RNA–Protein interactions for RNA: ENSMUST00000047835.7

Scaf11-201, Transcript of SR-related CTD-associated factor 11, mousemouse

TSL 5 BASIC

Gene Scaf11, Length 5,766 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf11-201ENSMUST00000047835 Usp17leQ7M764 540 aa19.35■□□□□ 0.69
Scaf11-201ENSMUST00000047835 AgtP11859 477 aa19.35■□□□□ 0.69
Scaf11-201ENSMUST00000047835 Vps4bP46467 444 aaKnown RBP19.35■□□□□ 0.69
Scaf11-201ENSMUST00000047835 Gjd4Q8BSD4 364 aa19.35■□□□□ 0.69
Scaf11-201ENSMUST00000047835 Shcbp1Q9Z179 668 aa19.35■□□□□ 0.69
Scaf11-201ENSMUST00000047835 Pnpla7A2AJ88 1352 aa19.35■□□□□ 0.69
Scaf11-201ENSMUST00000047835 Anxa5P48036 319 aa19.35■□□□□ 0.69
Scaf11-201ENSMUST00000047835 S100a5P63084 93 aa19.35■□□□□ 0.69
Scaf11-201ENSMUST00000047835 Col6a1Q04857 1025 aa19.35■□□□□ 0.69
Scaf11-201ENSMUST00000047835 Nt5c2Q3V1L4 560 aa19.35■□□□□ 0.69
Scaf11-201ENSMUST00000047835 SpdyaQ5IBH7 310 aa19.35■□□□□ 0.69
Scaf11-201ENSMUST00000047835 CttnQ60598 546 aaKnown RBP19.35■□□□□ 0.69
Scaf11-201ENSMUST00000047835 Dlg1Q811D0 905 aaKnown RBP19.35■□□□□ 0.69
Scaf11-201ENSMUST00000047835 PdgfdQ925I7 370 aa19.35■□□□□ 0.69
Scaf11-201ENSMUST00000047835 Cdk5rap3Q99LM2 503 aa19.35■□□□□ 0.69
Scaf11-201ENSMUST00000047835 Pcyox1Q9CQF9 505 aa19.35■□□□□ 0.69
Scaf11-201ENSMUST00000047835 Eef1akmt2Q9D853 244 aa19.35■□□□□ 0.69
Scaf11-201ENSMUST00000047835 Ism1A2ATD1 454 aa19.35■□□□□ 0.69
Scaf11-201ENSMUST00000047835 March10E9PX79 788 aa19.35■□□□□ 0.69
Scaf11-201ENSMUST00000047835 Ap1g2O88512 791 aa19.35■□□□□ 0.69
Scaf11-201ENSMUST00000047835 Sox10Q04888 466 aa19.35■□□□□ 0.69
Scaf11-201ENSMUST00000047835 Klra9Q2TJJ8 266 aa19.35■□□□□ 0.69
Scaf11-201ENSMUST00000047835 Trim62Q80V85 475 aa19.35■□□□□ 0.69
Scaf11-201ENSMUST00000047835 Sh3bp5lQ99LH9 392 aa19.35■□□□□ 0.69
Scaf11-201ENSMUST00000047835 Borcs6Q9D6W8 360 aa19.35■□□□□ 0.69
Scaf11-201ENSMUST00000047835 Calr3Q9D9Q6 380 aa19.35■□□□□ 0.69
Scaf11-201ENSMUST00000047835 Gm4871D3Z0W7 314 aa19.34■□□□□ 0.69
Scaf11-201ENSMUST00000047835 Nkx1-1G3UXB3 402 aa19.34■□□□□ 0.69
Scaf11-201ENSMUST00000047835 AF366264G3X9P9 502 aa19.34■□□□□ 0.69
Scaf11-201ENSMUST00000047835 Rad54lP70270 747 aa19.34■□□□□ 0.69
Scaf11-201ENSMUST00000047835 Itih3Q61704 889 aa19.34■□□□□ 0.69
Scaf11-201ENSMUST00000047835 Gm7247Q6UY52 187 aa19.34■□□□□ 0.69
Scaf11-201ENSMUST00000047835 Olfr805Q8VFI4 319 aa19.34■□□□□ 0.69
Scaf11-201ENSMUST00000047835 Msi2Q920Q6 346 aaKnown RBP19.34■□□□□ 0.69
Scaf11-201ENSMUST00000047835 Osbpl9A2A8Z1 736 aa19.34■□□□□ 0.69
Scaf11-201ENSMUST00000047835 Zfand4D3Z3C6 739 aa19.34■□□□□ 0.69
Scaf11-201ENSMUST00000047835 Cyp4f17G3UW78 524 aa19.34■□□□□ 0.69
Scaf11-201ENSMUST00000047835 Serpinb9O08797 374 aa19.34■□□□□ 0.69
Scaf11-201ENSMUST00000047835 Kcnn2P58390 839 aa19.34■□□□□ 0.69
Scaf11-201ENSMUST00000047835 Hspa8P63017 646 aaKnown RBP19.34■□□□□ 0.69
Scaf11-201ENSMUST00000047835 Rps6kc1Q8BLK9 1056 aa19.34■□□□□ 0.69
Scaf11-201ENSMUST00000047835 Cyp4f16Q99N17 524 aa19.34■□□□□ 0.69
Scaf11-201ENSMUST00000047835 Thumpd2Q9CZB3 528 aa19.34■□□□□ 0.69
Scaf11-201ENSMUST00000047835 Magea8O89012 320 aa19.34■□□□□ 0.69
Scaf11-201ENSMUST00000047835 Stmn1P54227 149 aaKnown RBP19.34■□□□□ 0.69
Scaf11-201ENSMUST00000047835 SelpQ01102 768 aa19.34■□□□□ 0.69
Scaf11-201ENSMUST00000047835 Olfr8Q60892 310 aa19.34■□□□□ 0.69
Scaf11-201ENSMUST00000047835 Myo6Q64331 1265 aa19.34■□□□□ 0.69
Scaf11-201ENSMUST00000047835 Adck2Q6NSR3 617 aa19.34■□□□□ 0.69
Scaf11-201ENSMUST00000047835 UvragQ8K245 698 aa19.34■□□□□ 0.69
Scaf11-201ENSMUST00000047835 Znf541Q0GGX2 1363 aa19.34■□□□□ 0.69
Scaf11-201ENSMUST00000047835 Zfp850J3QPC5 689 aa19.34■□□□□ 0.69
Scaf11-201ENSMUST00000047835 Meis3P97368 378 aa19.34■□□□□ 0.69
Scaf11-201ENSMUST00000047835 Prl2c1Q5SVL9 228 aa19.34■□□□□ 0.69
Scaf11-201ENSMUST00000047835 FAM120AQ6A0A9 1112 aaKnown RBP19.34■□□□□ 0.69
Scaf11-201ENSMUST00000047835 Gemin4Q6P6L6 1058 aaKnown RBP19.34■□□□□ 0.69
Scaf11-201ENSMUST00000047835 Pcdha9Q91Y11 979 aa19.34■□□□□ 0.69
Scaf11-201ENSMUST00000047835 Dcaf6Q9DC22 876 aa19.34■□□□□ 0.69
Scaf11-201ENSMUST00000047835 Gm43302L7N1X8 611 aa19.34■□□□□ 0.69
Scaf11-201ENSMUST00000047835 Gbp10Q000W5 611 aa19.34■□□□□ 0.69
Scaf11-201ENSMUST00000047835 Rpf2Q9JJ80 306 aaKnown RBP19.34■□□□□ 0.69
Scaf11-201ENSMUST00000047835 Vsnl1P62761 191 aa19.33■□□□□ 0.69
Scaf11-201ENSMUST00000047835 Atp13a4Q5XF90 1193 aa19.33■□□□□ 0.69
Scaf11-201ENSMUST00000047835 Smarca1Q6PGB8 1046 aa19.33■□□□□ 0.69
Scaf11-201ENSMUST00000047835 Ddx18Q8K363 660 aaKnown RBP19.33■□□□□ 0.69
Scaf11-201ENSMUST00000047835 Cadm1Q8R5M8 456 aaKnown RBP19.33■□□□□ 0.69
Scaf11-201ENSMUST00000047835 Washc1Q8VDD8 475 aa19.33■□□□□ 0.69
Scaf11-201ENSMUST00000047835 Rabgef1Q9JM13 491 aa19.33■□□□□ 0.69
Scaf11-201ENSMUST00000047835 PolkQ9QUG2 852 aa19.33■□□□□ 0.69
Scaf11-201ENSMUST00000047835 Ddx39bQ9Z1N5 428 aaKnown RBP19.33■□□□□ 0.69
Scaf11-201ENSMUST00000047835 Gm28036V9GXJ1 658 aa19.33■□□□□ 0.69
Scaf11-201ENSMUST00000047835 Cav1P49817 178 aa19.33■□□□□ 0.69
Scaf11-201ENSMUST00000047835 Entpd7Q3TCT4 606 aa19.33■□□□□ 0.69
Scaf11-201ENSMUST00000047835 Wdr35Q8BND3 1181 aa19.33■□□□□ 0.69
Scaf11-201ENSMUST00000047835 RbakQ8BQC8 711 aa19.33■□□□□ 0.69
Scaf11-201ENSMUST00000047835 Ophn1Q99J31 802 aa19.33■□□□□ 0.69
Scaf11-201ENSMUST00000047835 Wnt10bP48614 389 aa19.33■□□□□ 0.68
Scaf11-201ENSMUST00000047835 SpoplQ2M2N2 392 aa19.33■□□□□ 0.68
Scaf11-201ENSMUST00000047835 Arhgap17Q3UIA2 846 aa19.33■□□□□ 0.68
Scaf11-201ENSMUST00000047835 Tbc1d1Q60949 1255 aa19.33■□□□□ 0.68
Scaf11-201ENSMUST00000047835 Foxn1Q61575 648 aa19.33■□□□□ 0.68
Scaf11-201ENSMUST00000047835 Szrd1Q6NXN1 152 aa19.33■□□□□ 0.68
Scaf11-201ENSMUST00000047835 Raver2Q7TPD6 673 aa19.33■□□□□ 0.68
Scaf11-201ENSMUST00000047835 Anxa13Q99JG3 317 aa19.33■□□□□ 0.68
Scaf11-201ENSMUST00000047835 Prl3b1P09586 222 aa19.33■□□□□ 0.68
Scaf11-201ENSMUST00000047835 Syt2P46097 422 aa19.33■□□□□ 0.68
Scaf11-201ENSMUST00000047835 Pfdn4Q3UWL8 134 aa19.33■□□□□ 0.68
Scaf11-201ENSMUST00000047835 Utp14bQ6EJB6 756 aaKnown RBP19.33■□□□□ 0.68
Scaf11-201ENSMUST00000047835 Ccnt2Q7TQK0 723 aa19.33■□□□□ 0.68
Scaf11-201ENSMUST00000047835 Heatr3Q8BQM4 679 aa19.33■□□□□ 0.68
Scaf11-201ENSMUST00000047835 Pcdhb11Q91UZ8 797 aa19.33■□□□□ 0.68
Scaf11-201ENSMUST00000047835 Znf654Q9DAU9 571 aa19.33■□□□□ 0.68
Scaf11-201ENSMUST00000047835 Tjap1Q9DCD5 539 aa19.33■□□□□ 0.68
Scaf11-201ENSMUST00000047835 Vnn1Q9Z0K8 512 aa19.33■□□□□ 0.68
Scaf11-201ENSMUST00000047835 St13Q99L47 371 aaKnown RBP19.32■□□□□ 0.68
Scaf11-201ENSMUST00000047835 KynuQ9CXF0 464 aa19.32■□□□□ 0.68
Scaf11-201ENSMUST00000047835 PfkpQ9WUA3 784 aaKnown RBP19.32■□□□□ 0.68
Scaf11-201ENSMUST00000047835 Nccrp1G3X9C2 266 aa19.32■□□□□ 0.68
Scaf11-201ENSMUST00000047835 Mcf2lQ64096 1149 aa19.32■□□□□ 0.68
Scaf11-201ENSMUST00000047835 Ppp2r2aQ6P1F6 447 aa19.32■□□□□ 0.68
Retrieved 100 of 22,080 RNA–protein pairs in 18.9 ms