RNA–Protein interactions for RNA: ENSMUST00000035164.9

Topbp1-201, Transcript of DNA topoisomerase 2-binding protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Topbp1, Length 5,224 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Topbp1-201ENSMUST00000035164 Vwa5b1A9Z1V5 1215 aa11.96□□□□□ -0.49
Topbp1-201ENSMUST00000035164 Ildr2B5TVM2 661 aa11.96□□□□□ -0.49
Topbp1-201ENSMUST00000035164 Fam92bQ3V2J0 292 aa11.96□□□□□ -0.49
Topbp1-201ENSMUST00000035164 Kif11Q6P9P6 1052 aa11.96□□□□□ -0.49
Topbp1-201ENSMUST00000035164 Atl2Q6PA06 583 aa11.96□□□□□ -0.49
Topbp1-201ENSMUST00000035164 Pip5kl1Q6U7H8 395 aa11.96□□□□□ -0.49
Topbp1-201ENSMUST00000035164 Tbc1d10cQ8C9V1 444 aa11.96□□□□□ -0.49
Topbp1-201ENSMUST00000035164 Dcaf8Q8N7N5 591 aa11.96□□□□□ -0.49
Topbp1-201ENSMUST00000035164 Trex1Q91XB0 314 aa11.96□□□□□ -0.49
Topbp1-201ENSMUST00000035164 Tfr2Q9JKX3 798 aa11.96□□□□□ -0.49
Topbp1-201ENSMUST00000035164 Tlr5Q9JLF7 859 aa11.96□□□□□ -0.49
Topbp1-201ENSMUST00000035164 Cul3Q9JLV5 768 aa11.96□□□□□ -0.49
Topbp1-201ENSMUST00000035164 Heatr4E9Q357 955 aa11.96□□□□□ -0.49
Topbp1-201ENSMUST00000035164 Tp53P02340 387 aa11.96□□□□□ -0.49
Topbp1-201ENSMUST00000035164 RalgdsQ03385 852 aa11.96□□□□□ -0.49
Topbp1-201ENSMUST00000035164 Frmd8Q3UFK8 466 aa11.96□□□□□ -0.49
Topbp1-201ENSMUST00000035164 Rhbdf1Q6PIX5 856 aa11.96□□□□□ -0.49
Topbp1-201ENSMUST00000035164 Fbxo28Q8BIG4 368 aa11.96□□□□□ -0.49
Topbp1-201ENSMUST00000035164 AgpsQ8C0I1 645 aa11.96□□□□□ -0.49
Topbp1-201ENSMUST00000035164 Apol7cQ8C6E1 369 aa11.96□□□□□ -0.49
Topbp1-201ENSMUST00000035164 Slc12a8Q8VI23 705 aa11.96□□□□□ -0.49
Topbp1-201ENSMUST00000035164 Usp26Q99MX1 835 aa11.96□□□□□ -0.49
Topbp1-201ENSMUST00000035164 Smyd3Q9CWR2 428 aa11.96□□□□□ -0.49
Topbp1-201ENSMUST00000035164 Jag1Q9QXX0 1218 aa11.96□□□□□ -0.49
Topbp1-201ENSMUST00000035164 Dach1Q9QYB2 751 aa11.96□□□□□ -0.49
Topbp1-201ENSMUST00000035164 Ccnyl1D3YUJ3 367 aa11.96□□□□□ -0.5
Topbp1-201ENSMUST00000035164 Gm3415J3QMS8 315 aa11.96□□□□□ -0.5
Topbp1-201ENSMUST00000035164 UrosP51163 265 aa11.96□□□□□ -0.5
Topbp1-201ENSMUST00000035164 Serping1P97290 504 aa11.96□□□□□ -0.5
Topbp1-201ENSMUST00000035164 Brinp3Q499E0 766 aa11.96□□□□□ -0.5
Topbp1-201ENSMUST00000035164 Kiaa0391Q8JZY4 584 aaKnown RBP11.96□□□□□ -0.5
Topbp1-201ENSMUST00000035164 Dync1li1Q8R1Q8 523 aa11.96□□□□□ -0.5
Topbp1-201ENSMUST00000035164 Defb15Q8R2I5 79 aa11.96□□□□□ -0.5
Topbp1-201ENSMUST00000035164 Med24Q99K74 987 aa11.96□□□□□ -0.5
Topbp1-201ENSMUST00000035164 Gm3404Q9D506 307 aa11.96□□□□□ -0.5
Topbp1-201ENSMUST00000035164 Ttc33Q9D6K7 262 aa11.96□□□□□ -0.5
Topbp1-201ENSMUST00000035164 1700016D06RikQ9DAA5 166 aa11.96□□□□□ -0.5
Topbp1-201ENSMUST00000035164 Slc22a3Q9WTW5 551 aa11.96□□□□□ -0.5
Topbp1-201ENSMUST00000035164 Glt1d1A4FUP9 346 aa11.95□□□□□ -0.5
Topbp1-201ENSMUST00000035164 Pias1O88907 651 aa11.95□□□□□ -0.5
Topbp1-201ENSMUST00000035164 Amhr2Q8K592 568 aa11.95□□□□□ -0.5
Topbp1-201ENSMUST00000035164 St13Q99L47 371 aaKnown RBP11.95□□□□□ -0.5
Topbp1-201ENSMUST00000035164 Cdk5rap3Q99LM2 503 aa11.95□□□□□ -0.5
Topbp1-201ENSMUST00000035164 Wars2Q9CYK1 360 aa11.95□□□□□ -0.5
Topbp1-201ENSMUST00000035164 Rnf6Q9DBU5 667 aa11.95□□□□□ -0.5
Topbp1-201ENSMUST00000035164 Jph2Q9ET78 696 aa11.95□□□□□ -0.5
Topbp1-201ENSMUST00000035164 Hs6st3Q9QYK4 470 aa11.95□□□□□ -0.5
Topbp1-201ENSMUST00000035164 Clrn2B2RVW2 232 aa11.95□□□□□ -0.5
Topbp1-201ENSMUST00000035164 CenpaO35216 134 aa11.95□□□□□ -0.5
Topbp1-201ENSMUST00000035164 Meis2P97367 477 aa11.95□□□□□ -0.5
Topbp1-201ENSMUST00000035164 Rnf113a2Q14B01 337 aa11.95□□□□□ -0.5
Topbp1-201ENSMUST00000035164 R3hdm4Q4VBF2 262 aa11.95□□□□□ -0.5
Topbp1-201ENSMUST00000035164 FancbQ5XJY6 703 aa11.95□□□□□ -0.5
Topbp1-201ENSMUST00000035164 Apbb1ipQ8R5A3 670 aa11.95□□□□□ -0.5
Topbp1-201ENSMUST00000035164 Psmd9Q9CR00 222 aa11.95□□□□□ -0.5
Topbp1-201ENSMUST00000035164 Akt1s1Q9D1F4 257 aa11.95□□□□□ -0.5
Topbp1-201ENSMUST00000035164 Trim42Q9D2H5 723 aa11.95□□□□□ -0.5
Topbp1-201ENSMUST00000035164 Rassf7Q9DD19 359 aa11.95□□□□□ -0.5
Topbp1-201ENSMUST00000035164 Zfp94E9Q6Y4 486 aa11.95□□□□□ -0.5
Topbp1-201ENSMUST00000035164 MyocO70624 490 aa11.95□□□□□ -0.5
Topbp1-201ENSMUST00000035164 Mpp3O88910 568 aa11.95□□□□□ -0.5
Topbp1-201ENSMUST00000035164 Krt13P08730 437 aa11.95□□□□□ -0.5
Topbp1-201ENSMUST00000035164 Slc3a2P10852 526 aaKnown RBP11.95□□□□□ -0.5
Topbp1-201ENSMUST00000035164 Slc1a1P51906 523 aa11.95□□□□□ -0.5
Topbp1-201ENSMUST00000035164 Hmgb4Q6P8W9 181 aa11.95□□□□□ -0.5
Topbp1-201ENSMUST00000035164 Fbxo10Q7TQF2 950 aa11.95□□□□□ -0.5
Topbp1-201ENSMUST00000035164 Atxn2lQ7TQH0 1049 aaKnown RBP11.95□□□□□ -0.5
Topbp1-201ENSMUST00000035164 Crybg3Q80W49 1005 aa11.95□□□□□ -0.5
Topbp1-201ENSMUST00000035164 Q80ZQ3 298 aa11.95□□□□□ -0.5
Topbp1-201ENSMUST00000035164 Neto2Q8BNJ6 525 aa11.95□□□□□ -0.5
Topbp1-201ENSMUST00000035164 Rfx6Q8C7R7 927 aa11.95□□□□□ -0.5
Topbp1-201ENSMUST00000035164 Emilin2Q8K482 1074 aa11.95□□□□□ -0.5
Topbp1-201ENSMUST00000035164 Tceal1Q921P9 165 aa11.95□□□□□ -0.5
Topbp1-201ENSMUST00000035164 Rnf216P58283 853 aa11.95□□□□□ -0.5
Topbp1-201ENSMUST00000035164 Epas1P97481 874 aa11.95□□□□□ -0.5
Topbp1-201ENSMUST00000035164 Cdk16Q04735 496 aa11.95□□□□□ -0.5
Topbp1-201ENSMUST00000035164 Fam8a1Q3URQ4 399 aa11.95□□□□□ -0.5
Topbp1-201ENSMUST00000035164 Sfi1Q3UZY0 1216 aaKnown RBP11.95□□□□□ -0.5
Topbp1-201ENSMUST00000035164 Pla2g4eQ50L42 875 aa11.95□□□□□ -0.5
Topbp1-201ENSMUST00000035164 Peg10Q7TN75 958 aaKnown RBP11.95□□□□□ -0.5
Topbp1-201ENSMUST00000035164 Gramd1bQ80TI0 738 aa11.95□□□□□ -0.5
Topbp1-201ENSMUST00000035164 Ugt3a2Q8JZZ0 523 aa11.95□□□□□ -0.5
Topbp1-201ENSMUST00000035164 Pagr1aQ99L02 253 aa11.95□□□□□ -0.5
Topbp1-201ENSMUST00000035164 Taf7lQ9D3R9 471 aa11.95□□□□□ -0.5
Topbp1-201ENSMUST00000035164 Cyp2ab1S4R196 498 aa11.95□□□□□ -0.5
Topbp1-201ENSMUST00000035164 Fgf15O35622 218 aa11.94□□□□□ -0.5
Topbp1-201ENSMUST00000035164 ZfxP17012 799 aa11.94□□□□□ -0.5
Topbp1-201ENSMUST00000035164 Wdhd1P59328 1117 aa11.94□□□□□ -0.5
Topbp1-201ENSMUST00000035164 4930430A15RikQ05AC5 485 aa11.94□□□□□ -0.5
Topbp1-201ENSMUST00000035164 Pou6f1Q07916 301 aa11.94□□□□□ -0.5
Topbp1-201ENSMUST00000035164 Kctd8Q50H33 476 aa11.94□□□□□ -0.5
Topbp1-201ENSMUST00000035164 Scarf1Q5ND28 820 aa11.94□□□□□ -0.5
Topbp1-201ENSMUST00000035164 Rab34Q64008 259 aa11.94□□□□□ -0.5
Topbp1-201ENSMUST00000035164 Arhgap29Q8CGF1 1266 aa11.94□□□□□ -0.5
Topbp1-201ENSMUST00000035164 PnkpQ9JLV6 522 aaKnown RBP11.94□□□□□ -0.5
Topbp1-201ENSMUST00000035164 Trpc3Q9QZC1 836 aa11.94□□□□□ -0.5
Topbp1-201ENSMUST00000035164 A630010A05RikA9C473 232 aa11.94□□□□□ -0.5
Topbp1-201ENSMUST00000035164 Cyp2b9P12790 491 aa11.94□□□□□ -0.5
Topbp1-201ENSMUST00000035164 9130409I23RikQ3TS87 320 aa11.94□□□□□ -0.5
Topbp1-201ENSMUST00000035164 Zfp120Q8BZW4 436 aa11.94□□□□□ -0.5
Retrieved 100 of 22,080 RNA–protein pairs in 32.3 ms