RNA–Protein interactions for RNA: ENST00000248121.6

SYNGR3-201, Transcript of synaptogyrin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYNGR3, Length 2,051 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-201ENST00000248121 ABCB4P21439 1286 aa25.11■■□□□ 1.61
SYNGR3-201ENST00000248121 GCNT1Q02742 428 aa25.11■■□□□ 1.61
SYNGR3-201ENST00000248121 C2orf54Q08AI8 447 aa25.11■■□□□ 1.61
SYNGR3-201ENST00000248121 MAP3K21Q5TCX8 1036 aa25.11■■□□□ 1.61
SYNGR3-201ENST00000248121 SCARA3Q6AZY7 606 aa25.11■■□□□ 1.61
SYNGR3-201ENST00000248121 CC2D1AQ6P1N0 951 aaPredicted RBP25.11■■□□□ 1.61
SYNGR3-201ENST00000248121 SLFN11Q7Z7L1 901 aa25.11■■□□□ 1.61
SYNGR3-201ENST00000248121 OR5B17Q8NGF7 314 aa25.11■■□□□ 1.61
SYNGR3-201ENST00000248121 RAET1EQ8TD07 263 aa25.11■■□□□ 1.61
SYNGR3-201ENST00000248121 CGRRF1Q99675 332 aa25.11■■□□□ 1.61
SYNGR3-201ENST00000248121 THAP2Q9H0W7 228 aa25.11■■□□□ 1.61
SYNGR3-201ENST00000248121 GINS2Q9Y248 185 aa25.11■■□□□ 1.61
SYNGR3-201ENST00000248121 ACKR2O00590 384 aa25.1■■□□□ 1.61
SYNGR3-201ENST00000248121 HMGCRP04035 888 aa25.1■■□□□ 1.61
SYNGR3-201ENST00000248121 CYP2C9P11712 490 aa25.1■■□□□ 1.61
SYNGR3-201ENST00000248121 PHKA2P46019 1235 aa25.1■■□□□ 1.61
SYNGR3-201ENST00000248121 CEP120Q8N960 986 aa25.1■■□□□ 1.61
SYNGR3-201ENST00000248121 CPB2Q96IY4 423 aa25.1■■□□□ 1.61
SYNGR3-201ENST00000248121 NFKBIZQ9BYH8 718 aa25.1■■□□□ 1.61
SYNGR3-201ENST00000248121 DNA2P51530 1060 aa25.09■■□□□ 1.61
SYNGR3-201ENST00000248121 IFI16Q16666 785 aaKnown RBP25.09■■□□□ 1.61
SYNGR3-201ENST00000248121 TAF3Q5VWG9 929 aa25.09■■□□□ 1.61
SYNGR3-201ENST00000248121 BRSK2Q8IWQ3 736 aa25.09■■□□□ 1.61
SYNGR3-201ENST00000248121 SLC35G2Q8TBE7 412 aa25.09■■□□□ 1.61
SYNGR3-201ENST00000248121 DNAJB3Q8WWF6 145 aa25.09■■□□□ 1.61
SYNGR3-201ENST00000248121 RFFLQ8WZ73 363 aa25.09■■□□□ 1.61
SYNGR3-201ENST00000248121 MS4A14Q96JA4 679 aa25.09■■□□□ 1.61
SYNGR3-201ENST00000248121 ISCUQ9H1K1 167 aa25.09■■□□□ 1.61
SYNGR3-201ENST00000248121 PTPRHQ9HD43 1115 aa25.09■■□□□ 1.61
SYNGR3-201ENST00000248121 FKTNO75072 461 aa25.09■■□□□ 1.61
SYNGR3-201ENST00000248121 CYP11B1P15538 503 aa25.09■■□□□ 1.61
SYNGR3-201ENST00000248121 PROZP22891 400 aa25.09■■□□□ 1.61
