□□ -1.61
RAP1B-201ENST00000250559 SLC47A2Q86VL8 602 aa4.97□□□□□ -1.61
RAP1B-201ENST00000250559 SPATS2Q86XZ4 545 aaKnown RBP4.97□□□□□ -1.61
RAP1B-201ENST00000250559 VGLL2Q8N8G2 317 aa4.97□□□□□ -1.61
RAP1B-201ENST00000250559 RAPGEF5Q92565 580 aa4.97□□□□□ -1.61
RAP1B-201ENST00000250559 DCBLD2Q96PD2 775 aa4.97□□□□□ -1.61
RAP1B-201ENST00000250559 FSD1LQ9BXM9 530 aa4.97□□□□□ -1.61
RAP1B-201ENST00000250559 ZCWPW1Q9H0M4 648 aa4.97□□□□□ -1.61
RAP1B-201ENST00000250559 SNX12Q9UMY4 172 aa4.97□□□□□ -1.61
RAP1B-201ENST00000250559 GPR75-ASB3A0A0A6YYF3 556 aa4.97□□□□□ -1.61
RAP1B-201ENST00000250559 IQANK1A0A1B0GTG1 560 aa4.97□□□□□ -1.61
RAP1B-201ENST00000250559 NOL3O60936 208 aaKnown RBP4.97□□□□□ -1.61
RAP1B-201ENST00000250559 GNAT1P11488 350 aa4.97□□□□□ -1.61
RAP1B-201ENST00000250559 SKIP12755 728 aa4.97□□□□□ -1.61
RAP1B-201ENST00000250559 MYL4P12829 197 aa4.97□□□□□ -1.61
RAP1B-201ENST00000250559 KLRC2P26717 231 aa4.97□□□□□ -1.61
RAP1B-201ENST00000250559 CHRNA3P32297 505 aa4.97□□□□□ -1.61
RAP1B-201ENST00000250559 TNFAIP2Q03169 654 aa4.97□□□□□ -1.61
RAP1B-201ENST00000250559 KCNB1Q14721 858 aa4.97□□□□□ -1.61
RAP1B-201ENST00000250559 PLPP4Q5VZY2 271 aa4.97□□□□□ -1.61
RAP1B-201ENST00000250559 PPP2R2DQ66LE6 453 aa4.97□□□□□ -1.61
RAP1B-201ENST00000250559 PALB2Q86YC2 1186 aa4.97□□□□□ -1.61
RAP1B-201ENST00000250559 ARHGEF19Q8IW93 802 aa4.97□□□□□ -1.61
RAP1B-201ENST00000250559 ARHGAP24Q8N264 748 aa4.97□□□□□ -1.61
RAP1B-201ENST00000250559 SEL1LQ9UBV2 794 aa4.97□□□□□ -1.61
RAP1B-201ENST00000250559 FOXN3O00409 490 aaPredicted RBP4.97□□□□□ -1.61
RAP1B-201ENST00000250559 FLT3LGP49771 235 aa4.97□□□□□ -1.61
RAP1B-201ENST00000250559 PPP2R5EQ16537 467 aa4.97□□□□□ -1.61
RAP1B-201ENST00000250559 IL17AQ16552 155 aa4.97□□□□□ -1.61
RAP1B-201ENST00000250559 TRIM67Q6ZTA4 783 aa4.97□□□□□ -1.61
RAP1B-201ENST00000250559 SUGP1Q8IWZ8 645 aaKnown RBP4.97□□□□□ -1.61
RAP1B-201ENST00000250559 RHOT1Q8IXI2 618 aa4.97□□□□□ -1.61
RAP1B-201ENST00000250559 HPSEQ9Y251 543 aa4.97□□□□□ -1.61
RAP1B-201ENST00000250559 CCDC188H7C350 402 aa4.97□□□□□ -1.61
RAP1B-201ENST00000250559 CALB1P05937 261 aa4.97□□□□□ -1.61
RAP1B-201ENST00000250559 GRK4P32298 578 aa4.97□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms