RNA–Protein interactions for RNA: ENSMUST00000057185.12

Pcdh1-201, Transcript of Protocadherin 1 (Fragment), mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcdh1, Length 3,902 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1-201ENSMUST00000057185 Gadd45gQ9Z111 159 aa10.3□□□□□ -0.76
Pcdh1-201ENSMUST00000057185 Ror2Q9Z138 944 aa10.3□□□□□ -0.76
Pcdh1-201ENSMUST00000057185 Crlf3Q9Z2L7 442 aa10.3□□□□□ -0.76
Pcdh1-201ENSMUST00000057185 Gm29133A0A1B0GT72 266 aa10.3□□□□□ -0.76
Pcdh1-201ENSMUST00000057185 Bpifb9bA2AJD1 591 aa10.3□□□□□ -0.76
Pcdh1-201ENSMUST00000057185 Cdr1E9Q0B4 517 aa10.3□□□□□ -0.76
Pcdh1-201ENSMUST00000057185 Cbfa2t2O70374 594 aa10.3□□□□□ -0.76
Pcdh1-201ENSMUST00000057185 Magea6O89010 325 aa10.3□□□□□ -0.76
Pcdh1-201ENSMUST00000057185 Serpina1aP07758 413 aa10.3□□□□□ -0.76
Pcdh1-201ENSMUST00000057185 Psmc4P54775 418 aa10.3□□□□□ -0.76
Pcdh1-201ENSMUST00000057185 Serpina1cQ00896 412 aa10.3□□□□□ -0.76
Pcdh1-201ENSMUST00000057185 Serpina1dQ00897 413 aa10.3□□□□□ -0.76
Pcdh1-201ENSMUST00000057185 InhbaQ04998 424 aa10.3□□□□□ -0.76
Pcdh1-201ENSMUST00000057185 Ece1Q4PZA2 769 aa10.3□□□□□ -0.76
Pcdh1-201ENSMUST00000057185 HnrnpdQ60668 355 aaKnown RBP10.3□□□□□ -0.76
Pcdh1-201ENSMUST00000057185 ChukQ60680 745 aa10.3□□□□□ -0.76
Pcdh1-201ENSMUST00000057185 Pcsk7Q61139 770 aa10.3□□□□□ -0.76
Pcdh1-201ENSMUST00000057185 Magea3Q6T340 320 aa10.3□□□□□ -0.76
Pcdh1-201ENSMUST00000057185 Ssxb5Q6XAS2 159 aa10.3□□□□□ -0.76
Pcdh1-201ENSMUST00000057185 Bpifb9aQ80XI7 591 aa10.3□□□□□ -0.76
Pcdh1-201ENSMUST00000057185 Ccdc40Q8BI79 1192 aa10.3□□□□□ -0.76
Pcdh1-201ENSMUST00000057185 Ipo5Q8BKC5 1097 aaKnown RBP10.3□□□□□ -0.76
Pcdh1-201ENSMUST00000057185 MslnlQ8C160 685 aa10.3□□□□□ -0.76
Pcdh1-201ENSMUST00000057185 Lrrc42Q8R2U7 421 aa10.3□□□□□ -0.76
Pcdh1-201ENSMUST00000057185 Olfr390Q8VEZ7 311 aa10.3□□□□□ -0.76
Pcdh1-201ENSMUST00000057185 Olfr1502Q8VG66 316 aa10.3□□□□□ -0.76
Pcdh1-201ENSMUST00000057185 Gps1Q99LD4 471 aaKnown RBP10.3□□□□□ -0.76
Pcdh1-201ENSMUST00000057185 Rasgef1cQ9D300 466 aa10.3□□□□□ -0.76
Pcdh1-201ENSMUST00000057185 Ltbp1Q8CG19 1712 aa10.3□□□□□ -0.76
Pcdh1-201ENSMUST00000057185 Glt1d1A4FUP9 346 aa10.3□□□□□ -0.76
Pcdh1-201ENSMUST00000057185 Cyp2c69E9PXC3 491 aa10.3□□□□□ -0.76
Pcdh1-201ENSMUST00000057185 Gm10436L7N1Y3 520 aa10.3□□□□□ -0.76
Pcdh1-201ENSMUST00000057185 Rnaseh1O70338 285 aa10.3□□□□□ -0.76
Pcdh1-201ENSMUST00000057185 AfpP02772 605 aa10.3□□□□□ -0.76
Pcdh1-201ENSMUST00000057185 Akr1b7P21300 316 aa10.3□□□□□ -0.76
Pcdh1-201ENSMUST00000057185 Slc1a1P51906 523 aa10.3□□□□□ -0.76
Pcdh1-201ENSMUST00000057185 Cyp2c40P56657 491 aa10.3□□□□□ -0.76
Pcdh1-201ENSMUST00000057185 PhbP67778 272 aaKnown RBP10.3□□□□□ -0.76
Pcdh1-201ENSMUST00000057185 Rit2P70425 217 aa10.3□□□□□ -0.76
Pcdh1-201ENSMUST00000057185 Mylk3Q3UIZ8 795 aa10.3□□□□□ -0.76
Pcdh1-201ENSMUST00000057185 Rmdn3Q3UJU9 470 aa10.3□□□□□ -0.76
Pcdh1-201ENSMUST00000057185 AmphQ7TQF7 686 aa10.3□□□□□ -0.76
Pcdh1-201ENSMUST00000057185 Ubap1Q8BH48 502 aa10.3□□□□□ -0.76
Pcdh1-201ENSMUST00000057185 Btnl9Q8BJE2 536 aa10.3□□□□□ -0.76
Pcdh1-201ENSMUST00000057185 Apol7cQ8C6E1 369 aa10.3□□□□□ -0.76
Pcdh1-201ENSMUST00000057185 Abhd8Q8R0P8 439 aa10.3□□□□□ -0.76
Pcdh1-201ENSMUST00000057185 Cox16Q9CR63 106 aa10.3□□□□□ -0.76
Pcdh1-201ENSMUST00000057185 Vmn2r63E9Q0K5 859 aa10.29□□□□□ -0.76
Pcdh1-201ENSMUST00000057185 Gm9268E9Q0M3 861 aa10.29□□□□□ -0.76
Pcdh1-201ENSMUST00000057185 Vmn2r62K7N712 859 aa10.29□□□□□ -0.76
Pcdh1-201ENSMUST00000057185 Cap1P40124 474 aa10.29□□□□□ -0.76
Pcdh1-201ENSMUST00000057185 Cops2P61202 443 aaKnown RBP10.29□□□□□ -0.76
Pcdh1-201ENSMUST00000057185 Stx2Q00262 289 aa10.29□□□□□ -0.76
Pcdh1-201ENSMUST00000057185 9130409I23RikQ3TS87 320 aa10.29□□□□□ -0.76
Pcdh1-201ENSMUST00000057185 Q3UJP5 209 aa10.29□□□□□ -0.76
Pcdh1-201ENSMUST00000057185 Gprin1Q3UNH4 932 aa10.29□□□□□ -0.76
Pcdh1-201ENSMUST00000057185 Zbtb16Q3UQ17 673 aa10.29□□□□□ -0.76
Pcdh1-201ENSMUST00000057185 Grik5Q61626 979 aa10.29□□□□□ -0.76
Pcdh1-201ENSMUST00000057185 Pgrmc2Q80UU9 217 aaKnown RBP10.29□□□□□ -0.76
Pcdh1-201ENSMUST00000057185 Adgra1Q8C4G9 578 aa10.29□□□□□ -0.76
Pcdh1-201ENSMUST00000057185 Cabs1Q8C633 391 aa10.29□□□□□ -0.76
Pcdh1-201ENSMUST00000057185 Pkn3Q8K045 878 aa10.29□□□□□ -0.76
Pcdh1-201ENSMUST00000057185 Mrps22Q9CXW2 359 aa10.29□□□□□ -0.76
Pcdh1-201ENSMUST00000057185 Gins2Q9D600 185 aa10.29□□□□□ -0.76
Pcdh1-201ENSMUST00000057185 Ecm29Q6PDI5 1840 aa10.29□□□□□ -0.76
Pcdh1-201ENSMUST00000057185 Marf1Q8BJ34 1730 aaKnown RBP10.29□□□□□ -0.76
Pcdh1-201ENSMUST00000057185 Mmp20P57748 482 aa10.29□□□□□ -0.76
Pcdh1-201ENSMUST00000057185 Siah1bQ06985 282 aa10.29□□□□□ -0.76
Pcdh1-201ENSMUST00000057185 Lrch2Q3UMG5 773 aa10.29□□□□□ -0.76
Pcdh1-201ENSMUST00000057185 Oog4Q4G0C7 502 aa10.29□□□□□ -0.76
Pcdh1-201ENSMUST00000057185 LnpkQ7TQ95 425 aa10.29□□□□□ -0.76
Pcdh1-201ENSMUST00000057185 Ppfia2Q8BSS9 1257 aa10.29□□□□□ -0.76
Pcdh1-201ENSMUST00000057185 Osbpl2Q8BX94 484 aa10.29□□□□□ -0.76
Pcdh1-201ENSMUST00000057185 Arhgap24Q8C4V1 747 aa10.29□□□□□ -0.76
Pcdh1-201ENSMUST00000057185 Usp20Q8C6M1 916 aa10.29□□□□□ -0.76
Pcdh1-201ENSMUST00000057185 Ccdc134Q8C7V8 229 aa10.29□□□□□ -0.76
Pcdh1-201ENSMUST00000057185 Pcdha10Q91Y20 946 aa10.29□□□□□ -0.76
Pcdh1-201ENSMUST00000057185 Nsmce3Q9CPR8 279 aa10.29□□□□□ -0.76
Pcdh1-201ENSMUST00000057185 Mms19Q9D071 1031 aa10.29□□□□□ -0.76
Pcdh1-201ENSMUST00000057185 Slc5a4aQ9ET37 656 aa10.29□□□□□ -0.76
Pcdh1-201ENSMUST00000057185 Plagl1Q9JLQ4 704 aa10.29□□□□□ -0.76
Pcdh1-201ENSMUST00000057185 EloblA6PWE0 161 aa10.29□□□□□ -0.76
Pcdh1-201ENSMUST00000057185 Atp9aO70228 1047 aa10.29□□□□□ -0.76
Pcdh1-201ENSMUST00000057185 Ctnnal1O88327 731 aa10.29□□□□□ -0.76
Pcdh1-201ENSMUST00000057185 Cyth2P63034 400 aaKnown RBP10.29□□□□□ -0.76
Pcdh1-201ENSMUST00000057185 Trim43bP86448 445 aa10.29□□□□□ -0.76
Pcdh1-201ENSMUST00000057185 Smarcad1Q04692 1021 aa10.29□□□□□ -0.76
Pcdh1-201ENSMUST00000057185 Capn13Q3UW68 665 aa10.29□□□□□ -0.76
Pcdh1-201ENSMUST00000057185 Ppp2r5cQ60996 524 aa10.29□□□□□ -0.76
Pcdh1-201ENSMUST00000057185 Ythdf3Q8BYK6 585 aaKnown RBP10.29□□□□□ -0.76
Pcdh1-201ENSMUST00000057185 Kbtbd13Q8C828 458 aa10.29□□□□□ -0.76
Pcdh1-201ENSMUST00000057185 Zbtb44Q8R0A2 453 aa10.29□□□□□ -0.76
Pcdh1-201ENSMUST00000057185 Vmn1r199Q8R280 367 aa10.29□□□□□ -0.76
Pcdh1-201ENSMUST00000057185 HlcsQ920N2 722 aa10.29□□□□□ -0.76
Pcdh1-201ENSMUST00000057185 Rnf112Q96DY5 654 aa10.29□□□□□ -0.76
Pcdh1-201ENSMUST00000057185 Sec14l2Q99J08 403 aa10.29□□□□□ -0.76
Pcdh1-201ENSMUST00000057185 Sytl1Q99N80 567 aa10.29□□□□□ -0.76
Pcdh1-201ENSMUST00000057185 Tdrd12Q9CWU0 1215 aa10.29□□□□□ -0.76
Pcdh1-201ENSMUST00000057185 Tcp11x2A2AEI7 503 aa10.28□□□□□ -0.76
Pcdh1-201ENSMUST00000057185 Ttll6A4Q9E8 822 aa10.28□□□□□ -0.76
Retrieved 100 of 22,080 RNA–protein pairs in 26.9 ms