SYNGR3-201ENST00000248121 FMO1Q01740 532 aa25.09■■□□□ 1.61
SYNGR3-201ENST00000248121 MCL1Q07820 350 aa25.09■■□□□ 1.61
SYNGR3-201ENST00000248121 ATF7IP2Q5U623 682 aa25.09■■□□□ 1.61
SYNGR3-201ENST00000248121 SPOPLQ6IQ16 392 aa25.09■■□□□ 1.61
SYNGR3-201ENST00000248121 TMCO3Q6UWJ1 677 aa25.09■■□□□ 1.61
SYNGR3-201ENST00000248121 IFNLR1Q8IU57 520 aaPredicted RBP25.09■■□□□ 1.61
SYNGR3-201ENST00000248121 SCLT1Q96NL6 688 aa25.09■■□□□ 1.61
SYNGR3-201ENST00000248121 ADAMTS10Q9H324 1103 aa25.09■■□□□ 1.61
SYNGR3-201ENST00000248121 RNF216Q9NWF9 866 aaPredicted RBP25.09■■□□□ 1.61
SYNGR3-201ENST00000248121 CCDC151A5D8V7 595 aa25.08■■□□□ 1.61
SYNGR3-201ENST00000248121 ANKRD62A6NC57 917 aa25.08■■□□□ 1.61
SYNGR3-201ENST00000248121 MMEP08473 750 aa25.08■■□□□ 1.61
SYNGR3-201ENST00000248121 HOXC8P31273 242 aa25.08■■□□□ 1.61
SYNGR3-201ENST00000248121 VSNL1P62760 191 aa25.08■■□□□ 1.61
SYNGR3-201ENST00000248121 ITIH3Q06033 890 aa25.08■■□□□ 1.61
SYNGR3-201ENST00000248121 SPATA4Q8NEY3 305 aa25.08■■□□□ 1.61
SYNGR3-201ENST00000248121 CTNNBL1Q8WYA6 563 aaPredicted RBP25.08■■□□□ 1.61
SYNGR3-201ENST00000248121 DDX1Q92499 740 aaKnown RBP25.08■■□□□ 1.61
SYNGR3-201ENST00000248121 TCHPQ9BT92 498 aa25.08■■□□□ 1.61
SYNGR3-201ENST00000248121 APOBEC3GQ9HC16 384 aaKnown RBP25.08■■□□□ 1.61
SYNGR3-201ENST00000248121 C1orf112Q9NSG2 853 aa25.08■■□□□ 1.61
SYNGR3-201ENST00000248121 GPR32O75388 356 aa25.08■■□□□ 1.6
SYNGR3-201ENST00000248121 HOXD10P28358 340 aa25.08■■□□□ 1.6
SYNGR3-201ENST00000248121 PIK3CAP42336 1068 aa25.08■■□□□ 1.6
SYNGR3-201ENST00000248121 BIRC3Q13489 604 aa25.08■■□□□ 1.6
SYNGR3-201ENST00000248121 PTPROQ16827 1216 aa25.08■■□□□ 1.6
SYNGR3-201ENST00000248121 TSHZ1Q6ZSZ6 1077 aa25.08■■□□□ 1.6
SYNGR3-201ENST00000248121 KATNAL1Q9BW62 490 aa25.08■■□□□ 1.6
SYNGR3-201ENST00000248121 STXBP5LQ9Y2K9 1186 aa25.08■■□□□ 1.6
SYNGR3-201ENST00000248121 FTLP02792 175 aaPredicted RBP25.07■■□□□ 1.6
SYNGR3-201ENST00000248121 POU5F1BQ06416 359 aa25.07■■□□□ 1.6
SYNGR3-201ENST00000248121 BRD3Q15059 726 aa25.07■■□□□ 1.6
SYNGR3-201ENST00000248121 ENOSF1Q7L5Y1 443 aa25.07■■□□□ 1.6
SYNGR3-201ENST00000248121 TMEM192Q8IY95 271 aa25.07■■□□□ 1.6
SYNGR3-201ENST00000248121 OSMRQ99650 979 aa25.07■■□□□ 1.6
SYNGR3-201ENST00000248121 MTG1Q9BT17 334 aaPredicted RBP25.07■■□□□ 1.6
SYNGR3-201ENST00000248121 COG5Q9UP83 839 aa25.07■■□□□ 1.6
SYNGR3-201ENST00000248121 SMIM35A0A1B0GVV1 85 aa25.06■■□□□ 1.6
SYNGR3-201ENST00000248121 C17orf102A2RUQ5 167 aa25.06■■□□□ 1.6
SYNGR3-201ENST00000248121 SPDYE4A6NLX3 237 aa25.06■■□□□ 1.6
SYNGR3-201ENST00000248121 OGTO15294 1046 aa25.06■■□□□ 1.6
SYNGR3-201ENST00000248121 KIF4AO95239 1232 aa25.06■■□□□ 1.6
SYNGR3-201ENST00000248121 CALCAP01258 141 aa25.06■■□□□ 1.6
SYNGR3-201ENST00000248121 ASGR1P07306 291 aa25.06■■□□□ 1.6
SYNGR3-201ENST00000248121 KCNA10Q16322 511 aa25.06■■□□□ 1.6
SYNGR3-201ENST00000248121 NBPF20Q3BBV1 942 aa25.06■■□□□ 1.6
SYNGR3-201ENST00000248121 ZNF568Q3ZCX4 644 aa25.06■■□□□ 1.6
SYNGR3-201ENST00000248121 C7orf31Q8N865 590 aa25.06■■□□□ 1.6
SYNGR3-201ENST00000248121 KLHDC9Q8NEP7 349 aa25.06■■□□□ 1.6
SYNGR3-201ENST00000248121 PRMT7Q9NVM4 692 aaPredicted RBP25.06■■□□□ 1.6
SYNGR3-201ENST00000248121 FAM53CQ9NYF3 392 aa25.06■■□□□ 1.6
SYNGR3-201ENST00000248121 CPSF3Q9UKF6 684 aaKnown RBP25.06■■□□□ 1.6
SYNGR3-201ENST00000248121 BUB1BO60566 1050 aaPredicted RBP25.06■■□□□ 1.6
SYNGR3-201ENST00000248121 INHAP05111 366 aa25.06■■□□□ 1.6
SYNGR3-201ENST00000248121 ARF4P18085 180 aaPredicted RBP25.06■■□□□ 1.6
SYNGR3-201ENST00000248121 OSTNP61366 133 aa25.06■■□□□ 1.6
SYNGR3-201ENST00000248121 NKX3-2P78367 333 aa25.06■■□□□ 1.6
SYNGR3-201ENST00000248121 CCSAPQ6IQ19 270 aaPredicted RBP25.06■■□□□ 1.6
SYNGR3-201ENST00000248121 MPZL3Q6UWV2 235 aa25.06■■□□□ 1.6
SYNGR3-201ENST00000248121 MMGT1Q8N4V1 131 aa25.06■■□□□ 1.6
SYNGR3-201ENST00000248121 TMEM40Q8WWA1 233 aa25.06■■□□□ 1.6
SYNGR3-201ENST00000248121 CDT1Q9H211 546 aa25.06■■□□□ 1.6
SYNGR3-201ENST00000248121 CDR2Q01850 454 aa25.05■■□□□ 1.6
SYNGR3-201ENST00000248121 RPS6KA1Q15418 735 aa25.05■■□□□ 1.6
SYNGR3-201ENST00000248121 FAM187BQ17R55 369 aa25.05■■□□□ 1.6
SYNGR3-201ENST00000248121 TMEM132AQ24JP5 1023 aa25.05■■□□□ 1.6
SYNGR3-201ENST00000248121 NT5DC3Q86UY8 548 aa25.05■■□□□ 1.6
SYNGR3-201ENST00000248121 THNSL1Q8IYQ7 743 aa25.05■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms