RNA–Protein interactions for RNA: ENST00000230419.8

PTK7-202, Transcript of protein tyrosine kinase 7 (inactive), humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTK7, Length 4,272 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTK7-202ENST00000230419 FAM49BQ9NUQ9 324 aa17.75■□□□□ 0.43
PTK7-202ENST00000230419 CAND2O75155 1236 aa17.75■□□□□ 0.43
PTK7-202ENST00000230419 PSMD6Q15008 389 aa17.75■□□□□ 0.43
PTK7-202ENST00000230419 EPM2AIP1Q7L775 607 aaPredicted RBP17.75■□□□□ 0.43
PTK7-202ENST00000230419 SPATS2Q86XZ4 545 aaKnown RBP17.75■□□□□ 0.43
PTK7-202ENST00000230419 HVCN1Q96D96 273 aa17.75■□□□□ 0.43
PTK7-202ENST00000230419 RBM15Q96T37 977 aaKnown RBP eCLIP17.75■□□□□ 0.43
PTK7-202ENST00000230419 CARD9Q9H257 536 aa17.75■□□□□ 0.43
PTK7-202ENST00000230419 ADAMTSL3P82987 1691 aa17.75■□□□□ 0.43
PTK7-202ENST00000230419 PARP4Q9UKK3 1724 aaKnown RBP17.75■□□□□ 0.43
PTK7-202ENST00000230419 ARHGAP42A6NI28 874 aa17.75■□□□□ 0.43
PTK7-202ENST00000230419 MAP2K7O14733 419 aa17.75■□□□□ 0.43
PTK7-202ENST00000230419 CPP00450 1065 aa17.75■□□□□ 0.43
PTK7-202ENST00000230419 ADORA2BP29275 332 aa17.75■□□□□ 0.43
PTK7-202ENST00000230419 MAP2K2P36507 400 aa17.75■□□□□ 0.43
PTK7-202ENST00000230419 CDH6P55285 790 aa17.75■□□□□ 0.43
PTK7-202ENST00000230419 DCLK2Q8N568 766 aa17.75■□□□□ 0.43
PTK7-202ENST00000230419 ZSWIM1Q9BR11 485 aa17.75■□□□□ 0.43
PTK7-202ENST00000230419 EFCC1Q9HA90 598 aa17.75■□□□□ 0.43
PTK7-202ENST00000230419 KCND2Q9NZV8 630 aa17.75■□□□□ 0.43
PTK7-202ENST00000230419 AJAP1Q9UKB5 411 aaPredicted RBP17.75■□□□□ 0.43
PTK7-202ENST00000230419 PCDHB2Q9Y5E7 798 aa17.75■□□□□ 0.43
PTK7-202ENST00000230419 MED7O43513 233 aa17.75■□□□□ 0.43
PTK7-202ENST00000230419 OSBPP22059 807 aa17.75■□□□□ 0.43
PTK7-202ENST00000230419 RAP1GAPP47736 663 aa17.75■□□□□ 0.43
PTK7-202ENST00000230419 GPAT2Q6NUI2 795 aa17.75■□□□□ 0.43
PTK7-202ENST00000230419 TATDN1Q6P1N9 297 aa17.75■□□□□ 0.43
PTK7-202ENST00000230419 SLC13A5Q86YT5 568 aaPredicted RBP17.75■□□□□ 0.43
PTK7-202ENST00000230419 CCDC60Q8IWA6 550 aaPredicted RBP17.75■□□□□ 0.43
PTK7-202ENST00000230419 PPM1NQ8N819 430 aa17.75■□□□□ 0.43
PTK7-202ENST00000230419 DNAAF3Q8N9W5 541 aa17.75■□□□□ 0.43
PTK7-202ENST00000230419 SNED1Q8TER0 1413 aa17.75■□□□□ 0.43
PTK7-202ENST00000230419 SNF8Q96H20 258 aa17.75■□□□□ 0.43
PTK7-202ENST00000230419 SNX25Q9H3E2 840 aa17.75■□□□□ 0.43
PTK7-202ENST00000230419 SEMA4AQ9H3S1 761 aa17.75■□□□□ 0.43
PTK7-202ENST00000230419 RASSF10A6NK89 507 aa17.74■□□□□ 0.43
PTK7-202ENST00000230419 ADRB2P07550 413 aa17.74■□□□□ 0.43
PTK7-202ENST00000230419 PDGFRBP09619 1106 aa17.74■□□□□ 0.43
PTK7-202ENST00000230419 KRT3P12035 628 aa17.74■□□□□ 0.43
PTK7-202ENST00000230419 RFX1P22670 979 aa17.74■□□□□ 0.43
PTK7-202ENST00000230419 ITGA8P53708 1063 aa17.74■□□□□ 0.43
PTK7-202ENST00000230419 CCDC14Q49A88 953 aa17.74■□□□□ 0.43
PTK7-202ENST00000230419 RBM41Q96IZ5 413 aaKnown RBP17.74■□□□□ 0.43
PTK7-202ENST00000230419 EPN3Q9H201 632 aa17.74■□□□□ 0.43
PTK7-202ENST00000230419 AGAP1Q9UPQ3 857 aa17.74■□□□□ 0.43
PTK7-202ENST00000230419 CCDC160A6NGH7 325 aa17.74■□□□□ 0.43
PTK7-202ENST00000230419 M0QZ92 97 aa17.74■□□□□ 0.43
PTK7-202ENST00000230419 PLSCR1O15162 318 aa17.74■□□□□ 0.43
PTK7-202ENST00000230419 BAG2O95816 211 aa17.74■□□□□ 0.43
PTK7-202ENST00000230419 MAPK7Q13164 816 aa17.74■□□□□ 0.43
PTK7-202ENST00000230419 COPS5Q92905 334 aa17.74■□□□□ 0.43
PTK7-202ENST00000230419 SLC5A5Q92911 643 aa17.74■□□□□ 0.43
PTK7-202ENST00000230419 PRLRP16471 622 aa17.74■□□□□ 0.43
PTK7-202ENST00000230419 PSMC4P43686 418 aa17.74■□□□□ 0.43
PTK7-202ENST00000230419 SNX16P57768 344 aa17.74■□□□□ 0.43
PTK7-202ENST00000230419 SDCCAG8Q86SQ7 713 aaPredicted RBP17.74■□□□□ 0.43
PTK7-202ENST00000230419 CPNE8Q86YQ8 564 aa17.74■□□□□ 0.43
PTK7-202ENST00000230419 EMC1Q8N766 993 aa17.74■□□□□ 0.43
PTK7-202ENST00000230419 FAM81BQ96LP2 452 aa17.74■□□□□ 0.43
PTK7-202ENST00000230419 A1CFQ9NQ94 594 aaKnown RBP17.74■□□□□ 0.43
PTK7-202ENST00000230419 NLRP11P59045 1033 aaKnown RBP17.73■□□□□ 0.43
PTK7-202ENST00000230419 MAML1Q92585 1016 aa17.73■□□□□ 0.43
PTK7-202ENST00000230419 TGS1Q96RS0 853 aaKnown RBP17.73■□□□□ 0.43
PTK7-202ENST00000230419 VAV3Q9UKW4 847 aa17.73■□□□□ 0.43
PTK7-202ENST00000230419 ZNF142P52746 1687 aaPredicted RBP17.73■□□□□ 0.43
PTK7-202ENST00000230419 CCDC195A0A1B0GUA6 201 aa17.73■□□□□ 0.43
PTK7-202ENST00000230419 KITP10721 976 aa17.73■□□□□ 0.43
PTK7-202ENST00000230419 NOP9Q86U38 636 aaKnown RBP17.73■□□□□ 0.43
PTK7-202ENST00000230419 LNX1Q8TBB1 728 aaPredicted RBP17.73■□□□□ 0.43
PTK7-202ENST00000230419 SEPT1Q8WYJ6 367 aa17.73■□□□□ 0.43
PTK7-202ENST00000230419 GANQ9H2C0 597 aa17.73■□□□□ 0.43
PTK7-202ENST00000230419 FNDC3AQ9Y2H6 1198 aaKnown RBP17.73■□□□□ 0.43
PTK7-202ENST00000230419 IGSF9BQ9UPX0 1349 aa17.73■□□□□ 0.43
PTK7-202ENST00000230419 CCDC78A2IDD5 438 aa17.73■□□□□ 0.43
PTK7-202ENST00000230419 PYGMP11217 842 aa17.73■□□□□ 0.43
PTK7-202ENST00000230419 CCNA1P78396 465 aa17.73■□□□□ 0.43
PTK7-202ENST00000230419 ITKQ08881 620 aa17.73■□□□□ 0.43
PTK7-202ENST00000230419 HGSNATQ68CP4 663 aa17.73■□□□□ 0.43
PTK7-202ENST00000230419 ATL2Q8NHH9 583 aa17.73■□□□□ 0.43
PTK7-202ENST00000230419 KIF12Q96FN5 646 aa17.73■□□□□ 0.43
PTK7-202ENST00000230419 PWWP2AQ96N64 755 aa17.73■□□□□ 0.43
PTK7-202ENST00000230419 MMP19Q99542 508 aa17.73■□□□□ 0.43
PTK7-202ENST00000230419 SLC13A1Q9BZW2 595 aa17.73■□□□□ 0.43
PTK7-202ENST00000230419 LRRC4Q9HBW1 653 aa17.73■□□□□ 0.43
PTK7-202ENST00000230419 UVRAGQ9P2Y5 699 aa17.73■□□□□ 0.43
PTK7-202ENST00000230419 SNX9Q9Y5X1 595 aa17.73■□□□□ 0.43
PTK7-202ENST00000230419 TBXAS1P24557 533 aaPredicted RBP17.72■□□□□ 0.43
PTK7-202ENST00000230419 COILP38432 576 aaPredicted RBP17.72■□□□□ 0.43
PTK7-202ENST00000230419 CDH8P55286 799 aa17.72■□□□□ 0.43
PTK7-202ENST00000230419 APOBEC3FQ8IUX4 373 aaKnown RBP17.72■□□□□ 0.43
PTK7-202ENST00000230419 PARVAQ9NVD7 372 aa17.72■□□□□ 0.43
PTK7-202ENST00000230419 TOM1L1O75674 476 aa17.72■□□□□ 0.43
PTK7-202ENST00000230419 CALB1P05937 261 aa17.72■□□□□ 0.43
PTK7-202ENST00000230419 MYO1EQ12965 1108 aa17.72■□□□□ 0.43
PTK7-202ENST00000230419 IRF2BP2Q7Z5L9 587 aa17.72■□□□□ 0.43
PTK7-202ENST00000230419 CALR3Q96L12 384 aaKnown RBP17.72■□□□□ 0.43
PTK7-202ENST00000230419 FGFR1OP2Q9NVK5 253 aa17.72■□□□□ 0.43
PTK7-202ENST00000230419 MEFVO15553 781 aaPredicted RBP17.72■□□□□ 0.43
PTK7-202ENST00000230419 FAXCQ5TGI0 409 aa17.72■□□□□ 0.43
PTK7-202ENST00000230419 NT5DC3Q86UY8 548 aa17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms