RNA–Protein interactions for RNA: ENSMUST00000053871.4

Ckap4-201, Transcript of Cytoskeleton-associated protein 4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ckap4, Length 3,089 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ckap4-201ENSMUST00000053871 SnrpfP62307 86 aaKnown RBP17.02■□□□□ 0.31
Ckap4-201ENSMUST00000053871 Irx1P81068 480 aa17.02■□□□□ 0.31
Ckap4-201ENSMUST00000053871 Lig3P97386 1015 aa17.02■□□□□ 0.31
Ckap4-201ENSMUST00000053871 Cdca2Q14B71 982 aaKnown RBP17.02■□□□□ 0.31
Ckap4-201ENSMUST00000053871 Tmem120bQ3TA38 339 aa17.02■□□□□ 0.31
Ckap4-201ENSMUST00000053871 Skap1Q3UUV5 355 aa17.02■□□□□ 0.31
Ckap4-201ENSMUST00000053871 Cnksr2Q80YA9 1032 aa17.02■□□□□ 0.31
Ckap4-201ENSMUST00000053871 Ccdc50Q810U5 305 aaKnown RBP17.02■□□□□ 0.31
Ckap4-201ENSMUST00000053871 IqcdQ9D3V1 458 aa17.02■□□□□ 0.31
Ckap4-201ENSMUST00000053871 Gm13084A2A8N0 494 aa17.01■□□□□ 0.31
Ckap4-201ENSMUST00000053871 Patl2A2ARM1 529 aa17.01■□□□□ 0.31
Ckap4-201ENSMUST00000053871 Serpinb6eI7HJI3 429 aa17.01■□□□□ 0.31
Ckap4-201ENSMUST00000053871 Runx2Q08775 607 aa17.01■□□□□ 0.31
Ckap4-201ENSMUST00000053871 Ece1Q4PZA2 769 aa17.01■□□□□ 0.31
Ckap4-201ENSMUST00000053871 Azin2Q8BVM4 459 aa17.01■□□□□ 0.31
Ckap4-201ENSMUST00000053871 Ttc1Q91Z38 292 aa17.01■□□□□ 0.31
Ckap4-201ENSMUST00000053871 Sec14l2Q99J08 403 aa17.01■□□□□ 0.31
Ckap4-201ENSMUST00000053871 Kcnq4Q9JK97 696 aa17.01■□□□□ 0.31
Ckap4-201ENSMUST00000053871 Lrrc63A6H694 637 aa17.01■□□□□ 0.31
Ckap4-201ENSMUST00000053871 Il2rbP16297 539 aa17.01■□□□□ 0.31
Ckap4-201ENSMUST00000053871 Dzip3Q7TPV2 1204 aa17.01■□□□□ 0.31
Ckap4-201ENSMUST00000053871 Zswim6Q80TB7 1207 aa17.01■□□□□ 0.31
Ckap4-201ENSMUST00000053871 Stoml1Q8CI66 399 aa17.01■□□□□ 0.31
Ckap4-201ENSMUST00000053871 DnerQ8JZM4 737 aa17.01■□□□□ 0.31
Ckap4-201ENSMUST00000053871 Usp33Q8R5K2 909 aa17.01■□□□□ 0.31
Ckap4-201ENSMUST00000053871 Pcdha2Q91Y17 948 aa17.01■□□□□ 0.31
Ckap4-201ENSMUST00000053871 RpainQ9CWY9 219 aa17.01■□□□□ 0.31
Ckap4-201ENSMUST00000053871 Mtmr1Q9Z2C4 669 aa17.01■□□□□ 0.31
Ckap4-201ENSMUST00000053871 Psme4Q5SSW2 1843 aa17.01■□□□□ 0.31
Ckap4-201ENSMUST00000053871 Myh9Q8VDD5 1960 aaKnown RBP17.01■□□□□ 0.31
Ckap4-201ENSMUST00000053871 Clca3bE9PUL3 1044 aa17■□□□□ 0.31
Ckap4-201ENSMUST00000053871 Cyp4f40G3UW81 524 aa17■□□□□ 0.31
Ckap4-201ENSMUST00000053871 Aff1O88573 1216 aa17■□□□□ 0.31
Ckap4-201ENSMUST00000053871 Krt8P11679 490 aaKnown RBP17■□□□□ 0.31
Ckap4-201ENSMUST00000053871 Fgl2P12804 432 aa17■□□□□ 0.31
Ckap4-201ENSMUST00000053871 Tff2Q03404 129 aa17■□□□□ 0.31
Ckap4-201ENSMUST00000053871 Elf1Q60775 612 aa17■□□□□ 0.31
Ckap4-201ENSMUST00000053871 Myo6Q64331 1265 aa17■□□□□ 0.31
Ckap4-201ENSMUST00000053871 Usp11Q99K46 921 aa17■□□□□ 0.31
Ckap4-201ENSMUST00000053871 Hsf2bpQ9D4G2 338 aa17■□□□□ 0.31
Ckap4-201ENSMUST00000053871 Gm5795E9PZN8 263 aa17■□□□□ 0.31
Ckap4-201ENSMUST00000053871 Gm45837F7D3W5 961 aa17■□□□□ 0.31
Ckap4-201ENSMUST00000053871 Gm21962L7N280 338 aa17■□□□□ 0.31
Ckap4-201ENSMUST00000053871 Cacna2d1O08532 1103 aa17■□□□□ 0.31
Ckap4-201ENSMUST00000053871 Diaph2O70566 1098 aa17■□□□□ 0.31
Ckap4-201ENSMUST00000053871 Tspyl1O88852 379 aa17■□□□□ 0.31
Ckap4-201ENSMUST00000053871 Rhox5P52651 210 aa17■□□□□ 0.31
Ckap4-201ENSMUST00000053871 Rnf10Q3UIW5 804 aa17■□□□□ 0.31
Ckap4-201ENSMUST00000053871 Cracr2aQ3UP38 310 aa17■□□□□ 0.31
Ckap4-201ENSMUST00000053871 Dus1lQ8C2P3 475 aa17■□□□□ 0.31
Ckap4-201ENSMUST00000053871 Smtnl2Q8CI12 456 aa17■□□□□ 0.31
Ckap4-201ENSMUST00000053871 SncbQ91ZZ3 133 aa17■□□□□ 0.31
Ckap4-201ENSMUST00000053871 Pde2aQ922S4 916 aa17■□□□□ 0.31
Ckap4-201ENSMUST00000053871 HgsQ99LI8 775 aa17■□□□□ 0.31
Ckap4-201ENSMUST00000053871 SerhlQ9EPB5 311 aa17■□□□□ 0.31
Ckap4-201ENSMUST00000053871 Ep400Q8CHI8 3072 aaKnown RBP17■□□□□ 0.31
Ckap4-201ENSMUST00000053871 2210011C24RikA0A087WQ89 206 aa17■□□□□ 0.31
Ckap4-201ENSMUST00000053871 Pgap3A2A559 320 aa17■□□□□ 0.31
Ckap4-201ENSMUST00000053871 Gm5936A2BG95 728 aa17■□□□□ 0.31
Ckap4-201ENSMUST00000053871 Gm5640A3KG49 728 aa17■□□□□ 0.31
Ckap4-201ENSMUST00000053871 Kcnk16G5E845 292 aa17■□□□□ 0.31
Ckap4-201ENSMUST00000053871 Gm5814J3QP80 125 aa17■□□□□ 0.31
Ckap4-201ENSMUST00000053871 Casq2O09161 415 aa17■□□□□ 0.31
Ckap4-201ENSMUST00000053871 CopeO89079 308 aa17■□□□□ 0.31
Ckap4-201ENSMUST00000053871 L1camP11627 1260 aa17■□□□□ 0.31
Ckap4-201ENSMUST00000053871 Taf1bP97358 586 aa17■□□□□ 0.31
Ckap4-201ENSMUST00000053871 SpertQ32MG2 446 aa17■□□□□ 0.31
Ckap4-201ENSMUST00000053871 Nlrp14Q6B966 993 aa17■□□□□ 0.31
Ckap4-201ENSMUST00000053871 Pgm5Q8BZF8 567 aa17■□□□□ 0.31
Ckap4-201ENSMUST00000053871 Lrrc42Q8R2U7 421 aa17■□□□□ 0.31
Ckap4-201ENSMUST00000053871 Nrbp2Q91V36 499 aa17■□□□□ 0.31
Ckap4-201ENSMUST00000053871 Mrfap1Q9CQL7 125 aa17■□□□□ 0.31
Ckap4-201ENSMUST00000053871 TarsQ9D0R2 722 aaKnown RBP17■□□□□ 0.31
Ckap4-201ENSMUST00000053871 Cntn6Q9JMB8 1028 aa17■□□□□ 0.31
Ckap4-201ENSMUST00000053871 Serpinb6cW4VSP4 379 aa17■□□□□ 0.31
Ckap4-201ENSMUST00000053871 Gm7995L7N2E4 160 aa16.99■□□□□ 0.31
Ckap4-201ENSMUST00000053871 PtpraP18052 829 aa16.99■□□□□ 0.31
Ckap4-201ENSMUST00000053871 Taok1Q5F2E8 1001 aa16.99■□□□□ 0.31
Ckap4-201ENSMUST00000053871 Sv2cQ69ZS6 727 aa16.99■□□□□ 0.31
Ckap4-201ENSMUST00000053871 Sec23ipQ6NZC7 998 aa16.99■□□□□ 0.31
Ckap4-201ENSMUST00000053871 Serpinb3dQ6UKZ0 387 aa16.99■□□□□ 0.31
Ckap4-201ENSMUST00000053871 Kcnk18Q6VV64 394 aa16.99■□□□□ 0.31
Ckap4-201ENSMUST00000053871 Mapk15Q80Y86 549 aa16.99■□□□□ 0.31
Ckap4-201ENSMUST00000053871 Rhot1Q8BG51 631 aa16.99■□□□□ 0.31
Ckap4-201ENSMUST00000053871 B3glctQ8BHT6 489 aa16.99■□□□□ 0.31
Ckap4-201ENSMUST00000053871 Znf467Q8JZL0 594 aa16.99■□□□□ 0.31
Ckap4-201ENSMUST00000053871 Psmd6Q99JI4 389 aa16.99■□□□□ 0.31
Ckap4-201ENSMUST00000053871 Q9CYI0 393 aa16.99■□□□□ 0.31
Ckap4-201ENSMUST00000053871 Gtf3c6Q9D8P7 227 aa16.99■□□□□ 0.31
Ckap4-201ENSMUST00000053871 Map3k20Q9ESL4 802 aaKnown RBP16.99■□□□□ 0.31
Ckap4-201ENSMUST00000053871 Smok2bQ9QYZ3 484 aa16.99■□□□□ 0.31
Ckap4-201ENSMUST00000053871 Smok2aQ9QYZ6 504 aa16.99■□□□□ 0.31
Ckap4-201ENSMUST00000053871 Tmed2Q9R0Q3 201 aa16.99■□□□□ 0.31
Ckap4-201ENSMUST00000053871 Arih1Q9Z1K5 555 aa16.99■□□□□ 0.31
Ckap4-201ENSMUST00000053871 Rfx8D3YU81 596 aa16.99■□□□□ 0.31
Ckap4-201ENSMUST00000053871 Msh2P43247 935 aaKnown RBP16.99■□□□□ 0.31
Ckap4-201ENSMUST00000053871 Atp13a5Q3TYU2 1216 aa16.99■□□□□ 0.31
Ckap4-201ENSMUST00000053871 Syne3Q4FZC9 975 aa16.99■□□□□ 0.31
Ckap4-201ENSMUST00000053871 Myl6Q60605 151 aaKnown RBP16.99■□□□□ 0.31
Ckap4-201ENSMUST00000053871 SnphQ80U23 495 aa16.99■□□□□ 0.31
Retrieved 100 of 22,080 RNA–protein pairs in 47.6 ms