RNA–Protein interactions for RNA: ENSMUST00000038188.13

Limch1-201, Transcript of LIM and calponin homology domains-containing protein 1, mousemouse

TSL 1 (best) BASIC

Gene Limch1, Length 5,903 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Limch1-201ENSMUST00000038188 OgtQ8CGY8 1046 aa11.22□□□□□ -0.61
Limch1-201ENSMUST00000038188 Zscan4-ps2A0A1C7CYU6 506 aa11.22□□□□□ -0.61
Limch1-201ENSMUST00000038188 Mgat1P27808 447 aa11.22□□□□□ -0.61
Limch1-201ENSMUST00000038188 Akt1P31750 480 aa11.22□□□□□ -0.61
Limch1-201ENSMUST00000038188 Tgfbrap1Q3UR70 860 aa11.22□□□□□ -0.61
Limch1-201ENSMUST00000038188 Usp28Q5I043 1051 aa11.22□□□□□ -0.61
Limch1-201ENSMUST00000038188 Srd5a1Q68FF9 255 aa11.22□□□□□ -0.61
Limch1-201ENSMUST00000038188 Fastkd1Q6DI86 829 aa11.22□□□□□ -0.61
Limch1-201ENSMUST00000038188 Trmt10aQ8C1Z8 328 aaKnown RBP11.22□□□□□ -0.61
Limch1-201ENSMUST00000038188 Dcaf6Q9DC22 876 aa11.22□□□□□ -0.61
Limch1-201ENSMUST00000038188 Inpp4aQ9EPW0 939 aa11.22□□□□□ -0.61
Limch1-201ENSMUST00000038188 Erap1Q9EQH2 930 aa11.22□□□□□ -0.61
Limch1-201ENSMUST00000038188 Kank3Q9Z1P7 791 aa11.22□□□□□ -0.61
Limch1-201ENSMUST00000038188 D430041D05RikF6ZGR6 1678 aa11.22□□□□□ -0.61
Limch1-201ENSMUST00000038188 Serpina3jD3Z451 420 aa11.21□□□□□ -0.61
Limch1-201ENSMUST00000038188 IkbkbO88351 757 aa11.21□□□□□ -0.61
Limch1-201ENSMUST00000038188 EnahQ03173 802 aa11.21□□□□□ -0.61
Limch1-201ENSMUST00000038188 Dpcr1Q3TNW5 500 aa11.21□□□□□ -0.61
Limch1-201ENSMUST00000038188 Itm2cQ91VK4 269 aa11.21□□□□□ -0.61
Limch1-201ENSMUST00000038188 Xpo4Q9ESJ0 1151 aa11.21□□□□□ -0.61
Limch1-201ENSMUST00000038188 Pde8aO88502 823 aa11.21□□□□□ -0.61
Limch1-201ENSMUST00000038188 Mpp3O88910 568 aa11.21□□□□□ -0.61
Limch1-201ENSMUST00000038188 Syn1O88935 706 aa11.21□□□□□ -0.61
Limch1-201ENSMUST00000038188 Stmn4P63042 189 aa11.21□□□□□ -0.61
Limch1-201ENSMUST00000038188 Afap1l2Q5DTU0 825 aa11.21□□□□□ -0.61
Limch1-201ENSMUST00000038188 Slc43a1Q8BSM7 564 aa11.21□□□□□ -0.61
Limch1-201ENSMUST00000038188 Pih1h3bQ8C6P5 218 aa11.21□□□□□ -0.61
Limch1-201ENSMUST00000038188 Scrn2Q8VCA8 425 aa11.21□□□□□ -0.61
Limch1-201ENSMUST00000038188 Gtf2h3Q8VD76 309 aa11.21□□□□□ -0.61
Limch1-201ENSMUST00000038188 Rprd1aQ8VDS4 312 aa11.21□□□□□ -0.61
Limch1-201ENSMUST00000038188 RnmtQ9D0L8 465 aaKnown RBP11.21□□□□□ -0.61
Limch1-201ENSMUST00000038188 Mgea5Q9EQQ9 916 aa11.21□□□□□ -0.61
Limch1-201ENSMUST00000038188 Hyou1Q9JKR6 999 aaKnown RBP11.21□□□□□ -0.61
Limch1-201ENSMUST00000038188 Btbd19S4R1I0 287 aa11.21□□□□□ -0.61
Limch1-201ENSMUST00000038188 Chd2E9PZM4 1827 aaKnown RBP11.21□□□□□ -0.61
Limch1-201ENSMUST00000038188 Mocs3A2BDX3 460 aaKnown RBP11.21□□□□□ -0.62
Limch1-201ENSMUST00000038188 Fen1P39749 378 aa11.21□□□□□ -0.62
Limch1-201ENSMUST00000038188 Zhx1P70121 873 aa11.21□□□□□ -0.62
Limch1-201ENSMUST00000038188 Rhox12Q4TU81 186 aa11.21□□□□□ -0.62
Limch1-201ENSMUST00000038188 Anks6Q6GQX6 883 aa11.21□□□□□ -0.62
Limch1-201ENSMUST00000038188 Trim37Q6PCX9 961 aa11.21□□□□□ -0.62
Limch1-201ENSMUST00000038188 Vps37bQ8R0J7 285 aa11.21□□□□□ -0.62
Limch1-201ENSMUST00000038188 Sgpl1Q8R0X7 568 aa11.21□□□□□ -0.62
Limch1-201ENSMUST00000038188 Cyp2c70Q91W64 489 aa11.21□□□□□ -0.62
Limch1-201ENSMUST00000038188 Trpv6Q91WD2 767 aa11.21□□□□□ -0.62
Limch1-201ENSMUST00000038188 Tm4sf4Q91XD3 202 aa11.21□□□□□ -0.62
Limch1-201ENSMUST00000038188 Smg9Q9DB90 520 aa11.21□□□□□ -0.62
Limch1-201ENSMUST00000038188 Fkbp1bQ9Z2I2 108 aa11.21□□□□□ -0.62
Limch1-201ENSMUST00000038188 Rexo5D3YW29 759 aa11.21□□□□□ -0.62
Limch1-201ENSMUST00000038188 Nptx2O70340 429 aa11.21□□□□□ -0.62
Limch1-201ENSMUST00000038188 Ext2P70428 718 aa11.21□□□□□ -0.62
Limch1-201ENSMUST00000038188 IdsQ08890 552 aa11.21□□□□□ -0.62
Limch1-201ENSMUST00000038188 Gse1Q3U3C9 1213 aa11.21□□□□□ -0.62
Limch1-201ENSMUST00000038188 Brip1Q5SXJ3 1174 aa11.21□□□□□ -0.62
Limch1-201ENSMUST00000038188 Slc26a2Q62273 739 aa11.21□□□□□ -0.62
Limch1-201ENSMUST00000038188 Tdpoz2Q717B2 364 aa11.21□□□□□ -0.62
Limch1-201ENSMUST00000038188 Slc26a7Q8R2Z3 656 aa11.21□□□□□ -0.62
Limch1-201ENSMUST00000038188 Get4Q9D1H7 327 aa11.21□□□□□ -0.62
Limch1-201ENSMUST00000038188 Rap1gapA2ALS5 663 aa11.2□□□□□ -0.62
Limch1-201ENSMUST00000038188 Dennd5bA2RSQ0 1274 aa11.2□□□□□ -0.62
Limch1-201ENSMUST00000038188 Wdr72D3YYM4 1114 aa11.2□□□□□ -0.62
Limch1-201ENSMUST00000038188 Gm6588E9Q3K0 461 aa11.2□□□□□ -0.62
Limch1-201ENSMUST00000038188 UncxO08934 530 aa11.2□□□□□ -0.62
Limch1-201ENSMUST00000038188 PrlrQ08501 608 aa11.2□□□□□ -0.62
Limch1-201ENSMUST00000038188 Srbd1Q497V5 1015 aaKnown RBP11.2□□□□□ -0.62
Limch1-201ENSMUST00000038188 Fnbp1Q80TY0 616 aa11.2□□□□□ -0.62
Limch1-201ENSMUST00000038188 NcdnQ9Z0E0 729 aa11.2□□□□□ -0.62
Limch1-201ENSMUST00000038188 Rgs12Q8CGE9 1381 aa11.2□□□□□ -0.62
Limch1-201ENSMUST00000038188 Gm45261A0A1B0GSP6 197 aa11.2□□□□□ -0.62
Limch1-201ENSMUST00000038188 Slc45a1Q8BIV7 751 aa11.2□□□□□ -0.62
Limch1-201ENSMUST00000038188 Rhpn2Q8BWR8 686 aa11.2□□□□□ -0.62
Limch1-201ENSMUST00000038188 Rxfp2Q91ZZ5 737 aa11.2□□□□□ -0.62
Limch1-201ENSMUST00000038188 Xpo6Q924Z6 1125 aa11.2□□□□□ -0.62
Limch1-201ENSMUST00000038188 Rilpl2Q99LE1 197 aa11.2□□□□□ -0.62
Limch1-201ENSMUST00000038188 Micu3Q9CTY5 523 aa11.2□□□□□ -0.62
Limch1-201ENSMUST00000038188 Vps28Q9D1C8 221 aa11.2□□□□□ -0.62
Limch1-201ENSMUST00000038188 Ndst4Q9EQW8 872 aa11.2□□□□□ -0.62
Limch1-201ENSMUST00000038188 Gm5814J3QP80 125 aa11.2□□□□□ -0.62
Limch1-201ENSMUST00000038188 PnmtP40935 295 aa11.2□□□□□ -0.62
Limch1-201ENSMUST00000038188 Nhej1Q3KNJ2 295 aa11.2□□□□□ -0.62
Limch1-201ENSMUST00000038188 DmgdhQ9DBT9 869 aa11.2□□□□□ -0.62
Limch1-201ENSMUST00000038188 Tbx18Q9EPZ6 613 aa11.2□□□□□ -0.62
Limch1-201ENSMUST00000038188 Slc15a2Q9ES07 729 aa11.2□□□□□ -0.62
Limch1-201ENSMUST00000038188 MkksQ9JI70 570 aa11.2□□□□□ -0.62
Limch1-201ENSMUST00000038188 Bfsp1A2AMT1 669 aa11.2□□□□□ -0.62
Limch1-201ENSMUST00000038188 Vmn2r71L7N2D8 855 aa11.2□□□□□ -0.62
Limch1-201ENSMUST00000038188 Kcnh2O35219 1162 aa11.2□□□□□ -0.62
Limch1-201ENSMUST00000038188 IapP03975 557 aa11.2□□□□□ -0.62
Limch1-201ENSMUST00000038188 Specc1lQ2KN98 1118 aaKnown RBP11.2□□□□□ -0.62
Limch1-201ENSMUST00000038188 Ap5z1Q3U829 807 aa11.2□□□□□ -0.62
Limch1-201ENSMUST00000038188 Pip5kl1Q6U7H8 395 aa11.2□□□□□ -0.62
Limch1-201ENSMUST00000038188 Ppfia2Q8BSS9 1257 aa11.2□□□□□ -0.62
Limch1-201ENSMUST00000038188 Fthl17aQ9DAX0 182 aa11.2□□□□□ -0.62
Limch1-201ENSMUST00000038188 Dkc1Q9ESX5 509 aaKnown RBP11.2□□□□□ -0.62
Limch1-201ENSMUST00000038188 Syt5Q9R0N5 386 aa11.2□□□□□ -0.62
Limch1-201ENSMUST00000038188 Klhl41A2AUC9 606 aa11.2□□□□□ -0.62
Limch1-201ENSMUST00000038188 Exosc10P56960 887 aaKnown RBP11.2□□□□□ -0.62
Limch1-201ENSMUST00000038188 Tbx1P70323 479 aa11.2□□□□□ -0.62
Limch1-201ENSMUST00000038188 Fam107bQ3TGF2 131 aa11.2□□□□□ -0.62
Limch1-201ENSMUST00000038188 Atg16l2Q6KAU8 623 aa11.2□□□□□ -0.62
Retrieved 100 of 22,080 RNA–protein pairs in 61.9 ms